BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0777100 Os02g0777100|AK067308
(832 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G35560.1 | chr5:13742458-13747464 REVERSE LENGTH=766 795 0.0
AT2G20320.1 | chr2:8767082-8772271 FORWARD LENGTH=1030 506 e-143
AT1G49040.1 | chr1:18139419-18148826 REVERSE LENGTH=1188 73 6e-13
>AT5G35560.1 | chr5:13742458-13747464 REVERSE LENGTH=766
Length = 765
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/846 (51%), Positives = 554/846 (65%), Gaps = 97/846 (11%)
Query: 1 MVDKNDGSEGLKFNTSHLMQTTEEVXXXXXXXXXXXTVQSTRPSVVYSSREE-SGSPMQK 59
M +GS + S MQT+E+V + RPSVV+SS++E S SP+++
Sbjct: 1 MAKNEEGSSSPSWGASFFMQTSEDVAMAFAAAAS--AINPPRPSVVFSSKDEGSDSPLER 58
Query: 60 LQQQFSKILKGFSTSPEV-SGSYNPEVLTTQKRQWSRFQLKSLGNRCIREPSHLFESIVI 118
LQ+Q SK +K F +P+ S YNPEVLT+QKRQW++FQ ++ +++PS LFES+V+
Sbjct: 59 LQRQVSKAVKNFYETPKTKSVLYNPEVLTSQKRQWAKFQ----DHKPLKDPSRLFESVVV 114
Query: 119 VGLPPQADIHELEN--IALGSNEEDVKKPRNIFGNNHHQVHALSNLEPQVLFAYPPERPL 176
VGL P DI LE IA S + + NH +V +LEPQVL YPP++
Sbjct: 115 VGLHPNCDIQALERQYIARKSEGSSGRLRSALVSQNHSRVEP--SLEPQVLLVYPPDKQP 172
Query: 177 PLKYKDILSFCLPGGVQVHAVERTPSFSELNEILLGQEQLKESNQSFVFRLQVADDSTLY 236
P+KYKD+ SFC PGG++VHAVERTPS SEL+EI+L QE L+ S+ SFVFRLQVAD+STLY
Sbjct: 173 PIKYKDLHSFCFPGGIEVHAVERTPSMSELSEIILSQEHLRPSDLSFVFRLQVADNSTLY 232
Query: 237 GCCVLVEEIVQRPSKLVSMLTSEKPVFPRRSRYVITTPRCYCIFSRLPFFELHFGVLQSI 296
GCC+LVEEIV +PS+L+S + ++P SRYV+TT RCYC+ +RLPFFELHFGVL SI
Sbjct: 233 GCCLLVEEIVNKPSRLLSTVLDKQPACSSLSRYVMTTRRCYCVLTRLPFFELHFGVLNSI 292
Query: 297 LMEERLEWLTDGVSLLTSLSPEETCEDDVVCEGTELATEKQYFDGHAVDLEKSSESSVGV 356
+EERLE L G+S C E T+
Sbjct: 293 FLEERLEHLMSGIS----------------CASLEPPTD--------------------- 315
Query: 357 CSKELSDTDSSSECRDNQLDLNCKEVQQECVVQDDLVTGTAPQCDTLERPDNCLSEDTTA 416
S E S DSS + RD+ + KE E P+ D + C + A
Sbjct: 316 FSNEDSLNDSSPQQRDSG---DTKEQTVE-------AGSKLPKADEISDNGTC-EANQKA 364
Query: 417 DQSGIELHEL----DSVPVI-------LKESDTTENCGYSLQDDVNDEQLDIFVNDTILP 465
D S + + DS+P+I L E C Y D+++D
Sbjct: 365 DDSAESIDRVTKADDSLPIIKQGRESCLPEPGPLLRCPY--LDEISDSSTS--------- 413
Query: 466 LMRSRLCEGSELSPGSQDSPSEGINFRSDSHESDLEEPSSIGHGDLVGHNNISQWAKAKK 525
++ CE + D+ ++ +F G D + +I +WAK+KK
Sbjct: 414 -FQAAPCERRHSRTSADDTETDEASFS--------------GQDDTSSNFDILEWAKSKK 458
Query: 526 YGSLQVVSQYYQLQCPARGSSLTFHPLDHLHPLRFHRPGETVLHIAGSTIDLRSCDTSLE 585
GSLQ++ +YYQL+CPARGS++TFHPL+HLHP+ +HRP E LH GS IDLRSC TSLE
Sbjct: 459 NGSLQILCEYYQLKCPARGSTITFHPLEHLHPVEYHRPNEVALHTPGSAIDLRSCSTSLE 518
