BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0784100 Os02g0784100|Os02g0784100
         (1303 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0784100  Tetratricopeptide-like helical domain containi...  2559   0.0  
Os02g0782800  Conserved hypothetical protein                      599   e-171

>Os02g0784100 Tetratricopeptide-like helical domain containing protein
          Length = 1303

 Score = 2559 bits (6632), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1244/1280 (97%), Positives = 1244/1280 (97%)

Query: 24   YREAVAEGNREEEARWANVIGDIHKRRGEYVEALRWLRIDYEVSVKYLPQRHLLPSCQSL 83
            YREAVAEGNREEEARWANVIGDIHKRRGEYVEALRWLRIDYEVSVKYLPQRHLLPSCQSL
Sbjct: 24   YREAVAEGNREEEARWANVIGDIHKRRGEYVEALRWLRIDYEVSVKYLPQRHLLPSCQSL 83

Query: 84   GEVHLRLGNSSEALTYQKKHLQLAKEADDLVEQQRGSTQLGRTYYEILLRSENDHSAIRN 143
            GEVHLRLGNSSEALTYQKKHLQLAKEADDLVEQQRGSTQLGRTYYEILLRSENDHSAIRN
Sbjct: 84   GEVHLRLGNSSEALTYQKKHLQLAKEADDLVEQQRGSTQLGRTYYEILLRSENDHSAIRN 143

Query: 144  AKKYFKSSMKLARVLKENPSSQKSLFLKELIDAYNNMGMLELELDNYEEAEKLLVQGLKI 203
            AKKYFKSSMKLARVLKENPSSQKSLFLKELIDAYNNMGMLELELDNYEEAEKLLVQGLKI
Sbjct: 144  AKKYFKSSMKLARVLKENPSSQKSLFLKELIDAYNNMGMLELELDNYEEAEKLLVQGLKI 203

Query: 204  CDEEEVHQYDDARSRLHHNLGNVYIELRNWNRAKGHIEKDIEICRKIRHTQGEAKGFINL 263
            CDEEEVHQYDDARSRLHHNLGNVYIELRNWNRAKGHIEKDIEICRKIRHTQGEAKGFINL
Sbjct: 204  CDEEEVHQYDDARSRLHHNLGNVYIELRNWNRAKGHIEKDIEICRKIRHTQGEAKGFINL 263

Query: 264  GEVHSRVQKYEDAKLCYNKALQITKCLEDEDALMDQIHQNIETVTKAAKVLEEMKIYEQK 323
            GEVHSRVQKYEDAKLCYNKALQITKCLEDEDALMDQIHQNIETVTKAAKVLEEMKIYEQK
Sbjct: 264  GEVHSRVQKYEDAKLCYNKALQITKCLEDEDALMDQIHQNIETVTKAAKVLEEMKIYEQK 323

Query: 324  LKKLARDTSNARGTSKERKLLLEQYAWLANLMEKARMITAWPKLKEFSKGQKRVANELHD 383
            LKKLARDTSNARGTSKERKLLLEQYAWLANLMEKARMITAWPKLKEFSKGQKRVANELHD
Sbjct: 324  LKKLARDTSNARGTSKERKLLLEQYAWLANLMEKARMITAWPKLKEFSKGQKRVANELHD 383

Query: 384  KEKQSDSLLVIGESYQKLRNFSKARKWCMKSWNMYRSIGNLEGQALAKVNIGNVLDSCGD 443
            KEKQSDSLLVIGESYQKLRNFSKARKWCMKSWNMYRSIGNLEGQALAKVNIGNVLDSCGD
Sbjct: 384  KEKQSDSLLVIGESYQKLRNFSKARKWCMKSWNMYRSIGNLEGQALAKVNIGNVLDSCGD 443

Query: 444  WAGGLSNVQLDALENMHYSHMVRFDNIEEAKKLQQEIDNLKRMSDQHEARDTVSDYCSET 503
            WAGGLSNVQLDALENMHYSHMVRFDNIEEAKKLQQEIDNLKRMSDQHEARDTVSDYCSET
Sbjct: 444  WAGGLSNVQLDALENMHYSHMVRFDNIEEAKKLQQEIDNLKRMSDQHEARDTVSDYCSET 503

Query: 504  ESEDGNVSDNILNTEDNDGNIANNSSEEFDDDVVLASLVHKSRSSKTKASKMHSSTKNVD 563
            ESEDGNVSDNILNTEDNDGNIANNSSEEFDDDVVLASLVHKSRSSKTKASKMHSSTKNVD
Sbjct: 504  ESEDGNVSDNILNTEDNDGNIANNSSEEFDDDVVLASLVHKSRSSKTKASKMHSSTKNVD 563

