BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0827200 Os02g0827200|AB091673
(595 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0827200 Sucrose transporter 1142 0.0
Os03g0170900 Sucrose transporter 557 e-159
Os10g0404500 Sucrose transporter 485 e-137
Os02g0576600 Sucrose transporter 480 e-135
Os12g0641400 Similar to Sucrose transporter 96 7e-20
>Os02g0827200 Sucrose transporter
Length = 595
Score = 1142 bits (2953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/595 (94%), Positives = 564/595 (94%)
Query: 1 MDSAAGGGGLTAIRLPYRHLRDAEMELVSLNGGTPRGGSPKDPDATHQQGPPAARTTTTR 60
MDSAAGGGGLTAIRLPYRHLRDAEMELVSLNGGTPRGGSPKDPDATHQQGPPAARTTTTR
Sbjct: 1 MDSAAGGGGLTAIRLPYRHLRDAEMELVSLNGGTPRGGSPKDPDATHQQGPPAARTTTTR 60
Query: 61 KLVLACMVAAGVQFGWALQLSLLTPYIQTLGIDHAMASFIWLCGPITGFVVQPCVGVWSD 120
KLVLACMVAAGVQFGWALQLSLLTPYIQTLGIDHAMASFIWLCGPITGFVVQPCVGVWSD
Sbjct: 61 KLVLACMVAAGVQFGWALQLSLLTPYIQTLGIDHAMASFIWLCGPITGFVVQPCVGVWSD 120
Query: 121 KCRSKYGRRRPFILAGCLMICFAVTLIGFSADLGYILGDTTEHCSTYKGSRFRAAIIFVL 180
KCRSKYGRRRPFILAGCLMICFAVTLIGFSADLGYILGDTTEHCSTYKGSRFRAAIIFVL
Sbjct: 121 KCRSKYGRRRPFILAGCLMICFAVTLIGFSADLGYILGDTTEHCSTYKGSRFRAAIIFVL 180
Query: 181 GFWMLDLANNTVQGPARALLADLSGPDQCNSANAIFCTWMAVGNVLGFSSGASGNWHKWF 240
GFWMLDLANNTVQGPARALLADLSGPDQCNSANAIFCTWMAVGNVLGFSSGASGNWHKWF
Sbjct: 181 GFWMLDLANNTVQGPARALLADLSGPDQCNSANAIFCTWMAVGNVLGFSSGASGNWHKWF 240
Query: 241 PFLMTRACCEACSNLKXXXXXXXXXXXXCMSVTLYFAEEIPLEPTDAQRLSDSAPLLNGS 300
PFLMTRACCEACSNLK CMSVTLYFAEEIPLEPTDAQRLSDSAPLLNGS
Sbjct: 241 PFLMTRACCEACSNLKAAFLVAVVFLLFCMSVTLYFAEEIPLEPTDAQRLSDSAPLLNGS 300
Query: 301 RDDNNASNEPRNGALPNGHTDGSNVPANSNAEDSNSNRENVEVFNDGPGAVLVNILTSMR 360
RDDNNASNEPRNGALPNGHTDGSNVPANSNAEDSNSNRENVEVFNDGPGAVLVNILTSMR
Sbjct: 301 RDDNNASNEPRNGALPNGHTDGSNVPANSNAEDSNSNRENVEVFNDGPGAVLVNILTSMR 360
Query: 361 HLPPGMYSVLLVMALTWLSWFPFFLFDTDWMGREVYHGDPNGNLSERKAYDNGVREGAFG 420
HLPPGMYSVLLVMALTWLSWFPFFLFDTDWMGREVYHGDPNGNLSERKAYDNGVREGAFG
Sbjct: 361 HLPPGMYSVLLVMALTWLSWFPFFLFDTDWMGREVYHGDPNGNLSERKAYDNGVREGAFG 420
Query: 421 LLLNSVVLGIGSFLVDPLCRLMGARLVWAISNFTVFICMLATAILSWISFDLYSSKLHHI 480
LLLNSVVLGIGSFLVDPLCRLMGARLVWAISNFTVFICMLATAILSWISFDLYSSKLHHI
Sbjct: 421 LLLNSVVLGIGSFLVDPLCRLMGARLVWAISNFTVFICMLATAILSWISFDLYSSKLHHI 480
Query: 481 IGANKTVKNSALIVFSLLGLPLSITYSVPFSVXXXXXXXXXXXXXXXXXXXNLAIVVPQI 540
IGANKTVKNSALIVFSLLGLPLSITYSVPFSV NLAIVVPQI
Sbjct: 481 IGANKTVKNSALIVFSLLGLPLSITYSVPFSVTAELTAGTGGGQGLATGVLNLAIVVPQI 540
Query: 541 VVSLGAGPWDALFGGGNVPAFALASVFSLGAGVLAVLKLPKLPNSYRSAGFHGFG 595
VVSLGAGPWDALFGGGNVPAFALASVFSLGAGVLAVLKLPKLPNSYRSAGFHGFG
Sbjct: 541 VVSLGAGPWDALFGGGNVPAFALASVFSLGAGVLAVLKLPKLPNSYRSAGFHGFG 595
>Os03g0170900 Sucrose transporter
Length = 538
Score = 557 bits (1436), Expect = e-159, Method: Compositional matrix adjust.
