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Os02g0777100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : uDENN domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.36 (0.0151) R2 : 0.683
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.21 (0.0397) R2dC : 0.651 R2C : 0.647
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.204 (0.0319) R2dN8 : 0.0368 R2N8 : 0.0321
σ : 0.286
deviance : 37.26
__
_____
C
peak time of C : 6.08
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.84 0.248 9.31 0.299 1.01 -0.773 0.252 1.41 0.381 6.64 18.6 165 -- --
29.58 0.253 9.34 0.0694 1.03 -0.683 -0.0239 -- 0.306 6.48 18 205 -- --
27.99 0.246 9.31 0.287 1.01 -0.772 -- 1.33 0.377 6.64 18.62 164 -- --
29.47 0.253 9.34 0.0639 1.02 -0.744 -- -- 0.312 6.61 17.44 164 -- --
61.03 0.364 9.27 0.523 -- -1.61 -- 2.55 0.534 -- 23.53 374 -- --
36.9 0.285 9.36 -0.112 1.21 -- 0.117 -- 0.192 6.08 -- -- -- --
36.94 0.285 9.36 -0.111 1.21 -- -- -- 0.192 6.08 -- -- -- --
63.55 0.371 9.35 0.15 -- -1.31 -- -- 0.355 -- 24.1 375 -- --
29.56 0.253 9.34 -- 1.02 -0.711 -- -- 0.3 6.59 17.9 164 -- --
113.38 0.498 9.38 -0.0761 -- -- -- -- 0.219 -- -- -- -- --
37.26 0.286 9.36 -- 1.21 -- -- -- 0.204 6.08 -- -- -- --
64.13 0.373 9.36 -- -- -1.29 -- -- 0.337 -- 24.1 375 -- --
113.54 0.497 9.38 -- -- -- -- -- 0.227 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.93 temperature 20 90 > th dose dependent rect. 19 23
2 27.08 temperature 10 270 > th dose dependent rect. 19 23
3 27.15 temperature 20 90 > th dose dependent rect. 21 21
7 27.41 temperature 20 90 > th dose dependent rect. 23 19
30 28.03 temperature 20 270 > th dose dependent rect. 17 23
31 28.06 temperature 10 270 > th dose dependent rect. 4 23
32 28.06 temperature 20 30 > th dose dependent rect. 6 23
37 28.14 temperature 20 30 > th dose dependent rect. 8 23
47 28.25 temperature 20 90 > th dose dependent no NA NA
67 28.44 temperature 30 30 < th dose dependent rect. 3 23
71 28.46 temperature 20 90 > th dose dependent rect. 23 23
78 28.50 temperature 20 90 > th dose dependent rect. 11 23
140 28.90 temperature 20 270 > th dose dependent rect. 13 23
160 29.00 temperature 30 90 < th dose dependent rect. 11 23
165 29.04 temperature 20 270 > th dose dependent sin 9 NA
176 29.07 temperature 30 270 < th dose dependent rect. 13 22
202 29.18 temperature 30 90 < th dose dependent rect. 15 23
203 29.19 humidity 80 43200 > th dose independent rect. 21 1
218 29.23 temperature 30 30 < th dose dependent rect. 9 23
225 29.27 temperature 30 10 < th dose dependent rect. 1 23
231 29.29 temperature 30 270 < th dose dependent rect. 24 23
238 29.34 temperature 30 10 < th dose dependent rect. 13 23
241 29.36 humidity 80 43200 < th dose independent rect. 20 2
242 29.36 temperature 30 90 < th dose dependent rect. 17 18
253 29.39 temperature 30 90 < th dose dependent no NA NA
258 29.40 temperature 30 10 < th dose dependent rect. 16 23
262 29.42 radiation 1 43200 < th dose dependent rect. 4 1
271 29.43 humidity 80 43200 > th dose independent rect. 20 3
272 29.43 temperature 20 270 > th dose dependent rect. 21 12
