Os07g0694000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phospholipase C (Fragment).
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Os07g0694000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phospholipase C (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.53 | 0.284 | 12.7 | -0.076 | 0.212 | 0.967 | 0.655 | 0.21 | 0.468 | 3.16 | 20.51 | 8 | -- | -- |
| 36.4 | 0.281 | 12.7 | -0.0809 | 0.232 | 0.948 | 0.835 | -- | 0.462 | 2.75 | 20.35 | 5 | -- | -- |
| 37.2 | 0.284 | 12.7 | -0.0766 | 0.245 | 0.931 | -- | 0.541 | 0.462 | 2.5 | 20.55 | 5 | -- | -- |
| 38.76 | 0.29 | 12.7 | -0.0972 | 0.234 | 0.948 | -- | -- | 0.46 | 2.69 | 20.61 | 5 | -- | -- |
| 38.94 | 0.291 | 12.7 | -0.0682 | -- | 1.08 | -- | 0.535 | 0.468 | -- | 20.56 | 7 | -- | -- |
| 52.68 | 0.34 | 12.7 | -0.0941 | 1.15 | -- | 0.747 | -- | 0.462 | 0.503 | -- | -- | -- | -- |
| 55.07 | 0.348 | 12.7 | -0.122 | 1.15 | -- | -- | -- | 0.458 | 0.466 | -- | -- | -- | -- |
| 40.42 | 0.296 | 12.7 | -0.0885 | -- | 1.08 | -- | -- | 0.464 | -- | 20.55 | 5 | -- | -- |
| 39 | 0.291 | 12.7 | -- | 0.233 | 0.951 | -- | -- | 0.471 | 2.66 | 20.85 | 5 | -- | -- |
| 137.7 | 0.548 | 12.7 | -0.0829 | -- | -- | -- | -- | 0.477 | -- | -- | -- | -- | -- |
| 55.46 | 0.348 | 12.7 | -- | 1.15 | -- | -- | -- | 0.472 | 0.461 | -- | -- | -- | -- |
| 40.63 | 0.297 | 12.7 | -- | -- | 1.09 | -- | -- | 0.474 | -- | 20.61 | 5 | -- | -- |
| 137.89 | 0.548 | 12.7 | -- | -- | -- | -- | -- | 0.486 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.18 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 3 | 17 |
| 11 | 35.94 | radiation | 10.0 | 10 | < th | dose dependent | sin | 23 | NA |
| 12 | 35.98 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 3 | 19 |
| 19 | 36.19 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 24 | 19 |
| 20 | 36.20 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 21 | 36.22 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 38 | 36.43 | radiation | 10.0 | 90 | < th | dose dependent | sin | 0 | NA |
| 39 | 36.43 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 47 | 36.51 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 89 | 36.92 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 93 | 36.95 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 107 | 37.06 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 108 | 37.07 | radiation | 20.0 | 10 | < th | dose dependent | no | NA | NA |
| 140 | 37.35 | radiation | 20.0 | 10 | < th | dose independent | rect. | 3 | 19 |
| 158 | 37.47 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 183 | 37.61 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 185 | 37.61 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 211 | 37.73 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 225 | 37.81 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 233 | 37.84 | humidity | 80.0 | 10 | > th | dose independent | rect. | 3 | 17 |
| 258 | 37.94 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 3 | 18 |
| 290 | 38.12 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 300 | 38.16 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 367 | 38.42 | radiation | 1.0 | 30 | > th | dose independent | sin | 0 | NA |
| 425 | 38.64 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 24 | 10 |
| 438 | 38.69 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 3 | 17 |
| 461 | 38.75 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 466 | 38.76 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 472 | 38.78 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 3 | 19 |
| 483 | 38.80 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 506 | 38.87 | radiation | 1.0 | 30 | < th | dose independent | sin | 0 | NA |
| 518 | 38.90 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 524 | 38.91 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 542 | 38.93 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 12 | 10 |
| 549 | 38.95 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 9 |
| 687 | 39.29 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 692 | 39.32 | humidity | 80.0 | 10 | > th | dose independent | rect. | 3 | 15 |
| 701 | 39.35 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 11 | 8 |
| 750 | 39.44 | radiation | 20.0 | 10 | < th | dose independent | rect. | 13 | 9 |
| 759 | 39.46 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 781 | 39.50 | radiation | 20.0 | 90 | < th | dose independent | rect. | 23 | 23 |
| 789 | 39.51 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 6 |
| 790 | 39.51 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 791 | 39.51 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 828 | 39.59 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 833 | 39.60 | humidity | 70.0 | 10 | > th | dose dependent | sin | 1 | NA |
| 871 | 39.67 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 879 | 39.69 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 10 |
| 880 | 39.69 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 10 |
| 899 | 39.73 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 930 | 39.79 | humidity | 60.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 937 | 39.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 938 | 39.80 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 940 | 39.80 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 941 | 39.80 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 948 | 39.80 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 951 | 39.80 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 957 | 39.81 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 971 | 39.83 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 13 | 6 |
| 995 | 39.88 | temperature | 15.0 | 90 | > th | dose independent | rect. | 3 | 18 |