BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0205800 Os03g0205800|Os03g0205800
(404 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0205800 GCN5-related N-acetyltransferase domain contai... 575 e-164
Os03g0764000 GCN5-related N-acetyltransferase domain contai... 263 2e-70
Os07g0116600 155 5e-38
Os02g0180400 149 3e-36
Os06g0650300 127 2e-29
Os12g0561600 108 9e-24
>Os03g0205800 GCN5-related N-acetyltransferase domain containing protein
Length = 404
Score = 575 bits (1481), Expect = e-164, Method: Compositional matrix adjust.
Identities = 308/404 (76%), Positives = 308/404 (76%)
Query: 1 MRDXXXXXGVVIIIREYDPSRDRAGTEAVDRECDVGPTGGMSLHADLLGDPVARIRHSPD 60
MRD GVVIIIREYDPSRDRAGTEAVDRECDVGPTGGMSLHADLLGDPVARIRHSPD
Sbjct: 1 MRDEEEEEGVVIIIREYDPSRDRAGTEAVDRECDVGPTGGMSLHADLLGDPVARIRHSPD 60
Query: 61 YLMLVAETTSGAXXXXXXXXXXXXXXKSVATGKSCPGAPAVASVGYILGLRVAPSHRRMG 120
YLMLVAETTSGA KSVATGKSCPGAPAVASVGYILGLRVAPSHRRMG
Sbjct: 61 YLMLVAETTSGATGGRIIVGIIRGTVKSVATGKSCPGAPAVASVGYILGLRVAPSHRRMG 120
Query: 121 LALRMVRRMEAWFERMGAEYAYMATDKSNEASLRLFTVRCGYSKFRTPSLLXXXXXXXXX 180
LALRMVRRMEAWFERMGAEYAYMATDKSNEASLRLFTVRCGYSKFRTPSLL
Sbjct: 121 LALRMVRRMEAWFERMGAEYAYMATDKSNEASLRLFTVRCGYSKFRTPSLLVHPVHAHRR 180
Query: 181 XXXXXXXXFRLGARDAERLYDGRFAHVEFFPADIGAVLGNQLSIGTFLAVIDDDGRWRHG 240
FRLGARDAERLYDGRFAHVEFFPADIGAVLGNQLSIGTFLAVIDDDGRWRHG
Sbjct: 181 RVPRRAAVFRLGARDAERLYDGRFAHVEFFPADIGAVLGNQLSIGTFLAVIDDDGRWRHG 240
Query: 241 EWRGAERFXXXXXXXXXXXXXXDCGGVFXXXXXXXXXXXXXXXXXXXXXXXXXXWMRVPS 300
EWRGAERF DCGGVF WMRVPS
Sbjct: 241 EWRGAERFLASPPASWALASLWDCGGVFRLELRGASRLRRAAAAATRALDRAARWMRVPS 300
Query: 301 VPDFFRPFSGWFVYGLGGDGPDXXXXXXXXXXTFVNMARGRXXXXXXXXXXCDPLRRRIP 360
VPDFFRPFSGWFVYGLGGDGPD TFVNMARGR CDPLRRRIP
Sbjct: 301 VPDFFRPFSGWFVYGLGGDGPDAAVAAEALFATFVNMARGRAAAVAVEVAACDPLRRRIP 360
Query: 361 HWRRLSCTEDLWCMKRLGRVGESDGWDWARSPPGLSIFVDPREV 404
HWRRLSCTEDLWCMKRLGRVGESDGWDWARSPPGLSIFVDPREV
Sbjct: 361 HWRRLSCTEDLWCMKRLGRVGESDGWDWARSPPGLSIFVDPREV 404
>Os03g0764000 GCN5-related N-acetyltransferase domain containing protein
Length = 399
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 172/408 (42%), Positives = 215/408 (52%), Gaps = 27/408 (6%)
Query: 11 VIIIREYDPSRDRAGTEAVDRECDVGPTGG----MSLHADLLGDPVARIRHSPDYLMLVA 66
