Os03g0101100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Palmitoyl-protein thioesterase-like.
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Os03g0101100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Palmitoyl-protein thioesterase-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.14 | 0.402 | 10.5 | -0.377 | 0.461 | -0.653 | -0.201 | -0.307 | -0.33 | 0.449 | 72 | 2813 | -- | -- |
| 73.31 | 0.399 | 10.5 | -0.404 | 0.462 | -0.654 | -0.19 | -- | -0.326 | 0.42 | 72.01 | 2815 | -- | -- |
| 73.32 | 0.399 | 10.5 | -0.376 | 0.462 | -0.648 | -- | -0.293 | -0.33 | 0.457 | 72.23 | 2812 | -- | -- |
| 72.32 | 0.396 | 10.5 | -0.39 | 0.474 | -0.762 | -- | -- | -0.35 | 0.659 | 75.88 | 2810 | -- | -- |
| 80.4 | 0.418 | 10.5 | -0.429 | -- | -0.861 | -- | -0.273 | -0.372 | -- | 75 | 2505 | -- | -- |
| 86.01 | 0.435 | 10.5 | -0.349 | 0.506 | -- | -0.061 | -- | -0.249 | 0.664 | -- | -- | -- | -- |
| 86.03 | 0.434 | 10.5 | -0.346 | 0.506 | -- | -- | -- | -0.249 | 0.666 | -- | -- | -- | -- |
| 79.58 | 0.415 | 10.5 | -0.413 | -- | -1.01 | -- | -- | -0.352 | -- | 75 | 2535 | -- | -- |
| 76.01 | 0.406 | 10.5 | -- | 0.46 | -0.849 | -- | -- | -0.314 | 0.393 | 76 | 2783 | -- | -- |
| 102.07 | 0.472 | 10.5 | -0.328 | -- | -- | -- | -- | -0.24 | -- | -- | -- | -- | -- |
| 89.19 | 0.442 | 10.5 | -- | 0.501 | -- | -- | -- | -0.211 | 0.634 | -- | -- | -- | -- |
| 81.74 | 0.421 | 10.5 | -- | -- | -1.13 | -- | -- | -0.279 | -- | 78 | 2518 | -- | -- |
| 104.91 | 0.478 | 10.5 | -- | -- | -- | -- | -- | -0.204 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.36 | humidity | 50 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 7 | 71.69 | humidity | 60 | 14400 | > th | dose dependent | rect. | 12 | 6 |
| 16 | 71.76 | humidity | 90 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 23 | 71.79 | humidity | 90 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 25 | 71.82 | humidity | 90 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 75 | 72.05 | humidity | 60 | 14400 | > th | dose dependent | rect. | 12 | 11 |
| 117 | 72.18 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 13 |
| 125 | 72.19 | humidity | 90 | 14400 | < th | dose dependent | rect. | 13 | 10 |
| 132 | 72.21 | humidity | 60 | 14400 | > th | dose dependent | sin | 19 | NA |
| 210 | 72.36 | humidity | 80 | 14400 | < th | dose independent | rect. | 8 | 13 |
| 214 | 72.36 | humidity | 80 | 14400 | > th | dose dependent | rect. | 13 | 10 |
| 268 | 72.43 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 3 |
| 332 | 72.50 | humidity | 80 | 14400 | > th | dose independent | rect. | 13 | 8 |
| 334 | 72.50 | humidity | 80 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 350 | 72.52 | humidity | 90 | 14400 | < th | dose dependent | sin | 18 | NA |
| 361 | 72.53 | humidity | 80 | 14400 | > th | dose dependent | rect. | 19 | 4 |
| 366 | 72.54 | humidity | 80 | 14400 | < th | dose independent | rect. | 13 | 8 |
| 386 | 72.56 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 7 |
| 425 | 72.60 | humidity | 80 | 14400 | > th | dose independent | sin | 21 | NA |
| 450 | 72.61 | radiation | 1 | 1440 | > th | dose dependent | rect. | 16 | 17 |
| 514 | 72.67 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 623 | 72.75 | humidity | 80 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 699 | 72.81 | humidity | 80 | 14400 | < th | dose independent | rect. | 8 | 7 |
| 714 | 72.82 | humidity | 80 | 14400 | < th | dose independent | sin | 21 | NA |
| 723 | 72.82 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 17 |
| 746 | 72.84 | humidity | 60 | 14400 | > th | dose dependent | rect. | 21 | 22 |
| 787 | 72.87 | humidity | 70 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 832 | 72.89 | humidity | 70 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 875 | 72.92 | humidity | 60 | 14400 | > th | dose dependent | no | NA | NA |