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Os03g0192700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Myo-inositol-1-phosphate synthase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.3 (0.0366) R2 : 0.898
β1 : -1.07 (0.138) R2dD : 0.016 R2D : 0.0195
β2 : 6.14 (0.102) R2dC : 0.979 R2C : 0.823
β3 : 2.02 (0.184) R2dE : 0.0373 R2E : -0.088
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.346 (0.0821) R2dN8 : 0.00578 R2N8 : 0.00148
σ : 0.67
deviance : 206.7
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C
peak time of C : 6.02
E
wheather : temperature
threshold : 29.63
memory length : 732
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 9.37
open length of G : 3.65

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
194.16 0.655 13.4 -1.41 6.17 2.49 -0.046 3 -0.402 5.98 29.51 704 9.25 3.68
203 0.664 13.3 -1.06 6.11 2.01 -1.01 -- -0.329 6.02 29.42 734 9.35 3.77
194.03 0.649 13.4 -1.41 6.16 2.55 -- 3.13 -0.404 5.98 29.35 710 9.25 3.52
206.7 0.67 13.3 -1.07 6.14 2.02 -- -- -0.346 6.02 29.63 732 9.37 3.65
1904.73 2.04 13.5 -1.32 -- 2.69 -- 3.09 -0.378 -- 29.35 710 9.25 3.52
255.27 0.749 13.4 -1.56 5.73 -- -0.312 -- -0.654 6.2 -- -- -- --
255.51 0.749 13.4 -1.56 5.72 -- -- -- -0.652 6.2 -- -- -- --
1913.82 2.05 13.5 -1.17 -- 2.1 -- -- -0.357 -- 29.63 732 9.37 3.65
233.95 0.712 13.3 -- 6.22 2.32 -- -- -0.173 5.99 29.19 765 8.63 4.91
1954.85 2.07 13.5 -1.4 -- -- -- -- -0.526 -- -- -- -- --
319.52 0.836 13.4 -- 5.7 -- -- -- -0.479 6.22 -- -- -- --
1940.11 2.06 13.4 -- -- 2.71 -- -- -0.221 -- 29.19 765 8.63 4.91
2006.6 2.09 13.5 -- -- -- -- -- -0.371 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 195.56 temperature 30 720 < th dose dependent rect. 9 4
2 196.17 temperature 25 720 < th dose dependent rect. 6 10
10 197.91 temperature 30 270 < th dose dependent rect. 9 10
36 201.38 temperature 10 270 > th dose dependent rect. 6 11
50 202.36 temperature 30 270 < th dose dependent sin 0 NA
78 204.24 temperature 15 720 > th dose dependent rect. 7 3
81 204.31 temperature 25 270 < th dose independent rect. 9 10
84 204.41 temperature 10 720 > th dose dependent rect. 5 5
90 204.66 temperature 25 720 < th dose independent rect. 8 5
104 205.25 temperature 10 270 > th dose dependent sin 23 NA
119 205.57 temperature 30 720 < th dose dependent sin 3 NA
120 205.59 temperature 25 720 > th dose independent rect. 7 10
121 205.59 temperature 10 90 > th dose dependent sin 21 NA
139 206.14 temperature 30 10 < th dose dependent rect. 10 13
151 206.52 temperature 10 720 > th dose dependent rect. 5 9
154 206.61 temperature 25 720 < th dose independent rect. 2 13
235 208.35 temperature 25 720 < th dose independent sin 3 NA
260 208.78 temperature 15 270 > th dose dependent rect. 6 19
280 209.09 temperature 20 720 > th dose independent rect. 5 14
316 209.60 temperature 15 270 > th dose dependent rect. 5 21
387 210.65 temperature 30 270 < th dose dependent rect. 1 20
431 211.23 temperature 25 270 < th dose independent sin 0 NA
527 212.52 temperature 25 10 < th dose independent rect. 10 10
529 212.53 temperature 25 10 < th dose independent rect. 10 12
589 213.21 temperature 30 10 < th dose dependent rect. 8 15
600 213.33 atmosphere 1015 90 < th dose dependent rect. 7 12
623 213.51 temperature 10 720 > th dose dependent sin 3 NA
805 215.21 temperature 25 720 > th dose independent sin 2 NA
864 215.94 atmosphere 1000 30 > th dose dependent rect. 4 19
911 216.43 atmosphere 1015 720 < th dose dependent rect. 7 2
912 216.43 atmosphere 1000 270 > th dose dependent rect. 2 19
955 216.80 temperature 10 270 > th dose dependent rect. 11 14
992 217.11 atmosphere 1000 270 > th dose dependent rect. 3 17