BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0562400 Os12g0562400|AJ276277
(278 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G08510.1 | chr3:2582626-2585556 REVERSE LENGTH=582 411 e-115
AT2G40116.1 | chr2:16751782-16754311 FORWARD LENGTH=614 408 e-114
AT5G58700.1 | chr5:23713144-23716057 REVERSE LENGTH=598 401 e-112
AT3G55940.1 | chr3:20747787-20750184 FORWARD LENGTH=585 398 e-111
AT5G58690.1 | chr5:23709676-23712030 REVERSE LENGTH=579 370 e-103
AT5G58670.1 | chr5:23704457-23706751 REVERSE LENGTH=562 347 3e-96
AT4G38530.1 | chr4:18020708-18022898 FORWARD LENGTH=565 317 5e-87
AT3G47290.1 | chr3:17420606-17423329 FORWARD LENGTH=532 249 1e-66
AT3G47220.1 | chr3:17388119-17390443 FORWARD LENGTH=532 237 5e-63
>AT3G08510.1 | chr3:2582626-2585556 REVERSE LENGTH=582
Length = 581
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 182/267 (68%), Positives = 222/267 (83%)
Query: 12 EYRELITIHAGKPKGHLKDALKVDPDKVRRLSLSETQLAKATASHGADVIRFTQKNILRV 71
+Y+ LI IHAGKPKG + + LKVDPDKVRRLSLSE QL KA + ++RFTQ N+LR+
Sbjct: 315 QYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSEEQLEKAAEKYAKQIVRFTQHNLLRI 374
Query: 72 YPKGTRINSSNYDPMNAWTHGAQMVAFNMQGHDKALRLMQGFFRANGGCGYVKKPDFLLR 131
YPKGTR+ SSNY+P+ W+HGAQMVAFNMQG+ ++L LMQG FRANGGCGY+KKPD LL+
Sbjct: 375 YPKGTRVTSSNYNPLVGWSHGAQMVAFNMQGYGRSLWLMQGMFRANGGCGYIKKPDLLLK 434
Query: 132 TGPNGEVFDPNASMPVKKTLKVKVYMGDGWRMDFSKTHFDTFSPPDFYTRVGIAGVRADC 191
+G + ++FDP A++PVK TL+V VYMG+GW DF THFD +SPPDFYTRVGIAGV D
Sbjct: 435 SGSDSDIFDPKATLPVKTTLRVTVYMGEGWYFDFRHTHFDQYSPPDFYTRVGIAGVPGDT 494
Query: 192 VMKKTRTIEDQWVPMWDEEFTFPLTVPELAVLRIEVHEYDMSEKHDFGGQTCLPVSELKQ 251
VMKKT+T+ED W+P WDE F FPLTVPELA+LR+EVHEYDMSEK DFGGQTCLPV EL +
Sbjct: 495 VMKKTKTLEDNWIPAWDEVFEFPLTVPELALLRLEVHEYDMSEKDDFGGQTCLPVWELSE 554
Query: 252 GIRAVPLHDRRGTRYKSVRLLMRFDFL 278
GIRA PLH R+G +YKSV+LL++ +F+
Sbjct: 555 GIRAFPLHSRKGEKYKSVKLLVKVEFV 581
>AT2G40116.1 | chr2:16751782-16754311 FORWARD LENGTH=614
Length = 613
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 188/277 (67%), Positives = 228/277 (82%)
Query: 1 DDPKFQQETACEYRELITIHAGKPKGHLKDALKVDPDKVRRLSLSETQLAKATASHGADV 60
+D + ++ Y+ LITIHAGKPKG +K+ +KV DKVRRLSLSE +L + +S+ DV
Sbjct: 336 EDEEASEDQKPAYKRLITIHAGKPKGTVKEEMKVVVDKVRRLSLSEQELDRTCSSNSQDV 395
Query: 61 IRFTQKNILRVYPKGTRINSSNYDPMNAWTHGAQMVAFNMQGHDKALRLMQGFFRANGGC 120