274 29.43 temperature 30 270 < th dose dependent rect. 22 23
289 29.48 temperature 30 30 < th dose dependent rect. 7 23
303 29.52 temperature 30 10 < th dose dependent no NA NA
306 29.52 temperature 30 10 < th dose dependent rect. 16 20
337 29.60 radiation 1 43200 < th dose dependent rect. 19 10
365 29.65 wind 5 43200 > th dose independent rect. 14 2
376 29.67 temperature 20 10 > th dose dependent rect. 11 23
377 29.67 temperature 20 10 > th dose dependent rect. 17 23
378 29.68 wind 5 43200 < th dose independent rect. 15 1
381 29.68 radiation 1 43200 < th dose independent rect. 18 11
403 29.72 radiation 1 14400 > th dose independent rect. 18 1
420 29.73 radiation 10 4320 < th dose independent rect. 18 6
436 29.76 atmosphere 1005 43200 < th dose independent rect. 1 1
437 29.76 atmosphere 1005 43200 < th dose independent rect. 16 10
445 29.77 atmosphere 1005 43200 < th dose independent rect. 16 8
451 29.77 temperature 30 270 < th dose dependent sin 8 NA
457 29.78 atmosphere 1005 43200 > th dose independent rect. 15 11
475 29.79 atmosphere 1005 43200 < th dose independent rect. 10 16
477 29.80 atmosphere 1005 43200 < th dose independent sin 14 NA
480 29.80 radiation 1 43200 < th dose independent rect. 18 4
481 29.80 radiation 1 43200 < th dose independent rect. 18 6
501 29.81 atmosphere 1005 43200 > th dose independent rect. 1 1
504 29.81 atmosphere 1005 43200 < th dose independent rect. 18 4
531 29.81 wind 1 43200 > th dose dependent rect. 14 1
536 29.82 radiation 20 43200 > th dose independent rect. 9 1
554 29.82 atmosphere 1005 43200 > th dose independent rect. 10 16
568 29.82 wind 9 43200 < th dose dependent rect. 14 1
573 29.83 atmosphere 1005 43200 > th dose independent sin 15 NA
577 29.83 atmosphere 1005 43200 > th dose independent rect. 16 1
673 29.85 radiation 30 43200 < th dose independent rect. 9 1
706 29.85 atmosphere 1005 43200 > th dose independent rect. 15 20
728 29.85 temperature 20 720 > th dose dependent rect. 15 18
733 29.86 atmosphere 1005 43200 < th dose independent no NA NA
734 29.86 atmosphere 1005 43200 > th dose independent rect. 19 1
737 29.86 atmosphere 1005 43200 > th dose independent rect. 18 4
780 29.86 atmosphere 1005 43200 < th dose independent rect. 1 23
787 29.86 atmosphere 1005 43200 < th dose independent rect. 20 23
789 29.86 humidity 70 43200 < th dose dependent rect. 10 2
798 29.87 atmosphere 1005 43200 > th dose independent no NA NA
855 29.87 atmosphere 1005 43200 < th dose independent rect. 18 23
879 29.88 atmosphere 1005 43200 > th dose independent rect. 10 7
911 29.88 atmosphere 1005 43200 > th dose independent rect. 1 22
915 29.88 atmosphere 1005 43200 > th dose independent rect. 20 22
926 29.88 atmosphere 1005 43200 > th dose independent rect. 18 23
934 29.88 humidity 80 43200 < th dose dependent rect. 20 1
939 29.89 atmosphere 1005 43200 < th dose independent rect. 11 1
940 29.89 radiation 40 43200 > th dose independent rect. 10 2
944 29.89 atmosphere 1005 43200 < th dose independent rect. 22 6
963 29.89 atmosphere 1005 43200 > th dose independent rect. 23 19
966 29.89 atmosphere 1005 43200 > th dose independent rect. 21 20