Identities = 279/534 (52%), Positives = 358/534 (67%), Gaps = 50/534 (9%)
Query: 61 KLVLACMVAAGVQFGWALQLSLLTPYIQTLGIDHAMASFIWLCGPITGFVVQPCVGVWSD 120
+L+L+ MVA GVQ+GWALQLSLLTPY+QTLG+ HA+ SF+WLCGPI G VVQPCVG++SD
Sbjct: 52 RLILSGMVAGGVQYGWALQLSLLTPYVQTLGLSHALTSFMWLCGPIAGMVVQPCVGLYSD 111
Query: 121 KCRSKYGRRRPFILAGCLMICFAVTLIGFSADLGYILGDTTEHCSTYKGSRFRAAIIFVL 180
+C SK+GRRRP+IL GC++IC AV +IGFSAD+GY +GDT E CS Y GSR+ AAI++VL
Sbjct: 112 RCTSKWGRRRPYILTGCVLICLAVVVIGFSADIGYAMGDTKEDCSVYHGSRWHAAIVYVL 171
Query: 181 GFWMLDLANNTVQGPARALLADLSGPDQCNSANAIFCTWMAVGNVLGFSSGASGNWHKWF 240
GFW+LD +NNTVQGPARAL+ADLSG +AN+IFC+WMA+GN+LG+SSG++ NWHKWF
Sbjct: 172 GFWLLDFSNNTVQGPARALMADLSGRHGPGTANSIFCSWMAMGNILGYSSGSTNNWHKWF 231
Query: 241 PFLMTRACCEACSNLKXXXXXXXXXXXXCMSVTLYFAEEIPLEPTDAQRLSDSAPLLNGS 300
PFL TRACCEAC+NLK C+ +TL FA+E+P + G+
Sbjct: 232 PFLKTRACCEACANLKGAFLVAVIFLSLCLVITLIFAKEVPFK---------------GN 276
Query: 301 RDDNNASNEPRNGALPNGHTDGSNVPANSNAEDSNSNRENVEVFNDGPGAVLVNILTSMR 360
SNEP A P G GP AV L R
Sbjct: 277 AALPTKSNEP---AEPEG---------------------------TGPLAV----LKGFR 302
Query: 361 HLPPGMYSVLLVMALTWLSWFPFFLFDTDWMGREVYHGDPNGNLSERKAYDNGVREGAFG 420
+LP GM SVL+V LTWLSWFPF L+DTDWMGRE+YHGDP G + +A++ GVR GAFG
Sbjct: 303 NLPTGMPSVLIVTGLTWLSWFPFILYDTDWMGREIYHGDPKGTDPQIEAFNQGVRAGAFG 362
Query: 421 LLLNSVVLGIGSFLVDPLCRLMGARLVWAISNFTVFICMLATAILSWISFDLYSSKLHHI 480
LLLNS+VLG SFL++P+CR +G R+VW SNF V I M ATA++S+ S + +
Sbjct: 363 LLLNSIVLGFSSFLIEPMCRKVGPRVVWVTSNFLVCIAMAATALISFWSLKDFHGTVQKA 422
Query: 481 IGANKTVKNSALIVFSLLGLPLSITYSVPFSVXXXXXXXXXXXXXXXXXXXNLAIVVPQI 540
I A+K++K L++F+ LG+PL++ YSVPF+V N++IV+PQ+
Sbjct: 423 ITADKSIKAVCLVLFAFLGVPLAVLYSVPFAVTAQLAATRGGGQGLCTGVLNISIVIPQV 482
Query: 541 VVSLGAGPWDALFGGGNVPAFALASVFSLGAGVLAVLKLPKLPN-SYRSAGFHG 593
V++LGAGPWD LFG GN+PAF LAS F+L GV + LPK+ +RS G
Sbjct: 483 VIALGAGPWDELFGKGNIPAFGLASGFALIGGVAGIFLLPKISKRQFRSVSMGG 536
>Os10g0404500 Sucrose transporter
Length = 506
Score = 485 bits (1249), Expect = e-137, Method: Compositional matrix adjust.