Query: 586 VAEMRNALFAEEESTALSTWAVASICGCLRLEHVMTLFAAALLEKQIIIVCSNLGMLSAS 645
+AE L AEEE+ ALSTWAVAS+CG LRL++V+ + A ALLEKQI+ VCSNLG+L+AS
Sbjct: 519 LAEAHTTLMAEEEAAALSTWAVASLCGSLRLDNVLMILAGALLEKQIVFVCSNLGILAAS 578
Query: 646 VLSIIPLIRPYQWQSLLIPVLPNDMMDFLDAPVPYIVGVQNKTSDVHSRLVNAVVIDANK 705
VLSIIP+IRP++WQSLL+PVLP+DM++FLDAPVPYIVGV+NKTS+V S+L N +V+D K
Sbjct: 579 VLSIIPVIRPFRWQSLLMPVLPDDMLEFLDAPVPYIVGVKNKTSEVQSKLTNVIVVDILK 638
Query: 706 NQIKSTSVPQLPQQKELLSALRPYHSRLVGESFLARKRPVYECTDAQVEAAKGFLAVLRS 765
NQ+KS S+PQLPQ ++L +AL PYHS+LVGES+LA+KRPVYECTD QV+AAKGF+ VLRS
Sbjct: 639 NQVKSPSMPQLPQYRDLYNALSPYHSKLVGESYLAKKRPVYECTDVQVDAAKGFMDVLRS 698
Query: 766 YLDSLCSNLRSHTITNVQSNNDKVSLLLRESFIGSFPTRERPFMKLFVDTQLFSVHTDLV 825
YLDSLCSNL+SHTITNVQSNNDKVSLLL+ESFI SFP+R+RPFMKLFVDTQLFSVHTDLV
Sbjct: 699 YLDSLCSNLQSHTITNVQSNNDKVSLLLKESFIDSFPSRQRPFMKLFVDTQLFSVHTDLV 758
Query: 826 LSFYQK 831
LSF QK
Sbjct: 759 LSFIQK 764
>AT2G20320.1 | chr2:8767082-8772271 FORWARD LENGTH=1030
Length = 1029
Score = 506 bits (1304), Expect = e-143, Method: Compositional matrix adjust.
Identities = 305/794 (38%), Positives = 451/794 (56%), Gaps = 75/794 (9%)
Query: 57 MQKLQQQFSKILKGFSTSPEVSG-SYNPEVLTTQKRQWSRFQL---KSLGNRCIREPSHL 112
Q+L+ Q K +G S E + ++NPEVL QKRQW +QL K+L ++EP+ L
Sbjct: 287 FQRLKTQMQKAWRGVSNLREDNRPTFNPEVLANQKRQW--YQLHSSKALDQTKLKEPASL 344
Query: 113 FESIVIVGLPPQADIHELENIALGSNEEDVKKPRNIFGNNH---HQVHALSNLEPQVLFA 169
FE +IVGL P+ ++ +E + +++ R + H+ LEPQ+LF
Sbjct: 345 FEHFIIVGLHPETNLRPVEEAFRRRKKWEMEMSRYEVADYRILRHRGPQFPILEPQILFK 404
Query: 170 YPPERPLPLKYKDILSFCLPGGVQVHAVERTPSFSELNEILLGQEQLKESNQSFVFRLQV 229
YPP + + ++ KD+ +FC PGGV+ +ERTPS S+LNE++ GQE L + SF+F +V
Sbjct: 405 YPPGKKVAMRPKDLATFCFPGGVKARLLERTPSLSDLNELVYGQEHLGTDDSSFIFSFKV 464
Query: 230 ADDSTLYGCCVLVEEIVQRPSKLVSMLTSEKPVFPRR--SRYVITTPRCYCIFSRLPFFE 287
ADD+TLYG C+ V EIVQRP +L++ P+ SR++++ PRCYC+ +R+PFFE
Sbjct: 465 ADDATLYGVCLHVSEIVQRPP---GVLSTASPLHSSGGGSRFLVSAPRCYCLLTRVPFFE 521
Query: 288 LHFGVLQSILMEERLEWLTDGVSLLTSLSPEETCEDDVVCEGTELATEKQYFDGHAVDLE 347
LHF +L S++ +ERL+ +T+ VS + SL+ C ++ D
Sbjct: 522 LHFEMLNSMIAQERLKRITEFVSEM-SLA--------AACYLPSISRRNDQID------- 565
Query: 348 KSSESSVGVCSKELSDTDSSSECRDNQLDLNCKEVQQECVVQDDLVTGTAPQCDTLERPD 407
S V D +S+ D + L + D+ PQ PD
Sbjct: 566 ----SRVSSPRSNPDDWMASAIPVDGVMALTAAAAG--LITDSDIANFAEPQS-----PD 614
Query: 408 NCLSEDTTADQSGIELHELDSVPVILKESDTTENCGYSLQDDVNDEQLDIFVNDTILPLM 467
+ ++ DT+ D S I+ E D V +C ++ ++F N P
Sbjct: 615 SVVTSDTS-DVSQIKEIERDGRKVF--------HC-------YDENSPEVFENHLDTPER 658