Query: 564  GSCGMDESPEEDVSKSFSNHYGRKRVRVVISDDEAEEAPEIDQSKRTLTGRADSLSTSER 623
            GSCGMDESPEEDVSKSFSNHYGRKRVRVVISDDEAEEAPEIDQSKRTLTGRADSLSTSER
Sbjct: 564  GSCGMDESPEEDVSKSFSNHYGRKRVRVVISDDEAEEAPEIDQSKRTLTGRADSLSTSER 623

Query: 624  IANTANRNRNQHTSHPIETREVDSVCTPCPAEESICSFKSGSPVCHGNDGPDLGASSIGK 683
            IANTANRNRNQHTSHPIETREVDSVCTPCPAEESICSFKSGSPVCHGNDGPDLGASSIGK
Sbjct: 624  IANTANRNRNQHTSHPIETREVDSVCTPCPAEESICSFKSGSPVCHGNDGPDLGASSIGK 683

Query: 684  LSVSKPAASGSKVGTLASNSRPQGQNAVGLQSSDADHKFWVFKIGEHLVYLDANACTREG 743
            LSVSKPAASGSKVGTLASNSRPQGQNAVGLQSSDADHKFWVFKIGEHLVYLDANACTREG
Sbjct: 684  LSVSKPAASGSKVGTLASNSRPQGQNAVGLQSSDADHKFWVFKIGEHLVYLDANACTREG 743

Query: 744  AFSIESLKVEVACVYYLQIPDDKRSKGLLPIIGELKCCGKVLDDTDSRDYIDQLASEQKS 803
            AFSIESLKVEVACVYYLQIPDDKRSKGLLPIIGELKCCGKVLDDTDSRDYIDQLASEQKS
Sbjct: 744  AFSIESLKVEVACVYYLQIPDDKRSKGLLPIIGELKCCGKVLDDTDSRDYIDQLASEQKS 803

Query: 804  IDVVIDVIPHLIYHVYNEDWVPKRLMKLYVDFCTKLSEAPXXXXXXXXXXXEVSEDEVIV 863
            IDVVIDVIPHLIYHVYNEDWVPKRLMKLYVDFCTKLSEAP           EVSEDEVIV
Sbjct: 804  IDVVIDVIPHLIYHVYNEDWVPKRLMKLYVDFCTKLSEAPNKKLLKKLYNLEVSEDEVIV 863

Query: 864  SDCGLQDLSITPFLDALKLHKTIAVLDLSHNMLGNQTIERLQQIFSSSSQTYGGLTLDLH 923
            SDCGLQDLSITPFLDALKLHKTIAVLDLSHNMLGNQTIERLQQIFSSSSQTYGGLTLDLH
Sbjct: 864  SDCGLQDLSITPFLDALKLHKTIAVLDLSHNMLGNQTIERLQQIFSSSSQTYGGLTLDLH 923

Query: 924  CNRFGPTALFQVFLLSLNLFIKVKLQICECAVMTNRLEVLNLSGNRLTDACGSYLFTVLQ 983
            CNRFGPTALFQVFLLSLNLFIKVKLQICECAVMTNRLEVLNLSGNRLTDACGSYLFTVLQ
Sbjct: 924  CNRFGPTALFQVFLLSLNLFIKVKLQICECAVMTNRLEVLNLSGNRLTDACGSYLFTVLQ 983

Query: 984  KCKECVFCLHIVTALYSLNVEQCSITSRTVQKMADALHEGSVLSHLSLGNNNPISGNTMX 1043
            KCKECVFCLHIVTALYSLNVEQCSITSRTVQKMADALHEGSVLSHLSLGNNNPISGNTM 
Sbjct: 984  KCKECVFCLHIVTALYSLNVEQCSITSRTVQKMADALHEGSVLSHLSLGNNNPISGNTML 1043

Query: 1044 XXXXXXXXXXRFSELSLTGIKLNKLMADKLCLLAQSSCLSGFLLGGTNIGSGCEAIGVLL 1103
                      RFSELSLTGIKLNKLMADKLCLLAQSSCLSGFLLGGTNIGSGCEAIGVLL
Sbjct: 1044 SLLSKLASLKRFSELSLTGIKLNKLMADKLCLLAQSSCLSGFLLGGTNIGSGCEAIGVLL 1103

Query: 1104 SNPQCSLRSLTLDRCNLGLAGIVGIIQALAGNDRLEELRIAENTNLALQRTLQYDEDAQD 1163
            SNPQCSLRSLTLDRCNLGLAGIVGIIQALAGNDRLEELRIAENTNLALQRTLQYDEDAQD
Sbjct: 1104 SNPQCSLRSLTLDRCNLGLAGIVGIIQALAGNDRLEELRIAENTNLALQRTLQYDEDAQD 1163

Query: 1164 VSPGTDQNQRTNAEANDRIDPDKMEVPDSEDEEAVYEDTRAATGSDGXXXXXXXXXXXXX 1223
            VSPGTDQNQRTNAEANDRIDPDKMEVPDSEDEEAVYEDTRAATGSDG             
Sbjct: 1164 VSPGTDQNQRTNAEANDRIDPDKMEVPDSEDEEAVYEDTRAATGSDGSCASSCQRNSSSG 1223

