Os03g0170900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sucrose transporter.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0170900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Sucrose transporter.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.11 | 0.349 | 13.2 | -0.768 | 1.25 | 0.307 | 0.583 | 1.77 | 0.0732 | 2.02 | 1010 | 20039 | -- | -- |
| 61.52 | 0.365 | 13.2 | -0.273 | 1.24 | 0.441 | 0.455 | -- | 0.169 | 2.05 | 1009 | 18810 | -- | -- |
| 56.4 | 0.35 | 13.2 | -0.778 | 1.26 | 0.301 | -- | 1.75 | 0.07 | 2.01 | 1010 | 20046 | -- | -- |
| 62.53 | 0.368 | 13.2 | -0.265 | 1.26 | 0.447 | -- | -- | 0.16 | 2.04 | 1009 | 18803 | -- | -- |
| 150.87 | 0.572 | 13.2 | -0.723 | -- | 0.296 | -- | 1.73 | 0.114 | -- | 1010 | 18987 | -- | -- |
| 65.06 | 0.378 | 13.2 | -0.353 | 1.24 | -- | 0.519 | -- | 0.143 | 2.02 | -- | -- | -- | -- |
| 66.09 | 0.381 | 13.2 | -0.368 | 1.24 | -- | -- | -- | 0.14 | 2.01 | -- | -- | -- | -- |
| 155.73 | 0.581 | 13.1 | -0.269 | -- | 0.303 | -- | -- | 0.253 | -- | 1010 | 15878 | -- | -- |
| 63.4 | 0.371 | 13.1 | -- | 1.26 | 0.476 | -- | -- | 0.234 | 2.02 | 1009 | 25988 | -- | -- |
| 158.59 | 0.588 | 13.1 | -0.317 | -- | -- | -- | -- | 0.169 | -- | -- | -- | -- | -- |
| 69.66 | 0.39 | 13.1 | -- | 1.23 | -- | -- | -- | 0.181 | 2 | -- | -- | -- | -- |
| 156.83 | 0.583 | 13.1 | -- | -- | 0.337 | -- | -- | 0.312 | -- | 1009 | 47520 | -- | -- |
| 161.24 | 0.593 | 13.1 | -- | -- | -- | -- | -- | 0.205 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.52 | temperature | 25 | 270 | < th | dose dependent | rect. | 5 | 6 |
| 3 | 52.55 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 9 |
| 4 | 52.63 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 10 |
| 6 | 52.72 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 2 |
| 9 | 52.93 | temperature | 25 | 270 | < th | dose independent | rect. | 3 | 9 |
| 14 | 52.98 | temperature | 25 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 44 | 53.33 | temperature | 25 | 270 | > th | dose independent | rect. | 4 | 10 |
| 66 | 53.75 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 8 |
| 67 | 53.77 | temperature | 25 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 87 | 54.01 | temperature | 25 | 10 | > th | dose dependent | sin | 3 | NA |
| 97 | 54.16 | temperature | 30 | 270 | < th | dose dependent | sin | 3 | NA |
| 119 | 54.44 | temperature | 25 | 270 | > th | dose independent | sin | 3 | NA |
| 124 | 54.50 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 135 | 54.58 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 144 | 54.61 | temperature | 25 | 270 | < th | dose independent | sin | 3 | NA |
| 173 | 54.75 | temperature | 20 | 270 | > th | dose dependent | sin | 5 | NA |
| 175 | 54.76 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 3 |
| 306 | 55.09 | temperature | 25 | 270 | > th | dose dependent | rect. | 8 | 4 |
| 323 | 55.14 | humidity | 80 | 43200 | > th | dose independent | rect. | 12 | 19 |
| 337 | 55.16 | humidity | 80 | 43200 | > th | dose independent | rect. | 13 | 17 |
| 383 | 55.24 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 12 | 12 |
| 390 | 55.25 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 12 | 10 |
| 445 | 55.34 | humidity | 80 | 43200 | < th | dose independent | rect. | 13 | 18 |
| 466 | 55.36 | humidity | 90 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 477 | 55.38 | atmosphere | 1010 | 14400 | > th | dose independent | sin | 17 | NA |
| 489 | 55.40 | atmosphere | 1010 | 14400 | < th | dose independent | sin | 17 | NA |
| 496 | 55.41 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 502 | 55.42 | humidity | 80 | 43200 | < th | dose independent | rect. | 14 | 15 |
| 513 | 55.44 | humidity | 80 | 43200 | > th | dose independent | sin | 15 | NA |
| 527 | 55.45 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 549 | 55.47 | temperature | 25 | 10 | > th | dose independent | rect. | 6 | 10 |
| 616 | 55.54 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 3 |
| 617 | 55.54 | humidity | 90 | 43200 | < th | dose dependent | rect. | 20 | 6 |
| 691 | 55.61 | humidity | 50 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 695 | 55.62 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 733 | 55.64 | humidity | 50 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 740 | 55.65 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 760 | 55.66 | humidity | 80 | 43200 | < th | dose independent | sin | 15 | NA |
| 761 | 55.66 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 876 | 55.74 | humidity | 50 | 43200 | > th | dose dependent | rect. | 20 | 6 |
| 970 | 55.79 | humidity | 50 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 993 | 55.81 | radiation | 10 | 43200 | > th | dose independent | rect. | 15 | 1 |