BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0101100 Os03g0101100|AK120839
(313 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G60340.1 | chr3:22304395-22306389 FORWARD LENGTH=339 405 e-113
AT5G47330.1 | chr5:19207170-19208711 FORWARD LENGTH=315 373 e-104
AT4G17480.1 | chr4:9745313-9746847 REVERSE LENGTH=305 350 6e-97
AT4G17470.1 | chr4:9742922-9744468 REVERSE LENGTH=309 347 4e-96
AT4G17483.1 | chr4:9747375-9748892 REVERSE LENGTH=301 344 3e-95
AT5G47340.1 | chr5:19209507-19211134 FORWARD LENGTH=318 335 1e-92
AT5G47350.1 | chr5:19212754-19214318 FORWARD LENGTH=317 298 2e-81
>AT3G60340.1 | chr3:22304395-22306389 FORWARD LENGTH=339
Length = 338
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/309 (62%), Positives = 235/309 (76%), Gaps = 23/309 (7%)
Query: 23 SAVPFIVLHGIGDQCANHGVAKFTRLLAD--------CEIGSGTWDSWLMPLQKQADIVC 74
S+VPFIVLHGIGD+C+N GV +FT LL+D EIG+G+WDSW MPL Q +VC
Sbjct: 21 SSVPFIVLHGIGDKCSNAGVTQFTELLSDWSGSQGYCLEIGNGSWDSWTMPLLDQTSVVC 80
Query: 75 SKVKEMKELSNGYNIVGLSQGNLIGRAVVEFCDDGPPVKNFISLGGPHAGTASVPLCGSG 134
KVK M ELS+GY+IVGLSQGN+IGRA++EFCD PPVK+F+S+ GPHAGTAS+P CG+
Sbjct: 81 EKVKSMPELSDGYSIVGLSQGNMIGRALIEFCDGAPPVKSFVSVAGPHAGTASIPFCGAT 140
Query: 135 IFCILADSLIKMEIYSDYVQAHLAPSGYMKIPTDISDYLKGCRFLPKLNNELPGERNATY 194
CI+ DS+IK EIYSDY+Q HLAPSG++KIPTDI+ Y++GCRFLPKLNNELP +N+TY
Sbjct: 141 WICIMLDSMIKAEIYSDYMQEHLAPSGFLKIPTDIAGYMEGCRFLPKLNNELP-VKNSTY 199
Query: 195 KERFSSLENLVLIMFQDDAVLIPRETAWFGYYPDGGFDPVLPPQKTKLYMEDWIGLKTLD 254
KERFSSLENLVLIMF+ D +LIP+ET+WFGYYPDG F +LPPQ+TKLY EDWIGL+TLD
Sbjct: 200 KERFSSLENLVLIMFEHDTILIPKETSWFGYYPDGSFKTILPPQETKLYTEDWIGLRTLD 259
Query: 255 DEGRVKFVSVPGGHLGISKTDMMKYIVPYL--------------KGKDNGKAWIAATWRA 300
+ G+VKFV+V G HL IS TDM K+IVPYL G + W+ +
Sbjct: 260 EAGKVKFVNVSGNHLQISHTDMKKHIVPYLCDKSSSSSSTTMAVSGSSSSHQWLPSVGNI 319
Query: 301 ITNTIGGEA 309
I + IG E
Sbjct: 320 IMDLIGPEV 328
>AT5G47330.1 | chr5:19207170-19208711 FORWARD LENGTH=315
Length = 314
Score = 373 bits (958), Expect = e-104, Method: Compositional matrix adjust.
