Os03g0764000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : GCN5-related N-acetyltransferase domain containing protein.
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Os03g0764000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : GCN5-related N-acetyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 263.37 | 0.762 | 6.12 | 2.25 | 0.923 | -1.87 | -0.068 | 2.59 | -0.52 | 6.86 | 21.1 | 1807 | -- | -- |
| 269.02 | 0.764 | 6.2 | 1.76 | 1.11 | -1.83 | -0.238 | -- | -0.703 | 6.19 | 18.68 | 2501 | -- | -- |
| 263.38 | 0.756 | 6.11 | 2.25 | 0.922 | -1.87 | -- | 2.6 | -0.519 | 6.86 | 21.1 | 1807 | -- | -- |
| 265.96 | 0.76 | 6.2 | 1.72 | 1.08 | -2.06 | -- | -- | -0.709 | 6.14 | 13.85 | 2475 | -- | -- |
| 303.09 | 0.811 | 6.13 | 2.36 | -- | -2.09 | -- | 2.74 | -0.49 | -- | 21.48 | 1968 | -- | -- |
| 353.98 | 0.882 | 6.29 | 0.895 | 1.09 | -- | -0.191 | -- | -1.12 | 7 | -- | -- | -- | -- |
| 354.07 | 0.881 | 6.29 | 0.892 | 1.09 | -- | -- | -- | -1.12 | 6.98 | -- | -- | -- | -- |
| 277.96 | 0.777 | 6.22 | 1.59 | -- | -3.01 | -- | -- | -0.658 | -- | 14.9 | 494 | -- | -- |
| 321.09 | 0.835 | 6.26 | -- | 0.975 | -1.29 | -- | -- | -0.978 | 6.85 | 21.71 | 1805 | -- | -- |
| 416.31 | 0.953 | 6.31 | 0.914 | -- | -- | -- | -- | -1.1 | -- | -- | -- | -- | -- |
| 375.02 | 0.906 | 6.31 | -- | 1.1 | -- | -- | -- | -1.22 | 6.93 | -- | -- | -- | -- |
| 338.05 | 0.856 | 6.27 | -- | -- | -2.37 | -- | -- | -0.906 | -- | 15.4 | 464 | -- | -- |
| 438.34 | 0.977 | 6.33 | -- | -- | -- | -- | -- | -1.2 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 251.69 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 17 |
| 8 | 257.10 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 22 |
| 39 | 261.51 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 40 | 261.56 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 43 | 261.62 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 69 | 263.38 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 72 | 263.49 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 73 | 263.53 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 13 |
| 76 | 263.57 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 77 | 263.59 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 82 | 263.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 3 |
| 83 | 263.79 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 85 | 263.86 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 87 | 263.91 | radiation | 1 | 4320 | > th | dose independent | rect. | 17 | 13 |
| 89 | 263.97 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 97 | 264.19 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 101 | 264.27 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 102 | 264.31 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 107 | 264.35 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 115 | 264.57 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 6 |
| 117 | 264.63 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 21 |
| 125 | 264.80 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 142 | 264.96 | temperature | 10 | 270 | > th | dose dependent | rect. | 9 | 23 |
| 159 | 265.12 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 19 |
| 163 | 265.17 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 20 |
| 177 | 265.24 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 21 |
| 182 | 265.26 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 22 |
| 217 | 265.42 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 22 |
| 229 | 265.49 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 235 | 265.51 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 21 |
| 241 | 265.56 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 256 | 265.60 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 269 | 265.66 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 275 | 265.68 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 346 | 265.94 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 425 | 266.11 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 439 | 266.13 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 492 | 266.22 | temperature | 15 | 1440 | > th | dose dependent | sin | 4 | NA |
| 516 | 266.26 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 23 |
| 520 | 266.27 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 525 | 266.28 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 23 |
| 536 | 266.30 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 573 | 266.36 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 23 |
| 580 | 266.37 | radiation | 40 | 4320 | < th | dose dependent | rect. | 18 | 9 |
| 624 | 266.45 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 636 | 266.45 | wind | 7 | 43200 | > th | dose dependent | sin | 14 | NA |
| 654 | 266.47 | wind | 5 | 43200 | > th | dose dependent | rect. | 3 | 22 |
| 708 | 266.57 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 727 | 266.59 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 23 |
| 746 | 266.63 | wind | 7 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 754 | 266.65 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 23 |
| 763 | 266.66 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 778 | 266.68 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 23 |
| 797 | 266.72 | wind | 7 | 43200 | < th | dose independent | rect. | 4 | 23 |
| 852 | 266.79 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 23 |
| 858 | 266.80 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 23 |
| 879 | 266.83 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 887 | 266.84 | wind | 5 | 43200 | > th | dose independent | rect. | 23 | 18 |
| 911 | 266.88 | wind | 7 | 43200 | < th | dose independent | rect. | 8 | 23 |
| 921 | 266.89 | wind | 7 | 43200 | > th | dose independent | rect. | 4 | 23 |
| 957 | 266.95 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 966 | 266.97 | wind | 5 | 43200 | > th | dose dependent | rect. | 23 | 17 |
| 980 | 266.99 | wind | 7 | 43200 | < th | dose independent | rect. | 23 | 23 |