BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0170900 Os03g0170900|AK100027
(538 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0170900 Sucrose transporter 1005 0.0
Os10g0404500 Sucrose transporter 677 0.0
Os02g0827200 Sucrose transporter 607 e-174
Os02g0576600 Sucrose transporter 551 e-157
Os12g0641400 Similar to Sucrose transporter 88 2e-17
>Os03g0170900 Sucrose transporter
Length = 538
Score = 1005 bits (2598), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/497 (100%), Positives = 497/497 (100%)
Query: 42 VETAAPISLGRLILSGMVAGGVQYGWALQLSLLTPYVQTLGLSHALTSFMWLCGPIAGMV 101
VETAAPISLGRLILSGMVAGGVQYGWALQLSLLTPYVQTLGLSHALTSFMWLCGPIAGMV
Sbjct: 42 VETAAPISLGRLILSGMVAGGVQYGWALQLSLLTPYVQTLGLSHALTSFMWLCGPIAGMV 101
Query: 102 VQPCVGLYSDRCTSKWGRRRPYILTGCVLICLAVVVIGFSADIGYAMGDTKEDCSVYHGS 161
VQPCVGLYSDRCTSKWGRRRPYILTGCVLICLAVVVIGFSADIGYAMGDTKEDCSVYHGS
Sbjct: 102 VQPCVGLYSDRCTSKWGRRRPYILTGCVLICLAVVVIGFSADIGYAMGDTKEDCSVYHGS 161
Query: 162 RWHAAIVYVLGFWLLDFSNNTVQGPARALMADLSGRHGPGTANSIFCSWMAMGNILGYSS 221
RWHAAIVYVLGFWLLDFSNNTVQGPARALMADLSGRHGPGTANSIFCSWMAMGNILGYSS
Sbjct: 162 RWHAAIVYVLGFWLLDFSNNTVQGPARALMADLSGRHGPGTANSIFCSWMAMGNILGYSS 221
Query: 222 GSTNNWHKWFPFLKTRACCEACANLKGAFLVAVIFLSLCLVITLIFAKEVPFKGNAALPT 281
GSTNNWHKWFPFLKTRACCEACANLKGAFLVAVIFLSLCLVITLIFAKEVPFKGNAALPT
Sbjct: 222 GSTNNWHKWFPFLKTRACCEACANLKGAFLVAVIFLSLCLVITLIFAKEVPFKGNAALPT 281
Query: 282 KSNEPAEPEGTGPLAVLKGFRNLPTGMPSVLIVTGLTWLSWFPFILYDTDWMGREIYHGD 341
KSNEPAEPEGTGPLAVLKGFRNLPTGMPSVLIVTGLTWLSWFPFILYDTDWMGREIYHGD
Sbjct: 282 KSNEPAEPEGTGPLAVLKGFRNLPTGMPSVLIVTGLTWLSWFPFILYDTDWMGREIYHGD 341
Query: 342 PKGTDPQIEAFNQGVRAGAFGLLLNSIVLGFSSFLIEPMCRKVGPRVVWVTSNFLVCIAM 401
PKGTDPQIEAFNQGVRAGAFGLLLNSIVLGFSSFLIEPMCRKVGPRVVWVTSNFLVCIAM
Sbjct: 342 PKGTDPQIEAFNQGVRAGAFGLLLNSIVLGFSSFLIEPMCRKVGPRVVWVTSNFLVCIAM 401
Query: 402 AATALISFWSLKDFHGTVQKAITADKSIKAVCLVLFAFLGVPLAVLYSVPFAVTAQLAAT 461
AATALISFWSLKDFHGTVQKAITADKSIKAVCLVLFAFLGVPLAVLYSVPFAVTAQLAAT
Sbjct: 402 AATALISFWSLKDFHGTVQKAITADKSIKAVCLVLFAFLGVPLAVLYSVPFAVTAQLAAT 461
Query: 462 RGGGQGLCTGVLNISIVIPQVVIALGAGPWDELFGKGNIPAFGLASGFALIGGVAGIFLL 521
RGGGQGLCTGVLNISIVIPQVVIALGAGPWDELFGKGNIPAFGLASGFALIGGVAGIFLL