Identities = 170/272 (62%), Positives = 217/272 (79%), Gaps = 8/272 (2%)
Query: 24 AVPFIVLHGIGDQCANHGVAKFTRLLADC--------EIGSGTWDSWLMPLQKQADIVCS 75
+VPFI+LHGI QC+N A FT+LL + EIG+G DSWLMPL +QA+I C
Sbjct: 26 SVPFIMLHGISAQCSNARDANFTQLLTNLSGSPGFCLEIGNGVADSWLMPLTRQAEIACE 85
Query: 76 KVKEMKELSNGYNIVGLSQGNLIGRAVVEFCDDGPPVKNFISLGGPHAGTASVPLCGSGI 135
KVK+MKELS GYNIVG SQGNL+ R ++EFCD GPPV N+ISL GPHAG +SVP+CGSG+
Sbjct: 86 KVKQMKELSQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAGISSVPMCGSGL 145
Query: 136 FCILADSLIKMEIYSDYVQAHLAPSGYMKIPTDISDYLKGCRFLPKLNNELPGERNATYK 195
FC LAD LIK +IYSD++Q HLAPSGY+KIPTD++ YL ++LPKLNNE+P +RN TYK
Sbjct: 146 FCKLADELIKGDIYSDFIQDHLAPSGYLKIPTDMTKYLGSSKYLPKLNNEIPDQRNQTYK 205
Query: 196 ERFSSLENLVLIMFQDDAVLIPRETAWFGYYPDGGFDPVLPPQKTKLYMEDWIGLKTLDD 255
+RF+SL NLVLI FQ D V++P++++WFG+YPDG F+P+L Q+TKLY EDWIGLKTLDD
Sbjct: 206 DRFTSLHNLVLIKFQGDKVIVPKDSSWFGFYPDGEFEPLLSAQQTKLYTEDWIGLKTLDD 265
Query: 256 EGRVKFVSVPGGHLGISKTDMMKYIVPYLKGK 287
G+VKFVSV G H+ + D++K++VPYL+ +
Sbjct: 266 AGKVKFVSVAGEHIRMVDEDVVKHVVPYLQDQ 297
>AT4G17480.1 | chr4:9745313-9746847 REVERSE LENGTH=305
Length = 304
Score = 350 bits (898), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 160/272 (58%), Positives = 209/272 (76%), Gaps = 13/272 (4%)
Query: 24 AVPFIVLHGIGDQCANHGVAKFTRLLADC--------EIGSGTWDSWLMPLQKQADIVCS 75
+VPFI+ HGI DQC+N GV+ F +LL++ EIG+G DS MPL +QA + C
Sbjct: 25 SVPFILFHGIRDQCSNGGVSSFVQLLSNLSSSHGSCLEIGNGEQDSVTMPLTQQASVACE 84
Query: 76 KVKEMKELSNGYNIVGLSQGNLIGRAVVEFCDDGPPVKNFISLGGPHAGTASVPLCGSGI 135
KVK+MK+LS GYNIV SQGNL+ R ++EFCD+ PPV N+ISLGGPHAG + +P C S +
Sbjct: 85 KVKQMKDLSQGYNIVAQSQGNLVARGLIEFCDNAPPVFNYISLGGPHAGISDIPKCNSTL 144
Query: 136 FCILADSLIKMEIYSDYVQAHLAPSGYMKIPTDISDYLKGCRFLPKLNNELPGERNATYK 195
C L+K +Y+D+VQ H+APSGY+KIPTDI DYL+ ++LPK+NNE P ERN T+K
Sbjct: 145 -C----ELLKTAVYTDFVQDHIAPSGYIKIPTDIKDYLEHSKYLPKINNERPNERNTTFK 199
Query: 196 ERFSSLENLVLIMFQDDAVLIPRETAWFGYYPDGGFDPVLPPQKTKLYMEDWIGLKTLDD 255
+RF+SL NLVL+MF+ DAV+IP+E++WFGYYPDG P+L PQ+TKLY EDWIGLKTLD
Sbjct: 200 DRFTSLHNLVLVMFEGDAVVIPKESSWFGYYPDGASTPLLSPQQTKLYTEDWIGLKTLDA 259
Query: 256 EGRVKFVSVPGGHLGISKTDMMKYIVPYLKGK 287
+VKFVSVPG HL I++ D++K++VPYLK +
Sbjct: 260 ARKVKFVSVPGEHLRIAQDDVVKHVVPYLKNQ 291
>AT4G17470.1 | chr4:9742922-9744468 REVERSE LENGTH=309
Length = 308
Score = 347 bits (891), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 157/274 (57%), Positives = 207/274 (75%), Gaps = 11/274 (4%)
Query: 24 AVPFIVLHGIGDQCANHGVAKFTRLLAD--------CEIGSGTWDSWLMPLQKQADIVCS 75
