BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0101100 Os03g0101100|AK120839
         (313 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os03g0101100  Similar to Palmitoyl-protein thioesterase-like      605   e-173
Os10g0563000  Similar to Palmitoyl-protein thioesterase-like      456   e-128

>Os03g0101100 Similar to Palmitoyl-protein thioesterase-like
          Length = 313

 Score =  605 bits (1561), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 296/313 (94%), Positives = 296/313 (94%)

Query: 1   MAAYSXXXXXXXXXXXXXXXXXSAVPFIVLHGIGDQCANHGVAKFTRLLADCEIGSGTWD 60
           MAAYS                 SAVPFIVLHGIGDQCANHGVAKFTRLLADCEIGSGTWD
Sbjct: 1   MAAYSLVFVFVGVAVFVLAPPASAVPFIVLHGIGDQCANHGVAKFTRLLADCEIGSGTWD 60

Query: 61  SWLMPLQKQADIVCSKVKEMKELSNGYNIVGLSQGNLIGRAVVEFCDDGPPVKNFISLGG 120
           SWLMPLQKQADIVCSKVKEMKELSNGYNIVGLSQGNLIGRAVVEFCDDGPPVKNFISLGG
Sbjct: 61  SWLMPLQKQADIVCSKVKEMKELSNGYNIVGLSQGNLIGRAVVEFCDDGPPVKNFISLGG 120

Query: 121 PHAGTASVPLCGSGIFCILADSLIKMEIYSDYVQAHLAPSGYMKIPTDISDYLKGCRFLP 180
           PHAGTASVPLCGSGIFCILADSLIKMEIYSDYVQAHLAPSGYMKIPTDISDYLKGCRFLP
Sbjct: 121 PHAGTASVPLCGSGIFCILADSLIKMEIYSDYVQAHLAPSGYMKIPTDISDYLKGCRFLP 180

Query: 181 KLNNELPGERNATYKERFSSLENLVLIMFQDDAVLIPRETAWFGYYPDGGFDPVLPPQKT 240
           KLNNELPGERNATYKERFSSLENLVLIMFQDDAVLIPRETAWFGYYPDGGFDPVLPPQKT
Sbjct: 181 KLNNELPGERNATYKERFSSLENLVLIMFQDDAVLIPRETAWFGYYPDGGFDPVLPPQKT 240

Query: 241 KLYMEDWIGLKTLDDEGRVKFVSVPGGHLGISKTDMMKYIVPYLKGKDNGKAWIAATWRA 300
           KLYMEDWIGLKTLDDEGRVKFVSVPGGHLGISKTDMMKYIVPYLKGKDNGKAWIAATWRA
Sbjct: 241 KLYMEDWIGLKTLDDEGRVKFVSVPGGHLGISKTDMMKYIVPYLKGKDNGKAWIAATWRA 300

Query: 301 ITNTIGGEAFVLN 313
           ITNTIGGEAFVLN
Sbjct: 301 ITNTIGGEAFVLN 313



>Os10g0563000 Similar to Palmitoyl-protein thioesterase-like
          Length = 314

 Score =  456 bits (1172), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 214/271 (78%), Positives = 238/271 (87%), Gaps = 8/271 (2%)

Query: 23  SAVPFIVLHGIGDQCANHGVAKFTRLLAD--------CEIGSGTWDSWLMPLQKQADIVC 74
           SAVPFIVLHGIGDQC N G+A FT +L +         EIG G WDSWLMPLQ+QAD VC
Sbjct: 29  SAVPFIVLHGIGDQCENGGMASFTEMLGEWSGSKGYCIEIGRGAWDSWLMPLQEQADTVC 88

Query: 75  SKVKEMKELSNGYNIVGLSQGNLIGRAVVEFCDDGPPVKNFISLGGPHAGTASVPLCGSG 134
            KVK+MKEL  GY+IVGLSQGNLIGRAV+E+CD GPPVKNFIS+GGPHAGTASVPLCGSG
Sbjct: 89  KKVKKMKELRKGYSIVGLSQGNLIGRAVIEYCDGGPPVKNFISIGGPHAGTASVPLCGSG 148

Query: 135 IFCILADSLIKMEIYSDYVQAHLAPSGYMKIPTDISDYLKGCRFLPKLNNELPGERNATY 194
           I C+L D+LIK+EIYS+YVQAHLAPSGY+KIPTD++DYLKGC+FLPKLNNE+P ERNATY
Sbjct: 149 IVCVLIDALIKLEIYSNYVQAHLAPSGYLKIPTDMTDYLKGCKFLPKLNNEIPSERNATY 208

Query: 195 KERFSSLENLVLIMFQDDAVLIPRETAWFGYYPDGGFDPVLPPQKTKLYMEDWIGLKTLD 254
           K+RFSSLENLVLIMF+DDAVLIPRETAWFGYYPDG F PV PPQKTKLY EDWIGLK L+
Sbjct: 209 KQRFSSLENLVLIMFEDDAVLIPRETAWFGYYPDGAFSPVQPPQKTKLYTEDWIGLKALE 268

Query: 255 DEGRVKFVSVPGGHLGISKTDMMKYIVPYLK 285
           + GRVKFVSVPGGHL IS++D  KYIVPYLK
Sbjct: 269 EAGRVKFVSVPGGHLSISRSDTKKYIVPYLK 299



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.320    0.140    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,583,466
Number of extensions: 513497
Number of successful extensions: 895
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 894
Number of HSP's successfully gapped: 2
Length of query: 313
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 212
Effective length of database: 11,762,187
Effective search space: 2493583644
Effective search space used: 2493583644
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)