Sbjct: 462 RGGGQGLCTGVLNISIVIPQVVIALGAGPWDELFGKGNIPAFGLASGFALIGGVAGIFLL 521
Query: 522 PKISKRQFRSVSMGGGH 538
PKISKRQFRSVSMGGGH
Sbjct: 522 PKISKRQFRSVSMGGGH 538
>Os10g0404500 Sucrose transporter
Length = 506
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/494 (72%), Positives = 409/494 (82%), Gaps = 11/494 (2%)
Query: 48 ISLGRLILSGMVAGGVQYGWALQLSLLTPYVQTLGLSHALTSFMWLCGPIAGMVVQPCVG 107
ISL L L+ MVAGGVQYGWALQLSLLTPYVQTLG+ HALTS MWLCGPIAG++VQPCVG
Sbjct: 21 ISLSGLFLACMVAGGVQYGWALQLSLLTPYVQTLGIPHALTSVMWLCGPIAGLIVQPCVG 80
Query: 108 LYSDRCTSKWGRRRPYILTGCVLICLAVVVIGFSADIGYAMGDTKEDCSVYHGSRWHAAI 167
LYSD+CTS GRRRP+ILTGC++IC++V+VIGFS+DIGYA+GDT EDC VY G R+HAA
Sbjct: 81 LYSDKCTSSLGRRRPFILTGCIIICISVIVIGFSSDIGYALGDTTEDCKVYRGPRYHAAA 140
Query: 168 VYVLGFWLLDFSNNTVQGPARALMADLSGRHGPGTANSIFCSWMAMGNILGYSSGSTNNW 227
++LGFWLLDFSNNTVQGPARALMADLSGRHGP AN+IFCSWMA+GNILGYSSGSTN+W
Sbjct: 141 AFILGFWLLDFSNNTVQGPARALMADLSGRHGPSAANAIFCSWMALGNILGYSSGSTNDW 200
Query: 228 HKWFPFLKTRACCEACANLKGAFLVAVIFLSLCLVITLIFAKEVPFKGNAALPTKSNEPA 287
HKWFPFL TRACCEACANLK AFLVAV+FL L +T++FA+EV P + +
Sbjct: 201 HKWFPFLMTRACCEACANLKAAFLVAVVFLGLSTAVTMVFAREVALD-----PVAAAKRN 255
Query: 288 EPEGTGPLAVLKGFRNLPTGMPSVLIVTGLTWLSWFPFILYDTDWMGREIYHGDPKGTDP 347
E E +G LAV KG +NLP GMPSVLIVTGLTWLSWFPFIL+DTDWMGREIYHG P G+
Sbjct: 256 EGEASGLLAVFKGMKNLPVGMPSVLIVTGLTWLSWFPFILFDTDWMGREIYHGRPDGSPA 315
Query: 348 QIEAFNQGVRAGAFGLLLNSIVLGFSSFLIEPMCRKVGPRVVWVTSNFLVCIAMAATALI 407
++ AF +GVR GAFGLLLNSIVLG SSFLIEPMCR++G R VWV S+ +VC+AMAA +++
Sbjct: 316 EVTAFQEGVRQGAFGLLLNSIVLGISSFLIEPMCRRLGARAVWVMSSAVVCVAMAAVSVL 375
Query: 408 SFWSLKDFHGTVQKAITA---DKSIKAVCLVLFAFLGVPLAVLYSVPFAVTAQLAATRGG 464
S WSL DF G+VQ A A + ++A L LF FLG+P AVL SVPFAVTAQLAA+RGG
Sbjct: 376 SAWSLGDFGGSVQDAARAPAEEGGVRASALALFVFLGLPFAVLCSVPFAVTAQLAASRGG 435
Query: 465 GQGLCTGVLNISIVIPQVVIALGAGPWDELFGKGNIPAFGLASGFALIGGVAGIFLLPKI 524
GQGLCTGVLNISIV+PQ+ IALGAGPWDELFG+GNIPAF +AS FA AG+ LLPK+
Sbjct: 436 GQGLCTGVLNISIVVPQMAIALGAGPWDELFGEGNIPAFAMASVFAAAAAAAGVVLLPKV 495
Query: 525 SKRQFRSVSMGGGH 538
S RSVSM GGH
Sbjct: 496 S---VRSVSMAGGH 506
>Os02g0827200 Sucrose transporter
Length = 595
Score = 607 bits (1565), Expect = e-174, Method: Compositional matrix adjust.