+VPF++ HG G +C+N V+ T+ L + EIG G DS MPL++QA I C
Sbjct: 26 SVPFVLFHGFGGECSNDKVSNLTQFLINHSGYPGTCVEIGDGVKDSLFMPLRQQASIACE 85
Query: 76 KVKEMKELSNGYNIVGLSQGNLIGRAVVEFCDDGPPVKNFISLGGPHAGTASVPLCGSGI 135
K+K+M ELS GYNIV SQGNL+ R ++EFCD+ PPV N++SLGGPHAG A++P
Sbjct: 86 KIKQMPELSEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAGVAAIPEGCDSA 145
Query: 136 FCILADSLIKMEIYSDYVQAHLAPSGYMKIPTDISDYLKGCRFLPKLNNELPGERNATYK 195
FCIL + + IYSD+ Q H APSGY+K P +I +YL+ ++LPKLNNE PGE+N+T+K
Sbjct: 146 FCILMKAFFAV-IYSDFAQDHTAPSGYVKKPMEIKNYLEHSKYLPKLNNERPGEKNSTFK 204
Query: 196 ERFSSLENLVLIMFQDDAVLIPRETAWFGYYPDGGFD--PVLPPQKTKLYMEDWIGLKTL 253
+RF+SL+NLVLIMFQ+D +L+PRET+WFGYYPDG PVLPPQKTKLY EDWIGLKTL
Sbjct: 205 DRFTSLQNLVLIMFQNDTILVPRETSWFGYYPDGASSSTPVLPPQKTKLYTEDWIGLKTL 264
Query: 254 DDEGRVKFVSVPGGHLGISKTDMMKYIVPYLKGK 287
DD G+V+F+SVPGGH+ I++ D++KY+VPYL+ +
Sbjct: 265 DDAGKVRFISVPGGHIEITEEDLVKYVVPYLQNE 298
>AT4G17483.1 | chr4:9747375-9748892 REVERSE LENGTH=301
Length = 300
Score = 344 bits (883), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 157/269 (58%), Positives = 206/269 (76%), Gaps = 9/269 (3%)
Query: 24 AVPFIVLHGIGDQCANHGVAKFTRLLADC--------EIGSGTWDSWLMPLQKQADIVCS 75
++PFI+ HGIGD+C+ GV+ FT+LL + EIG+G DSW MPL+KQ + C
Sbjct: 28 SIPFILFHGIGDKCSG-GVSNFTQLLTNLSGSPGYCLEIGNGEKDSWFMPLRKQTSVACE 86
Query: 76 KVKEMKELSNGYNIVGLSQGNLIGRAVVEFCDDGPPVKNFISLGGPHAGTASVPLCGSGI 135
KVK MK LS GYNIV SQGNL+ R ++EFCD+ PPV N+ISLGGPHAG A +P C SG
Sbjct: 87 KVKAMKVLSQGYNIVAESQGNLVARGLIEFCDNAPPVINYISLGGPHAGIAKIPKCNSGP 146
Query: 136 FCILADSLIKMEIYSDYVQAHLAPSGYMKIPTDISDYLKGCRFLPKLNNELPGERNATYK 195
C + ++L+K+E+Y+D+VQ H+APSGY+KIP +IS YL+ ++LPKLNNE P ERN+T+K
Sbjct: 147 ICAIGEALLKLEVYTDFVQDHIAPSGYIKIPGEISKYLEHSKYLPKLNNERPDERNSTFK 206
Query: 196 ERFSSLENLVLIMFQDDAVLIPRETAWFGYYPDGGFDPVLPPQKTKLYMEDWIGLKTLDD 255
+RF++L NLVL+MF+ D +LIP+ETAWFGYY D GFD +L Q+TKLY EDWIGLK LD
Sbjct: 207 DRFTNLHNLVLVMFESDTMLIPKETAWFGYYEDEGFDTLLSAQQTKLYREDWIGLKALDA 266
Query: 256 EGRVKFVSVPGGHLGISKTDMMKYIVPYL 284
G+VKF SV G HL IS ++++++VPYL
Sbjct: 267 AGKVKFESVLGDHLSISDEEVVEFVVPYL 295
>AT5G47340.1 | chr5:19209507-19211134 FORWARD LENGTH=318
Length = 317
Score = 335 bits (860), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 158/276 (57%), Positives = 205/276 (74%), Gaps = 12/276 (4%)
Query: 24 AVPFIVLHGIGDQCANHGVAKFTRLLADC--------EIGSGTWDSWLMPLQKQADIVCS 75
+VPFI+LHGI QC++ A FT+LL + EIG+G +S +PL +QA+I C
Sbjct: 25 SVPFIMLHGIASQCSDDTNANFTQLLTNLSGSPGFCLEIGNGVINSMFLPLTQQAEIACE 84
