Os03g0205800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : GCN5-related N-acetyltransferase domain containing protein.
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Os03g0205800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : GCN5-related N-acetyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 167.97 | 0.609 | 6.47 | 0.303 | 2.54 | 1.91 | 0.169 | -3.05 | -0.143 | 13.3 | 29.4 | 372 | -- | -- |
| 176.35 | 0.618 | 6.53 | -0.244 | 2.47 | 1.93 | 0.393 | -- | -0.266 | 13.2 | 26.81 | 375 | -- | -- |
| 168.07 | 0.604 | 6.47 | 0.311 | 2.54 | 1.9 | -- | -3.04 | -0.14 | 13.3 | 29.2 | 369 | -- | -- |
| 177.04 | 0.62 | 6.53 | -0.239 | 2.46 | 1.9 | -- | -- | -0.266 | 13.1 | 26.64 | 377 | -- | -- |
| 412.21 | 0.946 | 6.5 | 0.454 | -- | 3.03 | -- | -2.13 | -0.0949 | -- | 30.07 | 923 | -- | -- |
| 229.08 | 0.71 | 6.61 | -0.744 | 2.34 | -- | 0.254 | -- | -0.69 | 12.5 | -- | -- | -- | -- |
| 229.35 | 0.709 | 6.61 | -0.735 | 2.34 | -- | -- | -- | -0.689 | 12.5 | -- | -- | -- | -- |
| 414.39 | 0.948 | 6.51 | 0.0998 | -- | 3.15 | -- | -- | -0.0568 | -- | 28.95 | 934 | -- | -- |
| 178.37 | 0.622 | 6.52 | -- | 2.47 | 2.01 | -- | -- | -0.221 | 13.2 | 26.77 | 377 | -- | -- |
| 573.93 | 1.12 | 6.66 | -0.816 | -- | -- | -- | -- | -0.728 | -- | -- | -- | -- | -- |
| 243.57 | 0.73 | 6.6 | -- | 2.35 | -- | -- | -- | -0.607 | 12.6 | -- | -- | -- | -- |
| 414.62 | 0.948 | 6.51 | -- | -- | 3.11 | -- | -- | -0.0766 | -- | 28.96 | 931 | -- | -- |
| 591.5 | 1.14 | 6.64 | -- | -- | -- | -- | -- | -0.638 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 156.13 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 9 | 162.67 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 21 |
| 24 | 166.04 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 21 |
| 30 | 166.68 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 20 |
| 32 | 166.85 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 20 |
| 34 | 166.96 | temperature | 30 | 90 | < th | dose dependent | rect. | 4 | 23 |
| 38 | 166.99 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 21 |
| 41 | 167.18 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 48 | 167.43 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 51 | 167.46 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 69 | 167.93 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 17 |
| 111 | 168.54 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 143 | 168.95 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 173 | 169.23 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 229 | 169.92 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 10 |
| 292 | 170.57 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 306 | 170.64 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 326 | 170.91 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 352 | 171.11 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 16 |
| 354 | 171.14 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 8 |
| 362 | 171.22 | radiation | 20 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 424 | 172.06 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 19 |
| 438 | 172.14 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 454 | 172.32 | temperature | 30 | 270 | < th | dose dependent | sin | 7 | NA |
| 483 | 172.56 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 12 |
| 641 | 174.13 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 738 | 174.96 | temperature | 25 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 755 | 175.06 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 5 |
| 820 | 175.51 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 19 |
| 831 | 175.57 | temperature | 25 | 4320 | < th | dose dependent | rect. | 12 | 17 |
| 851 | 175.65 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 852 | 175.65 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 4 |
| 854 | 175.66 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 879 | 175.74 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 11 |
| 890 | 175.78 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 926 | 175.88 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 11 |
| 990 | 176.01 | temperature | 25 | 4320 | < th | dose dependent | sin | 14 | NA |
| 993 | 176.01 | temperature | 25 | 4320 | < th | dose dependent | rect. | 23 | 19 |
| 998 | 176.02 | temperature | 25 | 4320 | < th | dose dependent | rect. | 23 | 17 |