BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0782800 Os02g0782800|AK064434
         (441 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0782800  Conserved hypothetical protein                      838   0.0  
Os02g0784100  Tetratricopeptide-like helical domain containi...   597   e-171

>Os02g0782800 Conserved hypothetical protein
          Length = 441

 Score =  838 bits (2164), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/441 (94%), Positives = 416/441 (94%)

Query: 1   MLGNQTIERLQQIFSSSSQTYGGLTLDLHCNRFGPTALFQICECAVMTNRLEVLNLSGNR 60
           MLGNQTIERLQQIFSSSSQTYGGLTLDLHCNRFGPTALFQICECAVMTNRLEVLNLSGNR
Sbjct: 1   MLGNQTIERLQQIFSSSSQTYGGLTLDLHCNRFGPTALFQICECAVMTNRLEVLNLSGNR 60

Query: 61  LTDACGSYLFTILQKCKALYSLNVEQCSITSRTVQKMADALHEGSALSHLSLGNNNPISG 120
           LTDACGSYLFTILQKCKALYSLNVEQCSITSRTVQKMADALHEGSALSHLSLGNNNPISG
Sbjct: 61  LTDACGSYLFTILQKCKALYSLNVEQCSITSRTVQKMADALHEGSALSHLSLGNNNPISG 120

Query: 121 NTMXXXXXXXXXXXRFSELSLTGIKLSKLMVDKLCVLAQSSCLSGFLLGGTYIGSGGATK 180
           NTM           RFSELSLTGIKLSKLMVDKLCVLAQSSCLSGFLLGGTYIGSGGATK
Sbjct: 121 NTMLSLLSKLASLKRFSELSLTGIKLSKLMVDKLCVLAQSSCLSGFLLGGTYIGSGGATK 180

Query: 181 LTEALSCASQELLRLDLSNCGLTTPDFSQLCTNLSQINIVDLNLGGNSFTLEECDAIRAL 240
           LTEALSCASQELLRLDLSNCGLTTPDFSQLCTNLSQINIVDLNLGGNSFTLEECDAIRAL
Sbjct: 181 LTEALSCASQELLRLDLSNCGLTTPDFSQLCTNLSQINIVDLNLGGNSFTLEECDAIRAL 240

Query: 241 LSNPQCSLRSLTLDRCNLGLAGTVGIIQALAGNDQLEELRVAENTNLALQRTLQYDEDAQ 300
           LSNPQCSLRSLTLDRCNLGLAGTVGIIQALAGNDQLEELRVAENTNLALQRTLQYDEDAQ
Sbjct: 241 LSNPQCSLRSLTLDRCNLGLAGTVGIIQALAGNDQLEELRVAENTNLALQRTLQYDEDAQ 300

Query: 301 DVSPGTDQNQRTNAEANDHIDPDKMEVPDSEDEEAVHEDTRAATGPDGXXXXXXXXXXXX 360
           DVSPGTDQNQRTNAEANDHIDPDKMEVPDSEDEEAVHEDTRAATGPDG            
Sbjct: 301 DVSPGTDQNQRTNAEANDHIDPDKMEVPDSEDEEAVHEDTRAATGPDGSCASSCQRNSSS 360

Query: 361 XXHAIQELADAIISAKQLKVLDLSRNGLSEEDIQSLYSAWASGPRGDGMARKHVAKEVVH 420
             HAIQELADAIISAKQLKVLDLSRNGLSEEDIQSLYSAWASGPRGDGMARKHVAKEVVH
Sbjct: 361 GCHAIQELADAIISAKQLKVLDLSRNGLSEEDIQSLYSAWASGPRGDGMARKHVAKEVVH 420

Query: 421 FAVDGMNCCGLKPCCRRDLQM 441
           FAVDGMNCCGLKPCCRRDLQM
Sbjct: 421 FAVDGMNCCGLKPCCRRDLQM 441



>Os02g0784100 Tetratricopeptide-like helical domain containing protein
          Length = 1303

