Os10g0563000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Palmitoyl-protein thioesterase-like.
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Os10g0563000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Palmitoyl-protein thioesterase-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.45 | 0.212 | 12.3 | -0.341 | 0.425 | -1.1 | 0.0476 | 0.000331 | 0.179 | 23.1 | 23.55 | 1490 | -- | -- |
| 20.45 | 0.211 | 12.3 | -0.339 | 0.423 | -1.1 | 0.0534 | -- | 0.181 | 23.1 | 23.43 | 1472 | -- | -- |
| 20.46 | 0.211 | 12.3 | -0.341 | 0.426 | -1.11 | -- | -0.00991 | 0.18 | 23.1 | 23.41 | 1476 | -- | -- |
| 20.46 | 0.211 | 12.3 | -0.341 | 0.422 | -1.1 | -- | -- | 0.183 | 23.1 | 23.41 | 1476 | -- | -- |
| 26.74 | 0.241 | 12.4 | -0.373 | -- | -0.996 | -- | 0.489 | 0.144 | -- | 28.46 | 887 | -- | -- |
| 34.4 | 0.275 | 12.3 | -0.0218 | 0.432 | -- | 0.0766 | -- | 0.375 | 23.3 | -- | -- | -- | -- |
| 34.42 | 0.275 | 12.3 | -0.025 | 0.431 | -- | -- | -- | 0.375 | 23.3 | -- | -- | -- | -- |
| 26.67 | 0.241 | 12.3 | -0.333 | -- | -1.09 | -- | -- | 0.136 | -- | 26.87 | 876 | -- | -- |
| 23.18 | 0.224 | 12.3 | -- | 0.418 | -0.965 | -- | -- | 0.246 | 23.3 | 23.41 | 1452 | -- | -- |
| 46.08 | 0.317 | 12.3 | -0.014 | -- | -- | -- | -- | 0.379 | -- | -- | -- | -- | -- |
| 34.44 | 0.275 | 12.3 | -- | 0.431 | -- | -- | -- | 0.378 | 23.3 | -- | -- | -- | -- |
| 29.23 | 0.252 | 12.3 | -- | -- | -0.951 | -- | -- | 0.2 | -- | 26.87 | 859 | -- | -- |
| 46.08 | 0.317 | 12.3 | -- | -- | -- | -- | -- | 0.381 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.39 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 2 | 19.47 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 3 | 19.49 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 9 |
| 10 | 19.55 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 6 |
| 15 | 19.57 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 17 | 19.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 70 | 19.66 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 187 | 19.83 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 203 | 19.87 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 204 | 19.87 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 338 | 20.16 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 12 |
| 350 | 20.18 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 402 | 20.27 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 413 | 20.28 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |
| 646 | 20.64 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |
| 669 | 20.66 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 690 | 20.69 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 743 | 20.78 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 789 | 20.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 958 | 21.08 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 965 | 21.09 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |