BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0777100 Os02g0777100|AK067308
         (832 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0777100  uDENN domain containing protein                    1686   0.0  
Os03g0145500  uDENN domain containing protein                     350   2e-96

>Os02g0777100 uDENN domain containing protein
          Length = 832

 Score = 1686 bits (4366), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 821/832 (98%), Positives = 821/832 (98%)

Query: 1   MVDKNDGSEGLKFNTSHLMQTTEEVXXXXXXXXXXXTVQSTRPSVVYSSREESGSPMQKL 60
           MVDKNDGSEGLKFNTSHLMQTTEEV           TVQSTRPSVVYSSREESGSPMQKL
Sbjct: 1   MVDKNDGSEGLKFNTSHLMQTTEEVARAFIAAASAATVQSTRPSVVYSSREESGSPMQKL 60

Query: 61  QQQFSKILKGFSTSPEVSGSYNPEVLTTQKRQWSRFQLKSLGNRCIREPSHLFESIVIVG 120
           QQQFSKILKGFSTSPEVSGSYNPEVLTTQKRQWSRFQLKSLGNRCIREPSHLFESIVIVG
Sbjct: 61  QQQFSKILKGFSTSPEVSGSYNPEVLTTQKRQWSRFQLKSLGNRCIREPSHLFESIVIVG 120

Query: 121 LPPQADIHELENIALGSNEEDVKKPRNIFGNNHHQVHALSNLEPQVLFAYPPERPLPLKY 180
           LPPQADIHELENIALGSNEEDVKKPRNIFGNNHHQVHALSNLEPQVLFAYPPERPLPLKY
Sbjct: 121 LPPQADIHELENIALGSNEEDVKKPRNIFGNNHHQVHALSNLEPQVLFAYPPERPLPLKY 180

Query: 181 KDILSFCLPGGVQVHAVERTPSFSELNEILLGQEQLKESNQSFVFRLQVADDSTLYGCCV 240
           KDILSFCLPGGVQVHAVERTPSFSELNEILLGQEQLKESNQSFVFRLQVADDSTLYGCCV
Sbjct: 181 KDILSFCLPGGVQVHAVERTPSFSELNEILLGQEQLKESNQSFVFRLQVADDSTLYGCCV 240

Query: 241 LVEEIVQRPSKLVSMLTSEKPVFPRRSRYVITTPRCYCIFSRLPFFELHFGVLQSILMEE 300
           LVEEIVQRPSKLVSMLTSEKPVFPRRSRYVITTPRCYCIFSRLPFFELHFGVLQSILMEE
Sbjct: 241 LVEEIVQRPSKLVSMLTSEKPVFPRRSRYVITTPRCYCIFSRLPFFELHFGVLQSILMEE 300

Query: 301 RLEWLTDGVSLLTSLSPEETCEDDVVCEGTELATEKQYFDGHAVDLEKSSESSVGVCSKE 360
           RLEWLTDGVSLLTSLSPEETCEDDVVCEGTELATEKQYFDGHAVDLEKSSESSVGVCSKE
Sbjct: 301 RLEWLTDGVSLLTSLSPEETCEDDVVCEGTELATEKQYFDGHAVDLEKSSESSVGVCSKE 360

Query: 361 LSDTDSSSECRDNQLDLNCKEVQQECVVQDDLVTGTAPQCDTLERPDNCLSEDTTADQSG 420
           LSDTDSSSECRDNQLDLNCKEVQQECVVQDDLVTGTAPQCDTLERPDNCLSEDTTADQSG
Sbjct: 361 LSDTDSSSECRDNQLDLNCKEVQQECVVQDDLVTGTAPQCDTLERPDNCLSEDTTADQSG 420

Query: 421 IELHELDSVPVILKESDTTENCGYSLQDDVNDEQLDIFVNDTILPLMRSRLCEGSELSPG 480
           IELHELDSVPVILKESDTTENCGYSLQDDVNDEQLDIFVNDTILPLMRSRLCEGSELSPG
Sbjct: 421 IELHELDSVPVILKESDTTENCGYSLQDDVNDEQLDIFVNDTILPLMRSRLCEGSELSPG 480

Query: 481 SQDSPSEGINFRSDSHESDLEEPSSIGHGDLVGHNNISQWAKAKKYGSLQVVSQYYQLQC 540
           SQDSPSEGINFRSDSHESDLEEPSSIGHGDLVGHNNISQWAKAKKYGSLQVVSQYYQLQC
Sbjct: 481 SQDSPSEGINFRSDSHESDLEEPSSIGHGDLVGHNNISQWAKAKKYGSLQVVSQYYQLQC 540

Query: 541 PARGSSLTFHPLDHLHPLRFHRPGETVLHIAGSTIDLRSCDTSLEVAEMRNALFAEEEST 600
           PARGSSLTFHPLDHLHPLRFHRPGETVLHIAGSTIDLRSCDTSLEVAEMRNALFAEEEST
Sbjct: 541 PARGSSLTFHPLDHLHPLRFHRPGETVLHIAGSTIDLRSCDTSLEVAEMRNALFAEEEST 600

Query: 601 ALSTWAVASICGCLRLEHVMTLFAAALLEKQIIIVCSNLGMLSASVLSIIPLIRPYQWQS 660
           ALSTWAVASICGCLRLEHVMTLFAAALLEKQIIIVCSNLGMLSASVLSIIPLIRPYQWQS
Sbjct: 601 ALSTWAVASICGCLRLEHVMTLFAAALLEKQIIIVCSNLGMLSASVLSIIPLIRPYQWQS 660

Query: 661 LLIPVLPNDMMDFLDAPVPYIVGVQNKTSDVHSRLVNAVVIDANKNQIKSTSVPQLPQQK 720
           LLIPVLPNDMMDFLDAPVPYIVGVQNKTSDVHSRLVNAVVIDANKNQIKSTSVPQLPQQK
Sbjct: 661 LLIPVLPNDMMDFLDAPVPYIVGVQNKTSDVHSRLVNAVVIDANKNQIKSTSVPQLPQQK 720

Query: 721 ELLSALRPYHSRLVGESFLARKRPVYECTDAQVEAAKGFLAVLRSYLDSLCSNLRSHTIT 780
           ELLSALRPYHSRLVGESFLARKRPVYECTDAQVEAAKGFLAVLRSYLDSLCSNLRSHTIT
Sbjct: 721 ELLSALRPYHSRLVGESFLARKRPVYECTDAQVEAAKGFLAVLRSYLDSLCSNLRSHTIT 780

Query: 781 NVQSNNDKVSLLLRESFIGSFPTRERPFMKLFVDTQLFSVHTDLVLSFYQKD 832
           NVQSNNDKVSLLLRESFIGSFPTRERPFMKLFVDTQLFSVHTDLVLSFYQKD
Sbjct: 781 NVQSNNDKVSLLLRESFIGSFPTRERPFMKLFVDTQLFSVHTDLVLSFYQKD 832



>Os03g0145500 uDENN domain containing protein
          Length = 941

 Score =  350 bits (898), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 179/335 (53%), Positives = 244/335 (72%), Gaps = 2/335 (0%)

Query: 498 SDLEEPSSIGHGDLVGHNNISQWAKAKKYGSLQVVSQYYQLQCPARGSSLTFHPLDHLHP 557
           SD EE  ++    +V    +  WAK      LQ+V  Y+ L  P RG  L FHPL+HL P
Sbjct: 607 SDEEEELNMKQEIVVDDEKVMGWAKVHNNEPLQIVCGYHALALPPRGGELVFHPLEHLQP 666

Query: 558 LRFHRPGETVLHIAGSTIDLRSCDTSLEVAEMRNALFAEEESTALSTWAVASICGCLRLE 617
           +++ RPG ++L + G TI      TS+E  E+   L A EE+ ALS W  A+IC  L LE
Sbjct: 667 VKYSRPGLSLLGL-GDTISDNGL-TSVEKTEVNARLAAAEEAIALSIWTTATICRALSLE 724