+RFTQ+N+LR+YPKGTR NSSNY P+ WTHGAQM+AFNMQG+ K+L LM G FRANGGC
Sbjct: 396 VRFTQRNLLRIYPKGTRFNSSNYKPLIGWTHGAQMIAFNMQGYGKSLWLMHGMFRANGGC 455
Query: 121 GYVKKPDFLLRTGPNGEVFDPNASMPVKKTLKVKVYMGDGWRMDFSKTHFDTFSPPDFYT 180
GYVKKP+FL++ G + EVFDP +PVK+TLKVKVYMGDGWRMDFS THFD +SPPDFYT
Sbjct: 456 GYVKKPNFLMKKGFHDEVFDPRKKLPVKETLKVKVYMGDGWRMDFSHTHFDAYSPPDFYT 515
Query: 181 RVGIAGVRADCVMKKTRTIEDQWVPMWDEEFTFPLTVPELAVLRIEVHEYDMSEKHDFGG 240
++ I GV AD KKT+ IED W P+WDEEF+FPLTVPELA+LRIEV EYDMSEK DFGG
Sbjct: 516 KMFIVGVPADNAKKKTKIIEDNWYPIWDEEFSFPLTVPELALLRIEVREYDMSEKDDFGG 575
Query: 241 QTCLPVSELKQGIRAVPLHDRRGTRYKSVRLLMRFDF 277
QTCLPV+EL+ GIR+VPL+D++G + KSVRLLMRF F
Sbjct: 576 QTCLPVAELRPGIRSVPLYDKKGEKMKSVRLLMRFIF 612
>AT5G58700.1 | chr5:23713144-23716057 REVERSE LENGTH=598
Length = 597
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 187/278 (67%), Positives = 224/278 (80%), Gaps = 5/278 (1%)
Query: 6 QQETAC-----EYRELITIHAGKPKGHLKDALKVDPDKVRRLSLSETQLAKATASHGADV 60
+ +T+C EY+ LI IHAGKPKG L+ ALKVDP+K+RRLSLSE L KA AS+GADV
Sbjct: 320 ESDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRRLSLSEQLLEKAVASYGADV 379
Query: 61 IRFTQKNILRVYPKGTRINSSNYDPMNAWTHGAQMVAFNMQGHDKALRLMQGFFRANGGC 120
IRFTQKN LR+YPKGTR NSSNY P W GAQM+AFNMQG+ +AL LM+G FRANGGC
Sbjct: 380 IRFTQKNFLRIYPKGTRFNSSNYKPQIGWMSGAQMIAFNMQGYGRALWLMEGMFRANGGC 439
Query: 121 GYVKKPDFLLRTGPNGEVFDPNASMPVKKTLKVKVYMGDGWRMDFSKTHFDTFSPPDFYT 180
GYVKKPDFL+ PNG+ F P + KKTLKVKV MGDGW +DF KTHFD++SPPDF+
Sbjct: 440 GYVKKPDFLMDASPNGQDFYPKDNSSPKKTLKVKVCMGDGWLLDFKKTHFDSYSPPDFFV 499
Query: 181 RVGIAGVRADCVMKKTRTIEDQWVPMWDEEFTFPLTVPELAVLRIEVHEYDMSEKHDFGG 240
RVGIAG D VM+KT+ D W P+W++EFTFPL VPELA+LR+EVHE+D++EK DFGG
Sbjct: 500 RVGIAGAPVDEVMEKTKIEYDTWTPIWNKEFTFPLAVPELALLRVEVHEHDVNEKDDFGG 559
Query: 241 QTCLPVSELKQGIRAVPLHDRRGTRYKSVRLLMRFDFL 278
QTCLPVSE++QGIRAVPL +R+G +Y S RLLMRF+F+
Sbjct: 560 QTCLPVSEIRQGIRAVPLFNRKGVKYSSTRLLMRFEFV 597
>AT3G55940.1 | chr3:20747787-20750184 FORWARD LENGTH=585
Length = 584
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 183/275 (66%), Positives = 222/275 (80%), Gaps = 3/275 (1%)
Query: 4 KFQQETACEYRELITIHAGKPKGHLKDALKVDPDKVRRLSLSETQLAKATASHGADVIRF 63
K ++ EY+ LI I AGKPKG + + LKVDPDKVRRLSLSE QL KA+ + ++RF
Sbjct: 313 KIKKNAPPEYKHLIAIEAGKPKGGITECLKVDPDKVRRLSLSEEQLEKASEKYAKQIVRF 372
Query: 64 TQKNILRVYPKGTRINSSNYDPMNAWTHGAQMVAFNMQGHDKALRLMQGFFRANGGCGYV 123
