Os12g0506500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Galactokinase/homoserine kinase family protein.
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Os12g0506500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Galactokinase/homoserine kinase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 297.5 | 0.81 | 7.8 | 1.32 | 1.59 | -1.51 | -1.03 | 0.199 | 1.05 | 0.84 | 68 | 1387 | -- | -- |
| 297.09 | 0.803 | 7.8 | 1.3 | 1.68 | -1.54 | -1 | -- | 1.06 | 0.818 | 67.52 | 1315 | -- | -- |
| 301.24 | 0.808 | 7.79 | 1.36 | 1.68 | -1.56 | -- | -0.072 | 1.07 | 0.68 | 68 | 1304 | -- | -- |
| 301.14 | 0.808 | 7.8 | 1.35 | 1.71 | -1.57 | -- | -- | 1.06 | 0.72 | 67.29 | 1304 | -- | -- |
| 379.06 | 0.912 | 7.75 | 1.22 | -- | -1.18 | -- | 0.962 | 1.18 | -- | 74 | 1598 | -- | -- |
| 387.22 | 0.923 | 7.78 | 0.994 | 1.43 | -- | -1.31 | -- | 1.13 | 0.76 | -- | -- | -- | -- |
| 394.29 | 0.93 | 7.78 | 1.04 | 1.43 | -- | -- | -- | 1.14 | 0.6 | -- | -- | -- | -- |
| 384.45 | 0.917 | 7.75 | 1.19 | -- | -1.17 | -- | -- | 1.17 | -- | 74 | 1598 | -- | -- |
| 347.76 | 0.869 | 7.82 | -- | 1.71 | -1.4 | -- | -- | 0.931 | 0.75 | 68 | 1304 | -- | -- |
| 523.11 | 1.07 | 7.76 | 1.09 | -- | -- | -- | -- | 1.16 | -- | -- | -- | -- | -- |
| 423.04 | 0.962 | 7.81 | -- | 1.45 | -- | -- | -- | 1.02 | 0.635 | -- | -- | -- | -- |
| 421.67 | 0.96 | 7.78 | -- | -- | -1.15 | -- | -- | 1.04 | -- | 74 | 1598 | -- | -- |
| 554.73 | 1.1 | 7.78 | -- | -- | -- | -- | -- | 1.04 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 295.09 | humidity | 60 | 1440 | > th | dose independent | rect. | 14 | 3 |
| 3 | 296.34 | humidity | 60 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 4 | 297.56 | humidity | 60 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 5 | 298.09 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 7 | 298.40 | humidity | 70 | 1440 | < th | dose dependent | rect. | 13 | 4 |
| 10 | 299.05 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 12 | 299.65 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 16 |
| 14 | 299.67 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 30 | 299.84 | humidity | 60 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 38 | 299.89 | humidity | 80 | 1440 | < th | dose dependent | sin | 22 | NA |
| 46 | 299.91 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 81 | 300.08 | humidity | 80 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 105 | 300.18 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 106 | 300.19 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 120 | 300.34 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 22 |
| 123 | 300.35 | humidity | 80 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 150 | 300.65 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 217 | 301.30 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 10 |
| 229 | 301.34 | humidity | 70 | 1440 | < th | dose dependent | rect. | 13 | 20 |
| 246 | 301.52 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 22 |
| 253 | 301.68 | humidity | 60 | 1440 | > th | dose independent | rect. | 13 | 20 |
| 259 | 301.79 | humidity | 60 | 1440 | > th | dose independent | rect. | 13 | 10 |
| 267 | 301.83 | humidity | 60 | 1440 | > th | dose independent | rect. | 13 | 14 |
| 268 | 301.83 | humidity | 60 | 1440 | > th | dose independent | rect. | 13 | 16 |
| 334 | 302.74 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 10 |
| 335 | 302.74 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 13 |
| 338 | 302.74 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 17 |
| 350 | 302.84 | humidity | 70 | 1440 | < th | dose independent | sin | 18 | NA |
| 468 | 303.84 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 578 | 304.54 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |
| 579 | 304.54 | humidity | 70 | 1440 | < th | dose independent | rect. | 6 | 14 |
| 637 | 304.59 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 755 | 305.03 | humidity | 60 | 1440 | > th | dose independent | sin | 18 | NA |
| 795 | 305.24 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 800 | 305.28 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 17 |
| 802 | 305.28 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 803 | 305.29 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 14 |
| 808 | 305.29 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 21 |
| 809 | 305.29 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 816 | 305.30 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 18 |
| 828 | 305.30 | humidity | 70 | 1440 | > th | dose independent | rect. | 22 | 22 |
| 833 | 305.31 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 964 | 306.04 | humidity | 50 | 1440 | > th | dose dependent | rect. | 5 | 12 |