Os12g0562400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phospholipase C (Fragment).
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Os12g0562400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phospholipase C (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.44 | 0.374 | 7.87 | 1.59 | 0.984 | 9.98 | -1.12 | 50.1 | 0.16 | 10 | 5 | 90 | 2 | 1 |
| 125.29 | 0.521 | 7.74 | 1.71 | 1.03 | 6.17 | 0.234 | -- | 0.4 | 9.49 | 3.3 | 209 | 2.52 | 0.0165 |
| 69.36 | 0.388 | 7.87 | 1.55 | 0.991 | 9.99 | -- | 50.2 | 0.157 | 9.95 | 4.998 | 92 | 2 | 1.02 |
| 107.93 | 0.484 | 7.87 | 1.41 | 1.01 | 4.2 | -- | -- | 0.137 | 8.9 | 3.943 | 125 | 2.57 | 0.006 |
| 128.48 | 0.528 | 7.87 | 1.54 | -- | 10 | -- | 50.3 | 0.162 | -- | 4.999 | 91 | 2.01 | 1.03 |
| 122.61 | 0.519 | 7.86 | 1.57 | 0.986 | -- | -1.14 | -- | 0.152 | 9.9 | -- | -- | -- | -- |
| 127.52 | 0.529 | 7.86 | 1.52 | 0.996 | -- | -- | -- | 0.148 | 9.71 | -- | -- | -- | -- |
| 161.31 | 0.592 | 7.88 | 1.49 | -- | 3.56 | -- | -- | 0.167 | -- | 4.09 | 130 | 2.47 | 0.0954 |
| 161.67 | 0.592 | 7.89 | -- | 0.986 | 3.68 | -- | -- | 0.00112 | 9.85 | 4.529 | 142 | 2.44 | 0.0307 |
| 186.51 | 0.638 | 7.88 | 1.51 | -- | -- | -- | -- | 0.15 | -- | -- | -- | -- | -- |
| 188.37 | 0.642 | 7.9 | -- | 0.993 | -- | -- | -- | -0.0211 | 9.6 | -- | -- | -- | -- |
| 219.82 | 0.691 | 7.92 | -- | -- | 3.68 | -- | -- | 0.00253 | -- | 4.496 | 151 | 2.42 | 0.0913 |
| 246.68 | 0.733 | 7.92 | -- | -- | -- | -- | -- | -0.018 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.44 | wind | 5.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 2 | 64.45 | wind | 5.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 6 | 80.25 | wind | 5.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 11 | 81.58 | wind | 5.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 15 | 83.01 | wind | 5.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 31 | 85.85 | wind | 5.0 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 61 | 90.10 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 1 |
| 62 | 90.10 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 1 |
| 170 | 96.75 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 237 | 102.19 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 24 | 4 |
| 246 | 103.21 | temperature | 20.0 | 30 | < th | dose independent | rect. | 3 | 1 |
| 325 | 106.97 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 20 | 3 |
| 326 | 106.97 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 346 | 107.76 | wind | 5.0 | 270 | > th | dose independent | sin | 10 | NA |
| 376 | 108.34 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 20 | 1 |
| 378 | 108.34 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 408 | 108.73 | wind | 3.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 412 | 108.80 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 24 | 5 |
| 435 | 109.05 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 491 | 109.50 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 3 | 1 |
| 538 | 109.72 | temperature | 20.0 | 30 | < th | dose independent | rect. | 3 | 13 |
| 566 | 109.81 | temperature | 20.0 | 30 | < th | dose independent | rect. | 3 | 11 |
| 601 | 109.95 | temperature | 20.0 | 30 | < th | dose independent | rect. | 3 | 9 |
| 829 | 110.90 | temperature | 20.0 | 30 | < th | dose independent | rect. | 3 | 19 |
| 849 | 111.04 | wind | 5.0 | 720 | < th | dose independent | rect. | 23 | 10 |
| 924 | 111.53 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 23 | 5 |
| 927 | 111.57 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 24 | 3 |