TQ+N+LRVYPKGTRI SSNY+P+ AW+HGAQMVAFNMQG ++L +MQG FR NGGCGY+
Sbjct: 373 TQRNLLRVYPKGTRITSSNYNPLIAWSHGAQMVAFNMQGLGRSLWVMQGMFRGNGGCGYI 432
Query: 124 KKPDFLLRTGPNGEVFDPNASMPVKKTLKVKVYMGDGWRMDFSKTHFDTFSPPDFYTRVG 183
KKPD LL++ VFDP A++PVK TL+V +YMG+GW DF THFD +SPPDFYTRVG
Sbjct: 433 KKPDLLLKSN---AVFDPEATLPVKTTLRVTIYMGEGWYYDFPHTHFDRYSPPDFYTRVG 489
Query: 184 IAGVRADCVMKKTRTIEDQWVPMWDEEFTFPLTVPELAVLRIEVHEYDMSEKHDFGGQTC 243
IAGV AD VMKKT+T+ED W+P WDE F FPLTVPELA+LRIEVHEYDMSEK DFGGQ C
Sbjct: 490 IAGVPADTVMKKTKTLEDNWIPAWDEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQIC 549
Query: 244 LPVSELKQGIRAVPLHDRRGTRYKSVRLLMRFDFL 278
LPV EL+QGIRAVPL ++ G + +SV+LL+R +F+
Sbjct: 550 LPVWELRQGIRAVPLRNQDGVKCRSVKLLVRLEFV 584
>AT5G58690.1 | chr5:23709676-23712030 REVERSE LENGTH=579
Length = 578
Score = 370 bits (949), Expect = e-103, Method: Compositional matrix adjust.
Identities = 175/278 (62%), Positives = 211/278 (75%), Gaps = 4/278 (1%)
Query: 5 FQQETA----CEYRELITIHAGKPKGHLKDALKVDPDKVRRLSLSETQLAKATASHGADV 60
F QE++ Y LITI +G K LK+AL +D VRRLSL E + KAT +G +V
Sbjct: 301 FDQESSNLDFLTYSRLITIPSGNAKNGLKEALTIDNGGVRRLSLREQKFKKATEMYGTEV 360
Query: 61 IRFTQKNILRVYPKGTRINSSNYDPMNAWTHGAQMVAFNMQGHDKALRLMQGFFRANGGC 120
I+FTQKN+LR+YPK TR+NSSNY P N W +GAQMVAFNMQG+ +AL +M G FR NGGC
Sbjct: 361 IKFTQKNLLRIYPKATRVNSSNYRPYNGWMYGAQMVAFNMQGYGRALWMMHGMFRGNGGC 420
Query: 121 GYVKKPDFLLRTGPNGEVFDPNASMPVKKTLKVKVYMGDGWRMDFSKTHFDTFSPPDFYT 180
GYVKKPDF++ +GEVF+P A +P+KKTLKVKVYMG GW F +T F+T+S P+FYT
Sbjct: 421 GYVKKPDFMMNNNLSGEVFNPKAKLPIKKTLKVKVYMGKGWDSGFQRTCFNTWSSPNFYT 480
Query: 181 RVGIAGVRADCVMKKTRTIEDQWVPMWDEEFTFPLTVPELAVLRIEVHEYDMSEKHDFGG 240
RVGI GVR D VMKKT+ + W P W+EEF F LTVPELA+LRIEVH+Y+M EK DF G
Sbjct: 481 RVGITGVRGDKVMKKTKKEQKTWEPFWNEEFEFQLTVPELALLRIEVHDYNMPEKDDFSG 540
Query: 241 QTCLPVSELKQGIRAVPLHDRRGTRYKSVRLLMRFDFL 278
QTCLPVSEL+QGIR+VPL+DR+G R SV LLMRF FL
Sbjct: 541 QTCLPVSELRQGIRSVPLYDRKGERLVSVTLLMRFHFL 578
>AT5G58670.1 | chr5:23704457-23706751 REVERSE LENGTH=562
Length = 561
Score = 347 bits (891), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 159/268 (59%), Positives = 201/268 (75%), Gaps = 1/268 (0%)
Query: 9 TACEYRELITIHAGKPKGHLKDALKVDPDKVRRLSLSETQLAKATASHGADVIRFTQKNI 68
A EYR+LI+IHAG KG LK+ L DP++V RLS+SE L + G D+++FTQ+N+
Sbjct: 289 VAIEYRDLISIHAGNRKGGLKNCLNGDPNRVIRLSMSEQWLETLAKTRGPDLVKFTQRNL 348