V+ +REY RDRA E V+REC+VG +GG M L DLLGDP+ RIR+SP YLMLVA
Sbjct: 3 VVEVREYREDRDRAAVEEVERECEVGSSGGGEAKMCLFTDLLGDPLCRIRNSPAYLMLVA 62
Query: 67 ETTSGAXXXXXXXXXXXXX--XKSVATGKSCPGA--PAVASVGYILGLRVAPSHRRMGLA 122
ET +G K+V +G S P + V YILGLRV+P +RR G+
Sbjct: 63 ETANGGGGGNGREIIGLIRGCVKTVVSGGSVQAGKDPIYSKVAYILGLRVSPRYRRKGVG 122
Query: 123 LRMVRRMEAWFERMGAEYAYMATDKSNEASLRLFTVRCGYSKFRTPSLLXXXXXXXXXXX 182
++V RME WF + GAEY+YMAT++ NEAS+RLFT RCGYSKFRTPS+L
Sbjct: 123 KKLVGRMEEWFRQSGAEYSYMATEQDNEASVRLFTGRCGYSKFRTPSVLVHPVFGHALQP 182
Query: 183 XXXXXXFRLGARDAERLYDGRFAHVEFFPADIGAVLGNQLSIGTFLAVIDDDGRWRHGEW 242
+L R+AE LY FA VEFFPADI AVL +LS+GTFLAV W
Sbjct: 183 SRNAAIRKLEPREAELLYRWHFAAVEFFPADIDAVLSKELSLGTFLAVPAGT------RW 236
Query: 243 RGAERFXXXXXXXXXXXXXXDCGGVFXXXXXXXXXXXXXXXXXXXXXXXXXXWMRVPSVP 302
E F +C F W+++PS+P
Sbjct: 237 ESVEAFMDAPPASWAVMSVWNCMDAFRLEVRGAPRLMRAAAVATRLVDRAAPWLKIPSIP 296
Query: 303 DFFRPFSGWFVYGLGGDGPDXXXXXXXXXXTFVNMAR-GRXXXXXXXXXXCDPLRRRIPH 361
+ F PF +F+YG+GG GP NMAR G C+P+R +PH
Sbjct: 297 NLFAPFGLYFLYGVGGAGPASPRLVRALCRHAHNMARKGGCGVVATEVSACEPVRAGVPH 356
Query: 362 WRRLSCTEDLWCMKRLGRVGESDGW------DWARSPPGLSIFVDPRE 403
W RL EDLWC+KRL +DG+ DW ++PPG SIFVDPRE
Sbjct: 357 WARLG-AEDLWCIKRL-----ADGYNHGPLGDWTKAPPGRSIFVDPRE 398
>Os07g0116600
Length = 331
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 111/164 (67%), Gaps = 6/164 (3%)
Query: 9 GVVIIIREYDPSRDRAGTEAVDRECDVGPTGG-MSLHADLLGDPVARIRHSPDYLMLVAE 67
G V+++RE+D RDR G E V+R C+VGP+GG + L DLLGDP+ R+RHSP YLMLVAE
Sbjct: 11 GEVVLVREFDGGRDRPGVELVERACEVGPSGGKLCLFTDLLGDPLCRVRHSPAYLMLVAE 70
Query: 68 TTSGAXXXXXXXXXXXXXXKSVATGKSCPGAPAVASVGYILGLRVAPSHRRMGLALRMVR 127
G K+VA G+S + V Y+LGLRV+P HRR G+ R+V
Sbjct: 71 AVGGPLGTEIVGVVRGCV-KTVACGRS----QLFSKVAYLLGLRVSPRHRRRGIGRRLVE 125
Query: 128 RMEAWFERMGAEYAYMATDKSNEASLRLFTVRCGYSKFRTPSLL 171
RME WF MGAEYAY+ATD+ NE S+RLFT CGY+KFRTPS+L
Sbjct: 126 RMEEWFREMGAEYAYVATDRDNEPSVRLFTGACGYAKFRTPSVL 169
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 64/112 (57%), Gaps = 5/112 (4%)
Query: 295 WMRVPSVPDFFRPFSGWFVYGLGGDGPDXXXXXXXXXXTFVNMA-RGRXXXXXXXXXXCD 353
W+ +PS+P+ F PF FVYGLGG GP N+A RG C+
Sbjct: 221 WLGIPSIPNLFEPFGLHFVYGLGGGGPAAARMARALFRHAHNVARRGGARVVATEVGACE 280