 Score =  597 bits (1539), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 324/466 (69%), Positives = 338/466 (72%), Gaps = 82/466 (17%)

Query: 1    MLGNQTIERLQQIFSSSSQTYGGLTLDLHCNRFGPTALFQ---------------ICECA 45
            MLGNQTIERLQQIFSSSSQTYGGLTLDLHCNRFGPTALFQ               ICECA
Sbjct: 895  MLGNQTIERLQQIFSSSSQTYGGLTLDLHCNRFGPTALFQVFLLSLNLFIKVKLQICECA 954

Query: 46   VMTNRLEVLNLSGNRLTDACGSYLFTILQKCK----------ALYSLNVEQCSITSRTVQ 95
            VMTNRLEVLNLSGNRLTDACGSYLFT+LQKCK          ALYSLNVEQCSITSRTVQ
Sbjct: 955  VMTNRLEVLNLSGNRLTDACGSYLFTVLQKCKECVFCLHIVTALYSLNVEQCSITSRTVQ 1014

Query: 96   KMADALHEGSALSHLSLGNNNPISGNTMXXXXXXXXXXXRFSELSLTGIKLSKLMVDKLC 155
            KMADALHEGS LSHLSLGNNNPISGNTM           RFSELS     L+ + ++KL 
Sbjct: 1015 KMADALHEGSVLSHLSLGNNNPISGNTMLSLLSKLASLKRFSELS-----LTGIKLNKL- 1068

Query: 156  VLAQSSCLSGFLLGGTYIGSGGATKLTEALSCASQELLRLDLSNCGLTTPDFSQLCTNLS 215
             +A   CL                               L  S+C             LS
Sbjct: 1069 -MADKLCL-------------------------------LAQSSC-------------LS 1083

Query: 216  QINIVDLNLGGNSFTLEECDAIRALLSNPQCSLRSLTLDRCNLGLAGTVGIIQALAGNDQ 275
               +   N+G        C+AI  LLSNPQCSLRSLTLDRCNLGLAG VGIIQALAGND+
Sbjct: 1084 GFLLGGTNIGSG------CEAIGVLLSNPQCSLRSLTLDRCNLGLAGIVGIIQALAGNDR 1137

Query: 276  LEELRVAENTNLALQRTLQYDEDAQDVSPGTDQNQRTNAEANDHIDPDKMEVPDSEDEEA 335
            LEELR+AENTNLALQRTLQYDEDAQDVSPGTDQNQRTNAEAND IDPDKMEVPDSEDEEA
Sbjct: 1138 LEELRIAENTNLALQRTLQYDEDAQDVSPGTDQNQRTNAEANDRIDPDKMEVPDSEDEEA 1197

Query: 336  VHEDTRAATGPDGXXXXXXXXXXXXXXHAIQELADAIISAKQLKVLDLSRNGLSEEDIQS 395
            V+EDTRAATG DG              HAIQELADAIISAKQLKVLDLSRNGLSEEDIQS
Sbjct: 1198 VYEDTRAATGSDGSCASSCQRNSSSGCHAIQELADAIISAKQLKVLDLSRNGLSEEDIQS 1257

Query: 396  LYSAWASGPRGDGMARKHVAKEVVHFAVDGMNCCGLKPCCRRDLQM 441
            LYSAWASGPRGDGMAR+HVAKEVVHFAVDGMNCCGLKPCCRRDLQM
Sbjct: 1258 LYSAWASGPRGDGMARRHVAKEVVHFAVDGMNCCGLKPCCRRDLQM 1303



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.317    0.132    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,685,105
Number of extensions: 524828
Number of successful extensions: 1972
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1970
Number of HSP's successfully gapped: 3
Length of query: 441
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 337
Effective length of database: 11,605,545
Effective search space: 3911068665
Effective search space used: 3911068665
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)