Query: 69 LRVYPKGTRINSSNYDPMNAWTHGAQMVAFNMQGHDKALRLMQGFFRANGGCGYVKKPDF 128
LR++PK TR +SSNYDP+ W HGAQMVAFNMQ H + L +MQG F+ANGGCGYVKKPD
Sbjct: 349 LRIFPKTTRFDSSNYDPLVGWIHGAQMVAFNMQSHGRYLWMMQGMFKANGGCGYVKKPDV 408
Query: 129 LLRTGPNGEVFDP-NASMPVKKTLKVKVYMGDGWRMDFSKTHFDTFSPPDFYTRVGIAGV 187
LL GP GE+FDP + ++P+K TLKVK+Y G+GW MDF HFD +SPPDFY +VGIAGV
Sbjct: 409 LLSNGPEGEIFDPCSQNLPIKTTLKVKIYTGEGWNMDFPLDHFDRYSPPDFYAKVGIAGV 468
Query: 188 RADCVMKKTRTIEDQWVPMWDEEFTFPLTVPELAVLRIEVHEYDMSEKHDFGGQTCLPVS 247
D +T +D+W P+WD+EF FPL VPEL++L I V +YD + ++DF GQTC P+S
Sbjct: 469 PLDTASYRTEIDKDEWFPIWDKEFEFPLRVPELSLLCITVKDYDSNTQNDFAGQTCFPLS 528
Query: 248 ELKQGIRAVPLHDRRGTRYKSVRLLMRF 275
E++ GIRAV LHDR G YK VRLLMRF
Sbjct: 529 EVRPGIRAVRLHDRAGEVYKHVRLLMRF 556
>AT4G38530.1 | chr4:18020708-18022898 FORWARD LENGTH=565
Length = 564
Score = 317 bits (811), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 151/270 (55%), Positives = 189/270 (70%), Gaps = 4/270 (1%)
Query: 7 QETACEYRELITIHAGKPKGHLKDALKVDPDKVRRLSLSETQLAKATASHGADVIRFTQK 66
+ A YR+LI IHA K KD L DP+K R+S+ E L + G D++RFTQ+
Sbjct: 289 ESEAVGYRDLIAIHAANCKDPSKDCLSDDPEKPIRVSMDEQWLDTMVRTRGTDLVRFTQR 348
Query: 67 NILRVYPKGTRINSSNYDPMNAWTHGAQMVAFNMQGHDKALRLMQGFFRANGGCGYVKKP 126
N++R+YPKGTR++SSNYDP WTHGAQMVAFNMQGH K L +MQG FR NGGCGYVKKP
Sbjct: 349 NLVRIYPKGTRVDSSNYDPHVGWTHGAQMVAFNMQGHGKQLWIMQGMFRGNGGCGYVKKP 408
Query: 127 DFLLRTGPNGEVFDPNASMPVKKTLKVKVYMGDGWRMDFSKTHFDTFSPPDFYTRVGIAG 186
LL +FDP P+K TLKVK+Y G+GW +DF THFD +SPPDF+ ++GIAG
Sbjct: 409 RILLD---EHTLFDPCKRFPIKTTLKVKIYTGEGWDLDFHHTHFDQYSPPDFFVKIGIAG 465
Query: 187 VRADCVMKKTRTIEDQWVPMW-DEEFTFPLTVPELAVLRIEVHEYDMSEKHDFGGQTCLP 245
V D V +T T DQW P+W ++EF F L+VPELA+L +V +YD ++DF GQTCLP
Sbjct: 466 VPRDTVSYRTETAVDQWFPIWGNDEFLFQLSVPELALLWFKVQDYDNDTQNDFAGQTCLP 525
Query: 246 VSELKQGIRAVPLHDRRGTRYKSVRLLMRF 275
+ ELK G+RAV LHDR G YK+ RLL+ F
Sbjct: 526 LPELKSGVRAVRLHDRTGKAYKNTRLLVSF 555
>AT3G47290.1 | chr3:17420606-17423329 FORWARD LENGTH=532
Length = 531
Score = 249 bits (636), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/265 (48%), Positives = 165/265 (62%), Gaps = 13/265 (4%)
Query: 13 YRELITIHAGKPKGHLKDALKVDPDKVRRLSLSETQLAKATASHGADVIRFTQKNILRVY 72
Y+ L++ H +P+G L++ L +K++R ET D+I FTQK LR
Sbjct: 279 YQSLVSFHVVEPRGMLQNVLTGKANKIQRPGWYET-----------DIISFTQKRFLRTR 327
Query: 73 PKGTRINSSNYDPMNAWTHGAQMVAFNMQGHDKALRLMQGFFRANGGCGYVKKPDFLLRT 132