Query: 354 PLRRRIPHWRRLSCTEDLWCMKRLGRVGESDGW--DWARSPPGLSIFVDPRE 403
PLR +PHW RL +DLWC+KRL G DG DW+++PPG SIFVDPRE
Sbjct: 281 PLRAGVPHWPRLG-ADDLWCIKRLAD-GYGDGALGDWSKAPPGTSIFVDPRE 330
>Os02g0180400
Length = 421
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 132/421 (31%), Positives = 174/421 (41%), Gaps = 42/421 (9%)
Query: 11 VIIIREYDPSRDRAGTEAVDRECDVGPTG--------------GMSLHADLLGDPVARIR 56
++ +RE+ +D E ++R C G +G GMSL+A+ +GDP AR+R
Sbjct: 14 MVRVREFIMEKDLPAVEELERLCQAGLSGDNGAGGGGGKKKKRGMSLYAEQIGDPFARVR 73
Query: 57 HSPDYLMLVAETTSGAXXXXXXXXXXXXXXKSVATGKSCPGAPAVASVGYILGLRVAPSH 116
H+PD+++LVAE S + K+ +LGLRV+PSH
Sbjct: 74 HAPDHVILVAECGDEVVGVIKACVRMVTRGSSSSLRKTKTKTNKFVKAACLLGLRVSPSH 133
Query: 117 RRMGLALRMVRRMEAWFERMGAEYAYMATDKSNEASLRLFTVRCGYSKFRTPSLLXXXXX 176
RR+G+A +VRR E W GA YA MAT SN ASL LF R Y+ FR P L
Sbjct: 134 RRLGIATELVRRAEEWCAARGAAYATMATTASNAASLALFQGRFKYALFRKPRFLGHPVH 193
Query: 177 XXXXXXXXXXXXFR----LGARDAERLYDGRFAHVEFFPADIGAVLGNQLSIGTFLAVID 232
+ L A L A EF PAD+ A+L ++L+ GT+LAV
Sbjct: 194 RHRARVPRAHRVLQLPPPLAAAAYAALLPAAAAAPEFVPADLPALLAHKLTRGTYLAVER 253
Query: 233 DDGRWRHGEWRGAERFXXXXXXXXXXXXXXDCGGVFXXXXXXXXXXXXXXXXXXXXXXXX 292
G F GG
Sbjct: 254 SPGAG------APSSFAVLSVYDATRSLSFRVGGA--------PPLLRASLAAARALDRR 299
Query: 293 XXWMRVPSVPDFFRPFSGWFVYGLGGDGPDXXXXXXXXXXTFVNMARGR--XXXXXXXXX 350
W+RVPSVPD FRPF + +YGL GP N+AR
Sbjct: 300 APWLRVPSVPDVFRPFGAYLLYGLHMSGPAGAALLRTLCRHAHNVARNNPACAVVAADVA 359
Query: 351 XCDPLRRRIPHWRRLSCTEDLWCMKRLGRV--------GESDGWDWARSPPGLSIFVDPR 402
DP +PHWRR SC ED+WC+K++ V D DW +PP +FVDPR
Sbjct: 360 PDDPAAAAVPHWRRFSCDEDVWCIKKITSVAANGNAAPAAGDDDDWTTAPPSSVLFVDPR 419
Query: 403 E 403
E
Sbjct: 420 E 420
>Os06g0650300
Length = 419
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 120/267 (44%), Gaps = 37/267 (13%)
Query: 1 MRDXXXXXGVVIIIREYDPSRDRAGTEAVDRECDVGPTG--------------------- 39
M + V++ +RE+D +D E ++R C VG +G
Sbjct: 1 MVETTTMMKVLVRVREFDVEKDLPAVEELERRCQVGLSGDMAAVHDHADDGDGAAAKEKK 60
Query: 40 -----------GMSLHADLLGDPVARIRHSPDYLMLVAETTSGAXXXXXXXXXXXXXXKS 88
MSL + +GDP+AR+RH+P+++MLVAE
Sbjct: 61 KTKTKTKKKKASMSLCVEQIGDPLARVRHAPEHVMLVAEYGEEEEKKKVVGVIKACVKTV 120
Query: 89 VATGKSCPGAPAVASVGYILGLRVAPSHRRMGLALRMVRRMEAWFERMGAEYAYMATDKS 148
