Os02g0745000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Anion-transporting ATPase family protein.
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Os02g0745000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Anion-transporting ATPase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.37 | 0.323 | 11.9 | -0.695 | 0.262 | 1.29 | -0.7 | -0.927 | -0.456 | 2.06 | 25.52 | 106 | -- | -- |
| 47.51 | 0.321 | 11.9 | -0.603 | 0.269 | 1.2 | -0.61 | -- | -0.466 | 2.25 | 24.79 | 122 | -- | -- |
| 48.9 | 0.326 | 11.9 | -0.611 | 0.28 | 1.26 | -- | -0.164 | -0.446 | 1.89 | 25.32 | 115 | -- | -- |
| 48.84 | 0.326 | 11.9 | -0.581 | 0.277 | 1.24 | -- | -- | -0.454 | 2.15 | 25 | 121 | -- | -- |
| 51.63 | 0.335 | 11.9 | -0.489 | -- | 0.99 | -- | 0.421 | -0.391 | -- | 25.65 | 161 | -- | -- |
| 70.4 | 0.393 | 11.9 | -0.388 | 0.274 | -- | 1.12 | -- | -0.363 | 16.6 | -- | -- | -- | -- |
| 73.4 | 0.401 | 11.9 | -0.382 | 0.297 | -- | -- | -- | -0.357 | 17.6 | -- | -- | -- | -- |
| 51.68 | 0.335 | 11.9 | -0.533 | -- | 1.03 | -- | -- | -0.401 | -- | 25.7 | 161 | -- | -- |
| 57.29 | 0.353 | 11.9 | -- | 0.197 | 1.1 | -- | -- | -0.353 | 1.32 | 25.6 | 115 | -- | -- |
| 77.98 | 0.413 | 11.9 | -0.391 | -- | -- | -- | -- | -0.365 | -- | -- | -- | -- | -- |
| 77.24 | 0.411 | 11.9 | -- | 0.303 | -- | -- | -- | -0.315 | 17.5 | -- | -- | -- | -- |
| 59.04 | 0.358 | 11.9 | -- | -- | 0.957 | -- | -- | -0.336 | -- | 25.83 | 161 | -- | -- |
| 82.02 | 0.423 | 11.9 | -- | -- | -- | -- | -- | -0.321 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.89 | temperature | 20 | 720 | > th | dose dependent | sin | 5 | NA |
| 2 | 44.01 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 15 |
| 4 | 44.12 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 13 |
| 6 | 44.20 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 11 | 44.34 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 7 |
| 41 | 45.16 | temperature | 20 | 270 | > th | dose dependent | sin | 1 | NA |
| 100 | 46.27 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 103 | 46.30 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 10 |
| 109 | 46.39 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 13 |
| 115 | 46.48 | temperature | 20 | 270 | > th | dose dependent | rect. | 4 | 14 |
| 140 | 46.68 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 6 |
| 165 | 46.92 | temperature | 25 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 180 | 47.13 | temperature | 25 | 90 | > th | dose dependent | rect. | 7 | 15 |
| 182 | 47.14 | temperature | 25 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 188 | 47.21 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 4 |
| 189 | 47.21 | temperature | 25 | 90 | > th | dose dependent | rect. | 1 | 21 |
| 218 | 47.39 | temperature | 25 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 274 | 47.66 | temperature | 25 | 90 | > th | dose dependent | no | NA | NA |
| 277 | 47.67 | temperature | 30 | 270 | < th | dose dependent | sin | 0 | NA |
| 781 | 49.23 | temperature | 10 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 802 | 49.33 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 12 |
| 862 | 49.56 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 1 |
| 989 | 49.96 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 5 |