Query: 76 KVKEMKELSNGYNIVGLSQGNLIGRAVVEFCDDGPPVKNFISLGGPHAGTASVP--LCG- 132
VKEMKELS GYNIVG SQGNL+ R ++EFCD GPPV N+ISL GPHAG +S+P LCG
Sbjct: 85 NVKEMKELSQGYNIVGRSQGNLVARGLIEFCDGGPPVFNYISLAGPHAGISSLPRGLCGL 144
Query: 133 -SGIFCILADSLIKMEIYSDYVQAHLAPSGYMKIPTDISDYLKGCRFLPKLNNELPGERN 191
S C + LIK +YS+ +Q HLAPSGY KIP D+ YL+ ++LPKLNNE+P +RN
Sbjct: 145 TSDPACKKFNELIKGALYSETIQDHLAPSGYYKIPNDMKQYLERSKYLPKLNNEIPNQRN 204
Query: 192 ATYKERFSSLENLVLIMFQDDAVLIPRETAWFGYYPDGGFDPVLPPQKTKLYMEDWIGLK 251
TYK+RF+SL NLVL+ FQDD V+ P ++ WFG+YPDG F+ +L +TKLY EDWIGLK
Sbjct: 205 QTYKDRFTSLHNLVLVKFQDDEVITPNDSTWFGFYPDGEFETLLSANQTKLYTEDWIGLK 264
Query: 252 TLDDEGRVKFVSVPGGHLGISKTDMMKYIVPYLKGK 287
TLDD G+VKFVSVPGGH+ +++ D++KY+VPYL+ +
Sbjct: 265 TLDDAGKVKFVSVPGGHVRMAEEDVVKYVVPYLQNQ 300
>AT5G47350.1 | chr5:19212754-19214318 FORWARD LENGTH=317
Length = 316
Score = 298 bits (763), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 141/269 (52%), Positives = 197/269 (73%), Gaps = 11/269 (4%)
Query: 33 IGDQCANHGVAKFTRLLAD--------CEIGSGT--WDSWLMPLQKQADIVCSKVKEMKE 82
IG QC++ A FT+LL++ EIG G SWL+PL +QA++ C KV +M+E
Sbjct: 34 IGTQCSDAPNANFTQLLSNLSSSPGFCIEIGEGNPIGASWLIPLTQQAEVACDKVTQMEE 93
Query: 83 LSNGYNIVGLSQGNLIGRAVVEFCDDGPPVKNFISLGGPHAGTASVPLCG-SGIFCILAD 141
LS GYNIVG +QG+L+ R ++EFC+ GPPV N+ISL GPHAGTA + C SG+ C +A+
Sbjct: 94 LSQGYNIVGRAQGSLVARGLIEFCEGGPPVHNYISLAGPHAGTADLLRCNTSGLICDIAN 153
Query: 142 SLIKMEIYSDYVQAHLAPSGYMKIPTDISDYLKGCRFLPKLNNELPGERNATYKERFSSL 201
+ K YSD+VQ +LAPSGY K P +++ YLK C++LPKLNNE P ERN TYK+RF+SL
Sbjct: 154 GIGKENPYSDFVQDNLAPSGYFKNPKNVTGYLKDCQYLPKLNNERPYERNTTYKDRFASL 213
Query: 202 ENLVLIMFQDDAVLIPRETAWFGYYPDGGFDPVLPPQKTKLYMEDWIGLKTLDDEGRVKF 261
+NLV ++F++D V++P+E++WFG+YPDG VLP Q+TKLY+EDWIGLK L G+V+F
Sbjct: 214 QNLVFVLFENDTVIVPKESSWFGFYPDGDLTHVLPVQETKLYIEDWIGLKALVVAGKVQF 273
Query: 262 VSVPGGHLGISKTDMMKYIVPYLKGKDNG 290
V+V G HL ++ D++KY+VP L+ + +
Sbjct: 274 VNVTGDHLIMADEDLVKYVVPLLQDQQSA 302
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.140 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,195,065
Number of extensions: 320574
Number of successful extensions: 603
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 590
Number of HSP's successfully gapped: 7
Length of query: 313
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 215
Effective length of database: 8,419,801
Effective search space: 1810257215
Effective search space used: 1810257215
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)