Query: 1224 XHAIQELADAIISAKQLKVLDLSRNGLSEEDIQSLYSAWASGPRGDGMARRHVAKEVVHF 1283
             HAIQELADAIISAKQLKVLDLSRNGLSEEDIQSLYSAWASGPRGDGMARRHVAKEVVHF
Sbjct: 1224 CHAIQELADAIISAKQLKVLDLSRNGLSEEDIQSLYSAWASGPRGDGMARRHVAKEVVHF 1283

Query: 1284 AVDGMNCCGLKPCCRRDLQM 1303
            AVDGMNCCGLKPCCRRDLQM
Sbjct: 1284 AVDGMNCCGLKPCCRRDLQM 1303



>Os02g0782800 Conserved hypothetical protein
          Length = 441

 Score =  599 bits (1545), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 324/466 (69%), Positives = 338/466 (72%), Gaps = 82/466 (17%)

Query: 895  MLGNQTIERLQQIFSSSSQTYGGLTLDLHCNRFGPTALFQVFLLSLNLFIKVKLQICECA 954
            MLGNQTIERLQQIFSSSSQTYGGLTLDLHCNRFGPTALFQ               ICECA
Sbjct: 1    MLGNQTIERLQQIFSSSSQTYGGLTLDLHCNRFGPTALFQ---------------ICECA 45

Query: 955  VMTNRLEVLNLSGNRLTDACGSYLFTVLQKCKECVFCLHIVTALYSLNVEQCSITSRTVQ 1014
            VMTNRLEVLNLSGNRLTDACGSYLFT+LQKCK          ALYSLNVEQCSITSRTVQ
Sbjct: 46   VMTNRLEVLNLSGNRLTDACGSYLFTILQKCK----------ALYSLNVEQCSITSRTVQ 95

Query: 1015 KMADALHEGSVLSHLSLGNNNPISGNTMXXXXXXXXXXXRFSELS-----LTGIKLNKL- 1068
            KMADALHEGS LSHLSLGNNNPISGNTM           RFSELS     L+ + ++KL 
Sbjct: 96   KMADALHEGSALSHLSLGNNNPISGNTMLSLLSKLASLKRFSELSLTGIKLSKLMVDKLC 155

Query: 1069 -MADKLCL-------------------------------LAQSSC-------------LS 1083
             +A   CL                               L  S+C             LS
Sbjct: 156  VLAQSSCLSGFLLGGTYIGSGGATKLTEALSCASQELLRLDLSNCGLTTPDFSQLCTNLS 215

Query: 1084 GFLLGGTNIGSG------CEAIGVLLSNPQCSLRSLTLDRCNLGLAGIVGIIQALAGNDR 1137
               +   N+G        C+AI  LLSNPQCSLRSLTLDRCNLGLAG VGIIQALAGND+
Sbjct: 216  QINIVDLNLGGNSFTLEECDAIRALLSNPQCSLRSLTLDRCNLGLAGTVGIIQALAGNDQ 275

Query: 1138 LEELRIAENTNLALQRTLQYDEDAQDVSPGTDQNQRTNAEANDRIDPDKMEVPDSEDEEA 1197
            LEELR+AENTNLALQRTLQYDEDAQDVSPGTDQNQRTNAEAND IDPDKMEVPDSEDEEA
Sbjct: 276  LEELRVAENTNLALQRTLQYDEDAQDVSPGTDQNQRTNAEANDHIDPDKMEVPDSEDEEA 335

Query: 1198 VYEDTRAATGSDGXXXXXXXXXXXXXXHAIQELADAIISAKQLKVLDLSRNGLSEEDIQS 1257
            V+EDTRAATG DG              HAIQELADAIISAKQLKVLDLSRNGLSEEDIQS
Sbjct: 336  VHEDTRAATGPDGSCASSCQRNSSSGCHAIQELADAIISAKQLKVLDLSRNGLSEEDIQS 395

Query: 1258 LYSAWASGPRGDGMARRHVAKEVVHFAVDGMNCCGLKPCCRRDLQM 1303
            LYSAWASGPRGDGMAR+HVAKEVVHFAVDGMNCCGLKPCCRRDLQM
Sbjct: 396  LYSAWASGPRGDGMARKHVAKEVVHFAVDGMNCCGLKPCCRRDLQM 441



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.315    0.131    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 40,236,769
Number of extensions: 1659434
Number of successful extensions: 6313
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6301
Number of HSP's successfully gapped: 3
Length of query: 1303
Length of database: 17,035,801
Length adjustment: 113
Effective length of query: 1190
Effective length of database: 11,135,619
Effective search space: 13251386610
Effective search space used: 13251386610
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 162 (67.0 bits)