BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0745000 Os02g0745000|AK099676
(264 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0745000 Anion-transporting ATPase family protein 478 e-135
Os09g0521500 Similar to Arsenical pump-driving ATPase (EC 3... 100 2e-21
AK105872 100 2e-21
>Os02g0745000 Anion-transporting ATPase family protein
Length = 264
Score = 478 bits (1231), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/264 (90%), Positives = 238/264 (90%)
Query: 1 PEAPLFALEINPEKAREEFRAASQKNGGTGVKDFMDGMGLGVXXXXXXXXXXXXXXDTPP 60
PEAPLFALEINPEKAREEFRAASQKNGGTGVKDFMDGMGLGV DTPP
Sbjct: 1 PEAPLFALEINPEKAREEFRAASQKNGGTGVKDFMDGMGLGVLAEQLGELKLGELLDTPP 60
Query: 61 PGLDEAIAISKVMQFLEAQEYSMFRRIVFDTAPTGHTLRLLSLPDFLDASIGKILKLRXX 120
PGLDEAIAISKVMQFLEAQEYSMFRRIVFDTAPTGHTLRLLSLPDFLDASIGKILKLR
Sbjct: 61 PGLDEAIAISKVMQFLEAQEYSMFRRIVFDTAPTGHTLRLLSLPDFLDASIGKILKLRSK 120
Query: 121 XXXXXXXXXXVFGQEVQQQDAANKLEQLRERMVQVRELFRDTESTEFIIVTIPTVMAISE 180
VFGQEVQQQDAANKLEQLRERMVQVRELFRDTESTEFIIVTIPTVMAISE
Sbjct: 121 IASATSAIKSVFGQEVQQQDAANKLEQLRERMVQVRELFRDTESTEFIIVTIPTVMAISE 180
Query: 181 SARLHSSLRNESVPVKRLIVNQILPPSSSDCKFCAIKRKDQTRALDMIRNDPELMGLNLI 240
SARLHSSLRNESVPVKRLIVNQILPPSSSDCKFCAIKRKDQTRALDMIRNDPELMGLNLI
Sbjct: 181 SARLHSSLRNESVPVKRLIVNQILPPSSSDCKFCAIKRKDQTRALDMIRNDPELMGLNLI 240
Query: 241 QAPLVDMEIRGVPALKFLGDIVWK 264
QAPLVDMEIRGVPALKFLGDIVWK
Sbjct: 241 QAPLVDMEIRGVPALKFLGDIVWK 264
>Os09g0521500 Similar to Arsenical pump-driving ATPase (EC 3.6.3.16)
(Arsenite-translocating ATPase) (Arsenical resistance
ATPase) (Arsenite-transporting ATPase) (ARSA) (ASNA-I)
Length = 361
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 129/258 (50%), Gaps = 39/258 (15%)
Query: 5 LFALEINPEKAREEFRAASQKNGGTGVKDFMDGMGLGVXXXXXXXXXXXXXXDTPPPGLD 64
L+A+EI+P+ ++F G++ F+ + + PG+D
Sbjct: 87 LYAMEIDPKVENDDF-------ANEGMEGFLSELTNAI------------------PGVD 121
Query: 65 EAIAISKVMQFLEAQEYSMFRRIVFDTAPTGHTLRLLSLPDFLDASIGKILKLRXXXXXX 124
EA++ +++++ ++ +YS+ +VFDTAPTGHTLRLL P L+ + K++ L+
Sbjct: 122 EAMSFAEMLKLVQTMDYSV---VVFDTAPTGHTLRLLQFPATLEKGLEKMMALKNKFGGL 178
Query: 125 XXXXXXVFG--QEVQQQDAANKLEQLRERMVQVRELFRDTESTEFIIVTIPTVMAISESA 182
+FG E+ + +LE +++ + QV F+D + T F+ V IP +++ E+
Sbjct: 179 LNQATRLFGLGDELNEDAMLGRLEGMKDVIEQVNRQFKDPDLTTFVCVCIPEFLSLYETE 238
Query: 183 RLHSSLRNESVPVKRLIVNQIL-PPSSSDCKFCAIKRKDQTRALD---MIRNDPELMGLN 238
RL L + +I+NQ+L + + K + K Q + +D M+ +D N
Sbjct: 239 RLVQELAKFEIDAHNIIINQVLFDEEAVESKLLKARIKMQQKYIDQFHMLYDD-----FN 293
Query: 239 LIQAPLVDMEIRGVPALK 256
+ + PL+ E+ GV AL+
Sbjct: 294 ITKLPLLPEEVCGVQALQ 311
>AK105872
Length = 361
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 129/258 (50%), Gaps = 39/258 (15%)
Query: 5 LFALEINPEKAREEFRAASQKNGGTGVKDFMDGMGLGVXXXXXXXXXXXXXXDTPPPGLD 64
L+A+EI+P+ ++F G++ F+ + + PG+D
Sbjct: 87 LYAMEIDPKVENDDF-------ANEGMEGFLSELTNAI------------------PGVD 121
Query: 65 EAIAISKVMQFLEAQEYSMFRRIVFDTAPTGHTLRLLSLPDFLDASIGKILKLRXXXXXX 124
EA++ +++++ ++ +YS+ +VFDTAPTGHTLRLL P L+ + K++ L+
Sbjct: 122 EAMSFAEMLKLVQTMDYSV---VVFDTAPTGHTLRLLQFPATLEKGLEKMMALKNKFGGL 178
Query: 125 XXXXXXVFG--QEVQQQDAANKLEQLRERMVQVRELFRDTESTEFIIVTIPTVMAISESA 182
+FG E+ + +LE +++ + QV F+D + T F+ V IP +++ E+
Sbjct: 179 LNQATRLFGLGDELNEDAMLGRLEGMKDVIEQVNRQFKDPDLTTFVCVCIPEFLSLYETE 238
Query: 183 RLHSSLRNESVPVKRLIVNQIL-PPSSSDCKFCAIKRKDQTRALD---MIRNDPELMGLN 238
RL L + +I+NQ+L + + K + K Q + +D M+ +D N
Sbjct: 239 RLVQELAKFEIDAHNIIINQVLFDEEAVESKLLKARIKMQQKYIDQFHMLYDD-----FN 293
Query: 239 LIQAPLVDMEIRGVPALK 256
+ + PL+ E+ GV AL+
Sbjct: 294 ITKLPLLPEEVCGVQALQ 311
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.137 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,782,964
Number of extensions: 269043
Number of successful extensions: 617
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 613
Number of HSP's successfully gapped: 3
Length of query: 264
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 165
Effective length of database: 11,866,615
Effective search space: 1957991475
Effective search space used: 1957991475
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 155 (64.3 bits)