BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0192700 Os03g0192700|AK058750
(510 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0192700 Similar to Myo-inositol-1-phosphate synthase 1058 0.0
Os10g0369900 Similar to Myo-inositol-1-phosphate synthase 934 0.0
>Os03g0192700 Similar to Myo-inositol-1-phosphate synthase
Length = 510
Score = 1058 bits (2736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/510 (100%), Positives = 510/510 (100%)
Query: 1 MFIESFRVESPHVRYGAAEIESDYQYDTTELVHESHDGASRWIVRPKSVRYNFRTTTTVP 60
MFIESFRVESPHVRYGAAEIESDYQYDTTELVHESHDGASRWIVRPKSVRYNFRTTTTVP
Sbjct: 1 MFIESFRVESPHVRYGAAEIESDYQYDTTELVHESHDGASRWIVRPKSVRYNFRTTTTVP 60
Query: 61 KLGVMLVGWGGNNGSTLTAGVIANREGISWATKDKVQQANYYGSLTQASTIRVGSYNGEE 120
KLGVMLVGWGGNNGSTLTAGVIANREGISWATKDKVQQANYYGSLTQASTIRVGSYNGEE
Sbjct: 61 KLGVMLVGWGGNNGSTLTAGVIANREGISWATKDKVQQANYYGSLTQASTIRVGSYNGEE 120
Query: 121 IYAPFKSLLPMVNPDDLVFGGWDISNMNLADAMTRAKVLDIDLQKQLRPYMESMVPLPGI 180
IYAPFKSLLPMVNPDDLVFGGWDISNMNLADAMTRAKVLDIDLQKQLRPYMESMVPLPGI
Sbjct: 121 IYAPFKSLLPMVNPDDLVFGGWDISNMNLADAMTRAKVLDIDLQKQLRPYMESMVPLPGI 180
Query: 181 YDPDFIAANQGSRANNVIKGTKKEQMEQIIKDIREFKEKSKVDKVVVLWTANTERYSNVC 240
YDPDFIAANQGSRANNVIKGTKKEQMEQIIKDIREFKEKSKVDKVVVLWTANTERYSNVC
Sbjct: 181 YDPDFIAANQGSRANNVIKGTKKEQMEQIIKDIREFKEKSKVDKVVVLWTANTERYSNVC 240
Query: 241 VGLNDTMENLLASVDKNEAEISPSTLYAIACVMEGIPFINGSPQNTFVPGLIDLAIKNNC 300
VGLNDTMENLLASVDKNEAEISPSTLYAIACVMEGIPFINGSPQNTFVPGLIDLAIKNNC
Sbjct: 241 VGLNDTMENLLASVDKNEAEISPSTLYAIACVMEGIPFINGSPQNTFVPGLIDLAIKNNC 300
Query: 301 LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKS 360
LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKS
Sbjct: 301 LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKS 360
Query: 361 NVVDDMVSSNAILYELGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKSTIVLHNTC 420
NVVDDMVSSNAILYELGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKSTIVLHNTC
Sbjct: 361 NVVDDMVSSNAILYELGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKSTIVLHNTC 420
Query: 421 EDSLLAAPIILDLVLLAELSTRIQLKAEGEEKFHSFHPVATILSYLTKAPLVPPGTPVVN 480
EDSLLAAPIILDLVLLAELSTRIQLKAEGEEKFHSFHPVATILSYLTKAPLVPPGTPVVN
Sbjct: 421 EDSLLAAPIILDLVLLAELSTRIQLKAEGEEKFHSFHPVATILSYLTKAPLVPPGTPVVN 480
Query: 481 ALAKQRAMLENIMRACVGLAPENNMILEYK 510
ALAKQRAMLENIMRACVGLAPENNMILEYK
Sbjct: 481 ALAKQRAMLENIMRACVGLAPENNMILEYK 510
>Os10g0369900 Similar to Myo-inositol-1-phosphate synthase
Length = 509
Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/510 (87%), Positives = 484/510 (94%), Gaps = 1/510 (0%)