Query: 618 HVMTLFAAALLEKQIIIVCSNLGMLSASVLSIIPLIRPYQWQSLLIPVLPNDMMDFLDAP 677
            V+ LFAAALLEKQI+++CSNLG+LSA VLS++P+IRP+QWQSLL+PVLP  ++DFLDAP
Sbjct: 725 SVLELFAAALLEKQIVVICSNLGVLSAIVLSVMPMIRPFQWQSLLLPVLPRKLVDFLDAP 784

Query: 678 VPYIVGVQNKTSDVHSRLVNAVVIDANKNQIKSTSVPQLPQQKELLSALRPYHSRLVGES 737
           VP+I GVQ+K  D+  +  + V I+ +K+Q+K+ S+PQLP+ KEL+S L P H+RL  E+
Sbjct: 785 VPFIAGVQHKPPDIKMKASSIVRINVDKDQVKACSLPQLPRFKELVSDLSPIHARLSCEN 844

Query: 738 FLARKRPVYECTDAQVEAAKGFLAVLRSYLDSLCSNLRSHTITNVQSNNDKVSLLLRESF 797
            LA++ P+Y+C + Q EAA  FL V+RSYL+SLCS+L SHTITNVQSNND+VSLLL++SF
Sbjct: 845 ALAKRHPIYKCNEVQAEAAWQFLNVMRSYLESLCSDLPSHTITNVQSNNDRVSLLLKDSF 904

Query: 798 IGSFPTRERPFMKLFVDTQLFSVHTDLVLSFYQKD 832
           I SFP+++RPF+KLFV+TQ+FSV +D  LS ++ +
Sbjct: 905 IDSFPSKDRPFVKLFVETQMFSVLSDSRLSTFENE 939




 Score =  187 bits (475), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 93/238 (39%), Positives = 145/238 (60%), Gaps = 2/238 (0%)

Query: 82  NPEVLTTQKRQWSRFQLKSLGNRCIREPSHLFESIVIVGLPPQADIHELEN-IALGSNEE 140
           N E +  QKRQW + Q KS  N+  +EP+ LFE   +VGL   A++  +E+  A     E
Sbjct: 217 NFEAMAHQKRQWYQIQSKSRDNKQYKEPTTLFEHFFVVGLHSYANVGVIEDAFAKKKAWE 276

Query: 141 DVKKPRNIFGNNHHQVHA-LSNLEPQVLFAYPPERPLPLKYKDILSFCLPGGVQVHAVER 199
              +   I      Q H  +  +EPQ+LF YPP +   ++  D+ SFC P GV+   +ER
Sbjct: 277 SNVEHSEIVDLRKIQYHGPIPTMEPQILFKYPPGKKAEIREIDLPSFCFPEGVKARLIER 336

Query: 200 TPSFSELNEILLGQEQLKESNQSFVFRLQVADDSTLYGCCVLVEEIVQRPSKLVSMLTSE 259
           TPS S+LNE++ GQE L   + SF+F ++V+D++ LYG C+ V+EIVQR   ++ M++  
Sbjct: 337 TPSMSDLNEVVFGQEHLCRDDLSFIFSMKVSDNAPLYGVCLHVQEIVQRAPGILGMVSPL 396

Query: 260 KPVFPRRSRYVITTPRCYCIFSRLPFFELHFGVLQSILMEERLEWLTDGVSLLTSLSP 317
            P   + SR++++ PRCYC+ +++PFFELH+ +L SI+ +ERL+ +T   S +    P
Sbjct: 397 NPTSYKPSRFLVSAPRCYCLLTKVPFFELHYEMLNSIIAQERLDRITQFASEIALAEP 454



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.317    0.133    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 27,979,766
Number of extensions: 1191103
Number of successful extensions: 2895
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2893
Number of HSP's successfully gapped: 3
Length of query: 832
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 723
Effective length of database: 11,344,475
Effective search space: 8202055425
Effective search space used: 8202055425
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 160 (66.2 bits)