Identities = 270/535 (50%), Positives = 344/535 (64%), Gaps = 59/535 (11%)
Query: 62 LVLACMVAAGVQFGWALQLSLLTPYIQTLGIDHAMASFIWLCGPITGFVVQPCVGVWSDK 121
L LACMVA GVQ+GWALQLSLLTPY+QTLGI HA+ S +WLCGPI G +VQPCVG++SDK
Sbjct: 26 LFLACMVAGGVQYGWALQLSLLTPYVQTLGIPHALTSVMWLCGPIAGLIVQPCVGLYSDK 85
Query: 122 CRSKYGRRRPFILAGCLMICFAVTLIGFSADLGYILGDTTEHCSTYKGSRFRAAIIFVLG 181
C S GRRRPFIL GC++IC +V +IGFS+D+GY LGDTTE C Y+G R+ AA F+LG
Sbjct: 86 CTSSLGRRRPFILTGCIIICISVIVIGFSSDIGYALGDTTEDCKVYRGPRYHAAAAFILG 145
Query: 182 FWMLDLANNTVQGPARALLADLSGPDQCNSANAIFCTWMAVGNVLGFSSGASGNWHKWFP 241
FW+LD +NNTVQGPARAL+ADLSG ++ANAIFC+WMA+GN+LG+SSG++ +WHKWFP
Sbjct: 146 FWLLDFSNNTVQGPARALMADLSGRHGPSAANAIFCSWMALGNILGYSSGSTNDWHKWFP 205
Query: 242 FLMTRACCEACSNLKXXXXXXXXXXXXCMSVTLYFAEEIPLEPTDAQRLSDSAPLLNGSR 301
FLMTRACCEAC+NLK +VT+ FA E+ L+P A + R
Sbjct: 206 FLMTRACCEACANLKAAFLVAVVFLGLSTAVTMVFAREVALDPVAAAK-----------R 254
Query: 302 DDNNASNEPRNGALPNGHTDGSNVPANSNAEDSNSNRENVEVFNDGPGAVLVNILTSMRH 361
++ AS L+ + M++
Sbjct: 255 NEGEASG-------------------------------------------LLAVFKGMKN 271
Query: 362 LPPGMYSVLLVMALTWLSWFPFFLFDTDWMGREVYHGDPNGNLSERKAYDNGVREGAFGL 421
LP GM SVL+V LTWLSWFPF LFDTDWMGRE+YHG P+G+ +E A+ GVR+GAFGL
Sbjct: 272 LPVGMPSVLIVTGLTWLSWFPFILFDTDWMGREIYHGRPDGSPAEVTAFQEGVRQGAFGL 331
Query: 422 LLNSVVLGIGSFLVDPLCRLMGARLVWAISNFTVFICMLATAILSWISFDLYSSKLHHII 481
LLNS+VLGI SFL++P+CR +GAR VW +S+ V + M A ++LS S + +
Sbjct: 332 LLNSIVLGISSFLIEPMCRRLGARAVWVMSSAVVCVAMAAVSVLSAWSLGDFGGSVQDAA 391
Query: 482 GA---NKTVKNSALIVFSLLGLPLSITYSVPFSVXXXXXXXXXXXXXXXXXXXNLAIVVP 538
A V+ SAL +F LGLP ++ SVPF+V N++IVVP
Sbjct: 392 RAPAEEGGVRASALALFVFLGLPFAVLCSVPFAVTAQLAASRGGGQGLCTGVLNISIVVP 451
Query: 539 QIVVSLGAGPWDALFGGGNVPAFALASVFSLGAGVLAVLKLPKLPNSYRSAGFHG 593
Q+ ++LGAGPWD LFG GN+PAFA+ASVF+ A V+ LPK+ S RS G
Sbjct: 452 QMAIALGAGPWDELFGEGNIPAFAMASVFAAAAAAAGVVLLPKV--SVRSVSMAG 504
>Os02g0576600 Sucrose transporter
Length = 535
Score = 480 bits (1236), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/537 (46%), Positives = 325/537 (60%), Gaps = 59/537 (10%)
Query: 61 KLVLACMVAAGVQFGWALQLSLLTPYIQTLGIDHAMASFIWLCGPITGFVVQPCVGVWSD 120
+L ACMVA G+Q+GWALQLSLL+PY QTLGI H+ S W+CGPI GFVVQP VG +SD
Sbjct: 53 RLFFACMVAGGIQYGWALQLSLLSPYSQTLGISHSYVSLTWICGPIAGFVVQPIVGYYSD 112
Query: 121 KCRSKYGRRRPFILAGCLMICFAVTLIGFSADLGYILGDTTEHCSTYKGSRFRAAIIFVL 180
+C K GRRRPFIL GCL+IC +V +IGFSAD+G LGDT EHCSTY G R+ AA+++++