Query: 1 MFIESFRVESPHVRYGAAEIESDYQYDTTELVHESHDGASRWIVRPKSVRYNFRTTTTVP 60
MF+E FRVESP VRYG EIES+Y+YDTTE+V W+VRPKSV Y+F+TTTTVP
Sbjct: 1 MFVEGFRVESPRVRYGDGEIESEYRYDTTEVVAPPSPEKG-WVVRPKSVTYHFKTTTTVP 59
Query: 61 KLGVMLVGWGGNNGSTLTAGVIANREGISWATKDKVQQANYYGSLTQASTIRVGSYNGEE 120
KLGVMLVGWGGNNG+TLTAGVIANREGISWATK+KV +ANY+GSLTQ+STIRVGSYNGEE
Sbjct: 60 KLGVMLVGWGGNNGTTLTAGVIANREGISWATKEKVHKANYFGSLTQSSTIRVGSYNGEE 119
Query: 121 IYAPFKSLLPMVNPDDLVFGGWDISNMNLADAMTRAKVLDIDLQKQLRPYMESMVPLPGI 180
IYAPFKSL+PMVNP+D+VFGGWDIS+MNLADAMTRA+VLDIDLQKQLR +MESMVPLPG+
Sbjct: 120 IYAPFKSLVPMVNPNDIVFGGWDISSMNLADAMTRARVLDIDLQKQLRHHMESMVPLPGV 179
Query: 181 YDPDFIAANQGSRANNVIKGTKKEQMEQIIKDIREFKEKSKVDKVVVLWTANTERYSNVC 240
Y+PDFIAANQGSRANNVIKGTKKEQ+EQ+ KDIREFKEKSKVDKVVVLWTANTERYSNV
Sbjct: 180 YNPDFIAANQGSRANNVIKGTKKEQVEQVKKDIREFKEKSKVDKVVVLWTANTERYSNVV 239
Query: 241 VGLNDTMENLLASVDKNEAEISPSTLYAIACVMEGIPFINGSPQNTFVPGLIDLAIKNNC 300
G+NDTM+NLLAS+DK+E E+SPSTLYAIACVMEG+PFINGSPQNTFVPGLI+LAIK N
Sbjct: 240 AGMNDTMDNLLASLDKDEPEMSPSTLYAIACVMEGVPFINGSPQNTFVPGLIELAIKKNS 299
Query: 301 LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKS 360
+IGGDDFKSGQTKMKSVLVDFLVGAGIKPTSI SYNHLGNNDGMNLSAPQTFRSKEISKS
Sbjct: 300 VIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIASYNHLGNNDGMNLSAPQTFRSKEISKS 359
Query: 361 NVVDDMVSSNAILYELGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKSTIVLHNTC 420
VVDDMVSSNAILYE GEHPDHV+VIKY+PYVGDSKRAMDEYTSEIFMGGK+TIVLHNTC
Sbjct: 360 GVVDDMVSSNAILYEPGEHPDHVIVIKYIPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTC 419
Query: 421 EDSLLAAPIILDLVLLAELSTRIQLKAEGEEKFHSFHPVATILSYLTKAPLVPPGTPVVN 480
EDSLLAAPIILDLVLLAELSTRIQLKAE ++K+HSFHPVATILSYL+KAPLVPPGTPVVN
Sbjct: 420 EDSLLAAPIILDLVLLAELSTRIQLKAEDQDKYHSFHPVATILSYLSKAPLVPPGTPVVN 479
Query: 481 ALAKQRAMLENIMRACVGLAPENNMILEYK 510
ALAKQRAMLENI+RACVGLAPENNM+LEYK
Sbjct: 480 ALAKQRAMLENILRACVGLAPENNMMLEYK 509
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.133 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,917,315
Number of extensions: 712678
Number of successful extensions: 1532
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1531
Number of HSP's successfully gapped: 2
Length of query: 510
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 405
Effective length of database: 11,553,331
Effective search space: 4679099055
Effective search space used: 4679099055
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 158 (65.5 bits)