BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0211400 Os03g0211400|AK070892
         (771 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os03g0211400  Calmodulin-binding, plant family protein           1394   0.0  
Os12g0506500  Galactokinase/homoserine kinase family protein       70   4e-12

>Os03g0211400 Calmodulin-binding, plant family protein
          Length = 771

 Score = 1394 bits (3607), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 697/771 (90%), Positives = 697/771 (90%)

Query: 1   MSKVLERRNXXXXXXXXXXXXXXRKDEKTTPHYLRASTGSCHNLCKYGHKNPFEEEKKLS 60
           MSKVLERRN              RKDEKTTPHYLRASTGSCHNLCKYGHKNPFEEEKKLS
Sbjct: 1   MSKVLERRNSFGGSTPTSSASGSRKDEKTTPHYLRASTGSCHNLCKYGHKNPFEEEKKLS 60

Query: 61  TSGGRRKKLPSHLNNLTLHRSAILDRSKDVRQRNLSLAKSSISLGESDRIAPKKTQANLK 120
           TSGGRRKKLPSHLNNLTLHRSAILDRSKDVRQRNLSLAKSSISLGESDRIAPKKTQANLK
Sbjct: 61  TSGGRRKKLPSHLNNLTLHRSAILDRSKDVRQRNLSLAKSSISLGESDRIAPKKTQANLK 120

Query: 121 GSSDHLITRTSSSADHKNVNLDGRKKHLTVAQKTSADSGSSNGVPKFDKKSAMPVKGTIV 180
           GSSDHLITRTSSSADHKNVNLDGRKKHLTVAQKTSADSGSSNGVPKFDKKSAMPVKGTIV
Sbjct: 121 GSSDHLITRTSSSADHKNVNLDGRKKHLTVAQKTSADSGSSNGVPKFDKKSAMPVKGTIV 180

Query: 181 PAKLKLAEMPQLEESRTMEKVTTVKQSSIKRPTSLPTKLNLIKQVPVPSQVSSHLLSSKA 240
           PAKLKLAEMPQLEESRTMEKVTTVKQSSIKRPTSLPTKLNLIKQVPVPSQVSSHLLSSKA
Sbjct: 181 PAKLKLAEMPQLEESRTMEKVTTVKQSSIKRPTSLPTKLNLIKQVPVPSQVSSHLLSSKA 240

Query: 241 KRTVKGELTSSPATVTGVRRSNSDKTGRSSMNSSKPSINGKEGLHMARSSFSVESKMDVS 300
           KRTVKGELTSSPATVTGVRRSNSDKTGRSSMNSSKPSINGKEGLHMARSSFSVESKMDVS
Sbjct: 241 KRTVKGELTSSPATVTGVRRSNSDKTGRSSMNSSKPSINGKEGLHMARSSFSVESKMDVS 300

Query: 301 VVIQEHDVQDSFIRGLHVESTLAGVSSDTTECVDESRSAPEEIIRPVSGDDGMESNRKNE 360
           VVIQEHDVQDSFIRGLHVESTLAGVSSDTTECVDESRSAPEEIIRPVSGDDGMESNRKNE
Sbjct: 301 VVIQEHDVQDSFIRGLHVESTLAGVSSDTTECVDESRSAPEEIIRPVSGDDGMESNRKNE 360

Query: 361 ASGGNEEPLQSSIVTGLLQSSDDQQLKNALSNLEAEENQTDDASPCQSSKNSIAVENAVL 420
           ASGGNEEPLQSSIVTGLLQSSDDQQLKNALSNLEAEENQTDDASPCQSSKNSIAVENAVL
Sbjct: 361 ASGGNEEPLQSSIVTGLLQSSDDQQLKNALSNLEAEENQTDDASPCQSSKNSIAVENAVL 420

Query: 421 GDSLSTENSSEIEADGVKANASMXXXXXXXXXXXXXXXXXXXXIEQLALGEKHAKEPGSF 480
           GDSLSTENSSEIEADGVKANASM                    IEQLALGEKHAKEPGSF
Sbjct: 421 GDSLSTENSSEIEADGVKANASMESQDAEGNEEEEAHEGLQESIEQLALGEKHAKEPGSF 480

Query: 481 LGSTSGNTVEDVKADEIFEGWTNNSPSHCQPISETSSDGELLGEPKSVQIQPSDSTLQTD 540
           LGSTSGNTVEDVKADEIFEGWTNNSPSHCQPISETSSDGELLGEPKSVQIQPSDSTLQTD
Sbjct: 481 LGSTSGNTVEDVKADEIFEGWTNNSPSHCQPISETSSDGELLGEPKSVQIQPSDSTLQTD 540

Query: 541 GLVISSTGNTFEQDELKPGFFLQQSPXXXXXXXXXXXXXXXXXXXXXXGTEDEGPTINKN 600
           GLVISSTGNTFEQDELKPGFFLQQSP                      GTEDEGPTINKN
Sbjct: 541 GLVISSTGNTFEQDELKPGFFLQQSPEELSEDEFYEEYDFELSELDESGTEDEGPTINKN 600

Query: 601 SYDHLKADGQRPKRISALEQDDDSATPYKLKFKRGKIVELQPDSNGPRKLKXXXXXXXXX 660
           SYDHLKADGQRPKRISALEQDDDSATPYKLKFKRGKIVELQPDSNGPRKLK         
Sbjct: 601 SYDHLKADGQRPKRISALEQDDDSATPYKLKFKRGKIVELQPDSNGPRKLKFRRRSASEF 660

Query: 661 XXXXXXXXXRIYKMNSTIDAGPSNLDVESPGVKLRHQDTQEKKDAQGLFNNVIEETASKL 720
                    RIYKMNSTIDAGPSNLDVESPGVKLRHQDTQEKKDAQGLFNNVIEETASKL
Sbjct: 661 SSSEGLSARRIYKMNSTIDAGPSNLDVESPGVKLRHQDTQEKKDAQGLFNNVIEETASKL 720

Query: 721 VESRKSKVKALVGAFETVILLQDGKPASTPHAGNSPHLFHDDEGNASEQAA 771
           VESRKSKVKALVGAFETVILLQDGKPASTPHAGNSPHLFHDDEGNASEQAA
Sbjct: 721 VESRKSKVKALVGAFETVILLQDGKPASTPHAGNSPHLFHDDEGNASEQAA 771



>Os12g0506500 Galactokinase/homoserine kinase family protein
          Length = 461

 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 34/50 (68%), Positives = 41/50 (82%)

Query: 690 PGVKLRHQDTQEKKDAQGLFNNVIEETASKLVESRKSKVKALVGAFETVI 739
           P V LRHQ T EKK ++ L+N+VIEETA KL  +RKSKVKALVGAFE++I
Sbjct: 407 PAVALRHQKTLEKKRSRRLYNSVIEETAGKLAIARKSKVKALVGAFESLI 456



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.305    0.123    0.332 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 22,938,783
Number of extensions: 889681
Number of successful extensions: 1850
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1846
Number of HSP's successfully gapped: 2
Length of query: 771
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 662
Effective length of database: 11,344,475
Effective search space: 7510042450
Effective search space used: 7510042450
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 160 (66.2 bits)