Sbjct: 113 RCTMKMGRRRPFILVGCLIICISVMIIGFSADIGRHLGDTKEHCSTYTGPRWSAAMVYIV 172
Query: 181 GFWMLDLANNTVQGPARALLADLS-GPDQCNSANAIFCTWMAVGNVLGFSSGASGNWHKW 239
GFW LD ANNTVQGPARA++ADLS G N +IF WMA+G+VLG+ SGA+G WH+W
Sbjct: 173 GFWFLDFANNTVQGPARAMMADLSAGHHGPNVGQSIFSLWMAIGSVLGYLSGANGKWHEW 232
Query: 240 FPFLMTRACCEACSNLKXXXXXXXXXXXXCMSVTLYFAEEIPLEPTDAQRLSDSAPLLNG 299
FP+L T ACC+AC+NLK M+VT+Y A+E+PL+ D
Sbjct: 233 FPWLKTAACCDACANLKGAFFTAVLLIVVSMTVTMYLADEMPLDKQDVD----------- 281
Query: 300 SRDDNNASNEPRNGALPNGHTDGSNVPANSNAEDSNSNRENVEVFNDGPGAVLVNILTSM 359
S VF D + S+
Sbjct: 282 -----------------------------------TSGGGGCAVFVD--------LFKSL 298
Query: 360 RHLPPGMYSVLLVMALTWLSWFPFFLFDTDWMGREVYHGDPNGNLSERKAYDNGVREGAF 419
R+LPP M+ VL V A+TWLSWFPF ++TDWMGRE+YHG+P G ++ YD GVREGA
Sbjct: 299 RNLPPAMFKVLAVTAVTWLSWFPFIQYNTDWMGREIYHGEPQGTAAKADVYDAGVREGAM 358
Query: 420 GLLLNSVVLGIGSFLVDPLCRLMGARLVWAISNFTVFICMLATAILSWISFDLYSSKLHH 479
GLL SV LG+ SF++ LCR + +++VW+ISNF VF M + +S Y L
Sbjct: 359 GLLFCSVALGVTSFVIPKLCRRLTSKVVWSISNFLVFALMAVMVAVGMVSMRGYRPSLAA 418
Query: 480 -IIGANKTVKNSALIVFSLLGLPLSITYSVPFSVXXXXXXXXXXXXXXXXXXXNLAIVVP 538
+ G + T+K AL+VF+L+G+P ++ +SVP++V N+AIVVP
Sbjct: 419 GLTGPDPTLKAVALVVFALIGIPQAVLFSVPWAVASEVTAEEGGGQGLAIGVLNIAIVVP 478
Query: 539 QIVVSLGAGPWDALFGGGNVPAFALASVFSLGAGVLAVLKLPK---LPNSYRSAGFH 592
Q+V++L AGP D F GN PAF + F+ GVLA++ LPK + N+ AG H
Sbjct: 479 QLVIALTAGPIDGAFNKGNTPAFGIGGAFAFICGVLALIWLPKTRGVSNAAVVAGGH 535
>Os12g0641400 Similar to Sucrose transporter
Length = 170
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 51/67 (76%)
Query: 55 RTTTTRKLVLACMVAAGVQFGWALQLSLLTPYIQTLGIDHAMASFIWLCGPITGFVVQPC 114
R RKL+ A VA GVQFGWALQLSLLTPY+Q LGI HA AS +WLCGP++G +VQP
Sbjct: 20 RKVPLRKLLRAASVACGVQFGWALQLSLLTPYVQELGIPHAFASLVWLCGPLSGLLVQPL 79
Query: 115 VGVWSDK 121
VG SD+
Sbjct: 80 VGHLSDR 86
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.138 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 21,646,625
Number of extensions: 963958
Number of successful extensions: 2440
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 2433
Number of HSP's successfully gapped: 8
Length of query: 595
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 489
Effective length of database: 11,501,117
Effective search space: 5624046213
Effective search space used: 5624046213
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 159 (65.9 bits)