Identities = 301/534 (56%), Positives = 382/534 (71%), Gaps = 50/534 (9%)
Query: 52 RLILSGMVAGGVQYGWALQLSLLTPYVQTLGLSHALTSFMWLCGPIAGMVVQPCVGLYSD 111
+L+L+ MVA GVQ+GWALQLSLLTPY+QTLG+ HA+ SF+WLCGPI G VVQPCVG++SD
Sbjct: 61 KLVLACMVAAGVQFGWALQLSLLTPYIQTLGIDHAMASFIWLCGPITGFVVQPCVGVWSD 120
Query: 112 RCTSKWGRRRPYILTGCVLICLAVVVIGFSADIGYAMGDTKEDCSVYHGSRWHAAIVYVL 171
+C SK+GRRRP+IL GC++IC AV +IGFSAD+GY +GDT E CS Y GSR+ AAI++VL
Sbjct: 121 KCRSKYGRRRPFILAGCLMICFAVTLIGFSADLGYILGDTTEHCSTYKGSRFRAAIIFVL 180
Query: 172 GFWLLDFSNNTVQGPARALMADLSGRHGPGTANSIFCSWMAMGNILGYSSGSTNNWHKWF 231
GFW+LD +NNTVQGPARAL+ADLSG +AN+IFC+WMA+GN+LG+SSG++ NWHKWF
Sbjct: 181 GFWMLDLANNTVQGPARALLADLSGPDQCNSANAIFCTWMAVGNVLGFSSGASGNWHKWF 240
Query: 232 PFLKTRACCEACANLKGAFLVAVIFLSLCLVITLIFAKEVPFK---------------GN 276
PFL TRACCEAC+NLK AFLVAV+FL C+ +TL FA+E+P + G+
Sbjct: 241 PFLMTRACCEACSNLKAAFLVAVVFLLFCMSVTLYFAEEIPLEPTDAQRLSDSAPLLNGS 300
Query: 277 AALPTKSNEP---AEPEG---------------------------TGPLAV----LKGFR 302
SNEP A P G GP AV L R
Sbjct: 301 RDDNNASNEPRNGALPNGHTDGSNVPANSNAEDSNSNRENVEVFNDGPGAVLVNILTSMR 360
Query: 303 NLPTGMPSVLIVTGLTWLSWFPFILYDTDWMGREIYHGDPKGTDPQIEAFNQGVRAGAFG 362
+LP GM SVL+V LTWLSWFPF L+DTDWMGRE+YHGDP G + +A++ GVR GAFG
Sbjct: 361 HLPPGMYSVLLVMALTWLSWFPFFLFDTDWMGREVYHGDPNGNLSERKAYDNGVREGAFG 420
Query: 363 LLLNSIVLGFSSFLIEPMCRKVGPRVVWVTSNFLVCIAMAATALISFWSLKDFHGTVQKA 422
LLLNS+VLG SFL++P+CR +G R+VW SNF V I M ATA++S+ S + +
Sbjct: 421 LLLNSVVLGIGSFLVDPLCRLMGARLVWAISNFTVFICMLATAILSWISFDLYSSKLHHI 480
Query: 423 ITADKSIKAVCLVLFAFLGVPLAVLYSVPFAVTAQLAATRGGGQGLCTGVLNISIVIPQV 482
I A+K++K L++F+ LG+PL++ YSVPF+VTA+L A GGGQGL TGVLN++IV+PQ+
Sbjct: 481 IGANKTVKNSALIVFSLLGLPLSITYSVPFSVTAELTAGTGGGQGLATGVLNLAIVVPQI 540
Query: 483 VIALGAGPWDELFGKGNIPAFGLASGFALIGGVAGIFLLPKISKRQFRSVSMGG 536
V++LGAGPWD LFG GN+PAF LAS F+L GV + LPK+ +RS G
Sbjct: 541 VVSLGAGPWDALFGGGNVPAFALASVFSLGAGVLAVLKLPKL-PNSYRSAGFHG 593
>Os02g0576600 Sucrose transporter
Length = 535
Score = 551 bits (1421), Expect = e-157, Method: Compositional matrix adjust.