Query: 468 RSRLCEGSELSP--GSQDSPSEGINFRSDSHESDLEEPSSIGHGDL---------VGHNN 516
S+ + SP D ++ I R++S ES S+ D+ G +
Sbjct: 659 TSQSYDNGHTSPEVTCSDPRTQPIE-RNESCESVFSSARSVLSDDVDELSNSENDFGDDL 717
Query: 517 ISQWAKAKKYGSLQVVSQYYQLQCPARGSSLTFHPLDHLHPLRFHRPGETVLHIAGSTID 576
I +WAK SLQ+V Y+ L P+RGS + FHPL+HL + + RP + L ++ I
Sbjct: 718 ILEWAKDHNNDSLQLVCGYHSLAIPSRGSEVVFHPLEHLQSISYTRPPVSALGLSEEYI- 776
Query: 577 LRSCDTSLEVAEMRNALFAEEESTALSTWAVASICGCLRLEHVMTLFAAALLEKQIIIVC 636
S + E+ L A EE+ LS W A++C L LE +M+L A LLEKQI+I+C
Sbjct: 777 -----CSSDSKEINARLAAAEEAMGLSMWTTATVCRILSLETIMSLLAGVLLEKQIVIIC 831
Query: 637 SNLGMLSASVLSIIPLIRPYQWQSLLIPVLPNDMMDFLDAPVPYIVGVQNKTSDVHSRLV 696
NLG+LSA VLS++P+IRP+QWQSLL+PVLP M DFL+APVP++VG+ +K D +
Sbjct: 832 PNLGVLSAIVLSLVPMIRPFQWQSLLLPVLPGRMFDFLEAPVPFLVGIHSKPIDWKVKTS 891
Query: 697 NAVVIDANKNQIKSTSVPQLPQQKELLSALRPYHSRLVGESFLARKRPVYECTDAQVEAA 756
N ++++ NQ+K ++P LPQ +EL++ L P H+ L +S AR+ PVY+C + Q EAA
Sbjct: 892 NLILVNILNNQVKICNMPALPQCRELMAQLAPIHATLAHQSSNARRHPVYKCNEVQAEAA 951
Query: 757 KGFLAVLRSYLDSLCSNLRSHTITNVQSNNDKVSLLLRESFIGSFPTRERPFMKLFVDTQ 816
FL V+R Y++SLCS+L SHTIT+VQSN+D+VSLLL++SFI SFP R+RPF+KLFVDTQ
Sbjct: 952 TKFLRVMRDYMESLCSDLHSHTITSVQSNSDRVSLLLKDSFIDSFPGRDRPFIKLFVDTQ 1011
Query: 817 LFSVHTDLVLSFYQ 830
LFSV +D LS ++
Sbjct: 1012 LFSVLSDSRLSSFE 1025
>AT1G49040.1 | chr1:18139419-18148826 REVERSE LENGTH=1188
Length = 1187
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 73/123 (59%), Gaps = 7/123 (5%)
Query: 613 CLRLEHVMTLFAAALLEKQIIIVCSNLGMLSASVLSIIPLIRPYQWQSLLIPVLPNDMMD 672
CL +++++ LF + L+E++I+I + +L+ SI LI P++W + IP+L +D
Sbjct: 213 CLDVDNLIKLFTSVLVERRILIRSNKYSLLTLVSESICHLIYPFRWLQVYIPLLFFSGVD 272
Query: 673 FLDAPVPYIVGVQNKTSDVHSRLVNAVVIDANKNQIKST-SVPQLPQ------QKELLSA 725
++DAP PY++G+ + + + VV+D + NQI ++ +PQ+P+ + ++L
Sbjct: 273 YIDAPTPYMMGLHSDVDTSNLAMDGVVVVDLDINQITTSEEIPQIPEPEFSTLRNDILKL 332
Query: 726 LRP 728
L P
Sbjct: 333 LHP 335
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.133 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 18,357,573
Number of extensions: 801126
Number of successful extensions: 2036
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 2027
Number of HSP's successfully gapped: 5
Length of query: 832
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 725
Effective length of database: 8,173,057
Effective search space: 5925466325
Effective search space used: 5925466325
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 116 (49.3 bits)