GK V +LGLRV+PSHRR+G+ +VRR E W GAE+A MAT +S
Sbjct: 121 SRGGKQ---EKPFVKVANLLGLRVSPSHRRLGIGTALVRRAEEWCVARGAEHATMATTES 177
Query: 149 NEASLRLFTVRCGYSKFRTPSLLXXXXXXXXXXXXXXXXXFRLGARDAERLYDGRF--AH 206
N ASL LFT R GY+ FR P + F+L A Y
Sbjct: 178 NAASLALFTGRFGYAPFRRPEFIGHPVHAHRLPVARGHRVFQLPPEVAAAAYARLLPPQD 237
Query: 207 VEFFPADIGAVLGNQLSIGTFLAVIDD 233
EF PAD+ A+L ++L++GTF+AV D
Sbjct: 238 AEFLPADMPALLAHKLTLGTFVAVAAD 264
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Query: 295 WMRVPSVPDFFRPFSGWFVYGLGGDGPDXXXXXXXXXXTFVNMARGRXXXXXXXXXXC-- 352
W+ +PS+PD FRPF + +YGL GPD N+AR
Sbjct: 307 WLHLPSIPDIFRPFGAYLLYGLRMSGPDGPALLRSLCHHAHNVARKNPACAVVAADISPD 366
Query: 353 DPLRRRIPHWRRLSCTEDLWCMKRLG-RVGESDGWDWARSPPGLSIFVDPRE 403
DP +P WRR C ED+WC+K L ++D W PPG +FVDPRE
Sbjct: 367 DPAAAAVPRWRRFCCDEDVWCIKNLNPDEHDADDWAAPPPPPGRHLFVDPRE 418
>Os12g0561600
Length = 349
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 110/223 (49%), Gaps = 11/223 (4%)
Query: 12 IIIREYDPSRDRAGTEAVDRECDVGPTGGMSLHADLLGDPVARIRHSPDYLMLVAETTSG 71
+ IREYD RD E ++R C++G G S+ +++GDP+ RIR ++M+VAE T G
Sbjct: 6 VSIREYDRERDMEAIEKLERSCEIGAGKGFSIVTNMMGDPLCRIRLFQLHVMMVAELTGG 65
Query: 72 AXXXXXXXXXXXXXXKSVATGKSCPGAPAVASVGYILGLRVAPSHRRMGLALRMVRRMEA 131
K VATG G +A GY+LGLRV+P HRR G+ L++V +EA
Sbjct: 66 GGELVGVARGCV---KRVATG-VVDGDTVLA--GYVLGLRVSPVHRRKGIGLKLVESVEA 119
Query: 132 WFERMGAEYAYMATDKSNEASLRLFTVRCGYSKFRTPSLLXXXXX-----XXXXXXXXXX 186
W R GA + A D +N AS LF R GY+ S+L
Sbjct: 120 WAARHGARHVVAAADAANAASRGLFVGRRGYATAARLSILVQPLADVRPPPAAASSRSDV 179
Query: 187 XXFRLGARDAERLYDGRFAHVEFFPADIGAVLGNQLSIGTFLA 229
RL A LY RF P+D+ AVLG S+GT++A
Sbjct: 180 RIERLAVEQAAMLYKRRFGGEPLCPSDVDAVLGAAPSLGTWMA 222
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.142 0.468
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,897,379
Number of extensions: 412575
Number of successful extensions: 1158
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1133
Number of HSP's successfully gapped: 9
Length of query: 404
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 301
Effective length of database: 11,657,759
Effective search space: 3508985459
Effective search space used: 3508985459
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)