Identities = 272/493 (55%), Positives = 348/493 (70%), Gaps = 16/493 (3%)
Query: 52 RLILSGMVAGGVQYGWALQLSLLTPYVQTLGLSHALTSFMWLCGPIAGMVVQPCVGLYSD 111
RL + MVAGG+QYGWALQLSLL+PY QTLG+SH+ S W+CGPIAG VVQP VG YSD
Sbjct: 53 RLFFACMVAGGIQYGWALQLSLLSPYSQTLGISHSYVSLTWICGPIAGFVVQPIVGYYSD 112
Query: 112 RCTSKWGRRRPYILTGCVLICLAVVVIGFSADIGYAMGDTKEDCSVYHGSRWHAAIVYVL 171
RCT K GRRRP+IL GC++IC++V++IGFSADIG +GDTKE CS Y G RW AA+VY++
Sbjct: 113 RCTMKMGRRRPFILVGCLIICISVMIIGFSADIGRHLGDTKEHCSTYTGPRWSAAMVYIV 172
Query: 172 GFWLLDFSNNTVQGPARALMADLS-GRHGPGTANSIFCSWMAMGNILGYSSGSTNNWHKW 230
GFW LDF+NNTVQGPARA+MADLS G HGP SIF WMA+G++LGY SG+ WH+W
Sbjct: 173 GFWFLDFANNTVQGPARAMMADLSAGHHGPNVGQSIFSLWMAIGSVLGYLSGANGKWHEW 232
Query: 231 FPFLKTRACCEACANLKGAFLVAVIFLSLCLVITLIFAKEVPFKGNAALPTKSNEPAEPE 290
FP+LKT ACC+ACANLKGAF AV+ + + + +T+ A E+P + +
Sbjct: 233 FPWLKTAACCDACANLKGAFFTAVLLIVVSMTVTMYLADEMPL---------DKQDVDTS 283
Query: 291 GTGPLAV----LKGFRNLPTGMPSVLIVTGLTWLSWFPFILYDTDWMGREIYHGDPKGTD 346
G G AV K RNLP M VL VT +TWLSWFPFI Y+TDWMGREIYHG+P+GT
Sbjct: 284 GGGGCAVFVDLFKSLRNLPPAMFKVLAVTAVTWLSWFPFIQYNTDWMGREIYHGEPQGTA 343
Query: 347 PQIEAFNQGVRAGAFGLLLNSIVLGFSSFLIEPMCRKVGPRVVWVTSNFLVCIAMAATAL 406
+ + ++ GVR GA GLL S+ LG +SF+I +CR++ +VVW SNFLV MA
Sbjct: 344 AKADVYDAGVREGAMGLLFCSVALGVTSFVIPKLCRRLTSKVVWSISNFLVFALMAVMVA 403
Query: 407 ISFWSLKDFHGTVQKAITA-DKSIKAVCLVLFAFLGVPLAVLYSVPFAVTAQLAATRGGG 465
+ S++ + ++ +T D ++KAV LV+FA +G+P AVL+SVP+AV +++ A GGG
Sbjct: 404 VGMVSMRGYRPSLAAGLTGPDPTLKAVALVVFALIGIPQAVLFSVPWAVASEVTAEEGGG 463
Query: 466 QGLCTGVLNISIVIPQVVIALGAGPWDELFGKGNIPAFGLASGFALIGGVAGIFLLPKIS 525
QGL GVLNI+IV+PQ+VIAL AGP D F KGN PAFG+ FA I GV + LPK +
Sbjct: 464 QGLAIGVLNIAIVVPQLVIALTAGPIDGAFNKGNTPAFGIGGAFAFICGVLALIWLPK-T 522
Query: 526 KRQFRSVSMGGGH 538
+ + + GGH
Sbjct: 523 RGVSNAAVVAGGH 535
>Os12g0641400 Similar to Sucrose transporter
Length = 170
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 48 ISLGRLILSGMVAGGVQYGWALQLSLLTPYVQTLGLSHALTSFMWLCGPIAGMVVQPCVG 107
+ L +L+ + VA GVQ+GWALQLSLLTPYVQ LG+ HA S +WLCGP++G++VQP VG
Sbjct: 22 VPLRKLLRAASVACGVQFGWALQLSLLTPYVQELGIPHAFASLVWLCGPLSGLLVQPLVG 81
Query: 108 LYSDR 112
SDR
Sbjct: 82 HLSDR 86
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.141 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,361,242
Number of extensions: 823275
Number of successful extensions: 2282
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 2270
Number of HSP's successfully gapped: 6
Length of query: 538
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 432
Effective length of database: 11,501,117
Effective search space: 4968482544
Effective search space used: 4968482544
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 158 (65.5 bits)