P+ + + Y P AW HGAQ++A + + + L LMQG FRANGGCGYVKKPDFLL
Sbjct: 328 PQRKLLIYAPYKPQRAWMHGAQLIALSRKEEKEKLWLMQGMFRANGGCGYVKKPDFLLNA 387
Query: 133 GPNGEVFDPNASMPVKKTLKVKVYMGDGWRMDFSKTHFDTFSPPDFYTRVGIAGVRADCV 192
GP+G VF P + V K LKVK+YMGDGW +DF K S PD Y R+ IAGV D
Sbjct: 388 GPSG-VFYPTVNPVVVKILKVKIYMGDGWIVDFKK-RIGRLSKPDLYVRISIAGVPHDEN 445
Query: 193 MKKTRTIEDQWVPMWDEEFTFPLTVPELAVLRIEVHEYDMSEKHDFGGQTCLPVSELKQG 252
+ KT ++W P W EEFTFPLT P+LA++ EV++Y++S F GQTCLPVSEL +G
Sbjct: 446 IMKTTVKNNEWTPTWGEEFTFPLTYPDLALISFEVYDYEVSTADAFCGQTCLPVSELIEG 505
Query: 253 IRAVPLHDRRGTRYKSVRLLMRFDF 277
IRAVPL+D RG S LL RF +
Sbjct: 506 IRAVPLYDERGKACSSTMLLTRFKW 530
>AT3G47220.1 | chr3:17388119-17390443 FORWARD LENGTH=532
Length = 531
Score = 237 bits (605), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 129/270 (47%), Positives = 161/270 (59%), Gaps = 17/270 (6%)
Query: 9 TACEYRELITIHAGKPKGHLKDALKVDPDKVRRLSLSETQLAKATASHGADVIRFTQKNI 68
T Y+ ++ HA +P+G L+ AL D + + DVI FTQ
Sbjct: 277 TDKNYQSVVGFHAVEPRGMLQKALTDD--------------VQQPGWYERDVISFTQNKF 322
Query: 69 LRVYPKGTRINSSN-YDPMNAWTHGAQMVAFNMQGHDKALRLMQGFFRANGGCGYVKKPD 127
LR PK + S+ Y P AW HGAQM+A + Q + L LMQG FRANGGCGYVKKP+
Sbjct: 323 LRTRPKKRNLLSNPPYKPQRAWMHGAQMIALSRQDDKEKLWLMQGMFRANGGCGYVKKPN 382
Query: 128 FLLRTGPNGEVFDPNASMPVKKTLKVKVYMGDGWRMDFSKTHFDTFSPPDFYTRVGIAGV 187
FLL G +G VF P + V KTLKVK+YMGDGW +DF K S PD Y R+ IAGV
Sbjct: 383 FLLNAGSSG-VFYPTENPVVVKTLKVKIYMGDGWIVDFKK-RIGRLSKPDLYVRISIAGV 440
Query: 188 RADCVMKKTRTIEDQWVPMWDEEFTFPLTVPELAVLRIEVHEYDMSEKHDFGGQTCLPVS 247
D + T ++W P W EEFTFPLT P+LA++ EV++Y++S F GQTCLPVS
Sbjct: 441 PHDEKIMNTTVKNNEWKPTWGEEFTFPLTYPDLALISFEVYDYEVSTPDYFCGQTCLPVS 500
Query: 248 ELKQGIRAVPLHDRRGTRYKSVRLLMRFDF 277
EL +GIRAVPL+D RG S LL RF +
Sbjct: 501 ELIEGIRAVPLYDERGKACSSTMLLTRFKW 530
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.138 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,371,944
Number of extensions: 268840
Number of successful extensions: 581
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 574
Number of HSP's successfully gapped: 9
Length of query: 278
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 181
Effective length of database: 8,447,217
Effective search space: 1528946277
Effective search space used: 1528946277
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 111 (47.4 bits)