Os02g0827200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sucrose transporter.
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Os02g0827200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sucrose transporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.67 | 0.203 | 9.99 | -0.0441 | 0.578 | 0.5 | -0.593 | 0.287 | 0.0654 | 6.78 | 29 | 71 | -- | -- |
| 18.77 | 0.202 | 9.99 | 0.0032 | 0.58 | 0.499 | -0.588 | -- | 0.0739 | 6.84 | 29.2 | 60 | -- | -- |
| 19.51 | 0.206 | 9.99 | -0.0339 | 0.584 | 0.514 | -- | 0.205 | 0.0743 | 6.98 | 28.94 | 70 | -- | -- |
| 19.56 | 0.206 | 9.99 | -5.86e-05 | 0.576 | 0.518 | -- | -- | 0.0808 | 7.02 | 29.1 | 65 | -- | -- |
| 32.81 | 0.267 | 10 | -0.0108 | -- | 0.826 | -- | 0.0958 | 0.0576 | -- | 33.21 | 311 | -- | -- |
| 22.36 | 0.222 | 10 | -0.123 | 0.667 | -- | -0.594 | -- | -0.0247 | 6.06 | -- | -- | -- | -- |
| 23.22 | 0.226 | 10 | -0.128 | 0.664 | -- | -- | -- | -0.0223 | 6.12 | -- | -- | -- | -- |
| 32.2 | 0.264 | 9.99 | 0.0971 | -- | 0.924 | -- | -- | 0.142 | -- | 31.94 | 348 | -- | -- |
| 19.56 | 0.206 | 9.99 | -- | 0.577 | 0.512 | -- | -- | 0.0806 | 7.01 | 29.1 | 60 | -- | -- |
| 46.06 | 0.317 | 10 | -0.109 | -- | -- | -- | -- | -0.0075 | -- | -- | -- | -- | -- |
| 23.66 | 0.228 | 10 | -- | 0.662 | -- | -- | -- | -0.00805 | 6.13 | -- | -- | -- | -- |
| 32.43 | 0.265 | 9.99 | -- | -- | 0.896 | -- | -- | 0.124 | -- | 32.22 | 349 | -- | -- |
| 46.37 | 0.318 | 10 | -- | -- | -- | -- | -- | 0.00463 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.20 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 2 | 16.24 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 5 | 16.36 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 20 |
| 7 | 16.39 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 8 | 16.42 | temperature | 20 | 90 | > th | dose dependent | sin | 7 | NA |
| 10 | 16.43 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 17 | 16.62 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 34 | 16.77 | temperature | 30 | 90 | < th | dose dependent | sin | 5 | NA |
| 49 | 16.85 | temperature | 30 | 90 | < th | dose dependent | sin | 7 | NA |
| 66 | 16.96 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 9 |
| 76 | 17.01 | temperature | 10 | 30 | > th | dose dependent | rect. | 6 | 23 |
| 163 | 17.23 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 177 | 17.26 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 191 | 17.30 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 14 |
| 215 | 17.35 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 16 |
| 244 | 17.42 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 18 |
| 274 | 17.49 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 13 |
| 317 | 17.61 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 318 | 17.61 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 347 | 17.69 | temperature | 25 | 90 | < th | dose independent | rect. | 1 | 20 |
| 365 | 17.73 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 9 |
| 368 | 17.74 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 411 | 17.83 | temperature | 30 | 30 | < th | dose dependent | rect. | 16 | 16 |
| 441 | 17.88 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 14 |
| 484 | 17.93 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 15 |
| 629 | 18.14 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 21 |
| 657 | 18.18 | temperature | 25 | 270 | < th | dose independent | sin | 9 | NA |
| 662 | 18.18 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 2 |
| 678 | 18.20 | temperature | 20 | 270 | < th | dose independent | rect. | 24 | 6 |
| 709 | 18.24 | temperature | 25 | 270 | > th | dose independent | sin | 8 | NA |
| 716 | 18.25 | temperature | 20 | 270 | < th | dose independent | rect. | 24 | 8 |
| 743 | 18.27 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 4 |
| 785 | 18.31 | radiation | 10 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 820 | 18.35 | radiation | 10 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 851 | 18.37 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 923 | 18.44 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |