BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0714300 Os02g0714300|AK107036
         (486 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0714300  AT-rich interaction region domain containing p...   715   0.0  
Os06g0622300  AT-rich interaction region domain containing p...   408   e-114

>Os02g0714300 AT-rich interaction region domain containing protein
          Length = 486

 Score =  715 bits (1846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/486 (74%), Positives = 364/486 (74%)

Query: 1   MNGATAGSGSGSDHDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWXXXXXX 60
           MNGATAGSGSGSDHDD                                     W      
Sbjct: 1   MNGATAGSGSGSDHDDARAAEEARGEEAAGRAVEVEEEEEEEEAVPVAEERAAWGGGGTP 60

Query: 61  XXXXXKSDADAEGAGSLDRVELNXXXXXXXXXXXXXXXXXXXXXXXXXMNGEDAMSXXXX 120
                KSDADAEGAGSLDRVELN                         MNGEDAMS    
Sbjct: 61  PTPEPKSDADAEGAGSLDRVELNAGAGGGREREDDEGEDEAVGARGVEMNGEDAMSHDGH 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPDASPRAEAKAEGESSTVMAGCANQPA 180
                                          STPDASPRAEAKAEGESSTVMAGCANQPA
Sbjct: 121 DGDEDGDDEEDGDDGEEEEEEDDDEEDDDDDSTPDASPRAEAKAEGESSTVMAGCANQPA 180

Query: 181 EPDPFLDGDDSGTEEEQAAFMVELERFHREHGLEFKPPKFYGKGLNCLKLWRQVAHLGGH 240
           EPDPFLDGDDSGTEEEQAAFMVELERFHREHGLEFKPPKFYGKGLNCLKLWRQVAHLGGH
Sbjct: 181 EPDPFLDGDDSGTEEEQAAFMVELERFHREHGLEFKPPKFYGKGLNCLKLWRQVAHLGGH 240

Query: 241 EQVTICKLWRQVGETFRPPKTCTTVSWSFRIFYEKALLEYEKYKVRTGQLQVPLSALPQP 300
           EQVTICKLWRQVGETFRPPKTCTTVSWSFRIFYEKALLEYEKYKVRTGQLQVPLSALPQP
Sbjct: 241 EQVTICKLWRQVGETFRPPKTCTTVSWSFRIFYEKALLEYEKYKVRTGQLQVPLSALPQP 300

Query: 301 GGTGREIGMNQXXXXXXXXXXXXXXMQGWHAHRLLTNGIYGDQMLKEKDSVPSSSRGVLK 360
           GGTGREIGMNQ              MQGWHAHRLLTNGIYGDQMLKEKDSVPSSSRGVLK
Sbjct: 301 GGTGREIGMNQSSSARVRRDSAARAMQGWHAHRLLTNGIYGDQMLKEKDSVPSSSRGVLK 360

Query: 361 RKKASSPECAIKVSRTKINKSQDDSMVTDVGEPAEWVKINVRQTKDCFEIYALVPGLLRE 420
           RKKASSPECAIKVSRTKINKSQDDSMVTDVGEPAEWVKINVRQTKDCFEIYALVPGLLRE
Sbjct: 361 RKKASSPECAIKVSRTKINKSQDDSMVTDVGEPAEWVKINVRQTKDCFEIYALVPGLLRE 420

Query: 421 EVHVQSDPAGRLVITGDPEQPDNPWGITPFKKVVNLPLRIDPHQTSAVVTLHGQLFVRAP 480
           EVHVQSDPAGRLVITGDPEQPDNPWGITPFKKVVNLPLRIDPHQTSAVVTLHGQLFVRAP
Sbjct: 421 EVHVQSDPAGRLVITGDPEQPDNPWGITPFKKVVNLPLRIDPHQTSAVVTLHGQLFVRAP 480

Query: 481 FGHADM 486
           FGHADM
Sbjct: 481 FGHADM 486



>Os06g0622300 AT-rich interaction region domain containing protein
          Length = 461

 Score =  408 bits (1049), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 196/302 (64%), Positives = 234/302 (77%), Gaps = 10/302 (3%)

Query: 188 GDDSGTEEEQAAFMVELERFHREHGLEFKPPKFYGKGLNCLKLWRQVAHLGGHEQVTICK 247
           GDDSGTEEEQAAFM ELERF+RE  +EFKPPKFYG+GLNCLKLWRQV  LGG++QVT CK
Sbjct: 158 GDDSGTEEEQAAFMKELERFYREKLMEFKPPKFYGEGLNCLKLWRQVTGLGGYDQVTSCK 217

Query: 248 LWRQVGETFRPPKTCTTVSWSFRIFYEKALLEYEKYKVRTGQLQVPLSALPQPGGTGREI 307
           LWRQVGE+F+PPKTCTTVSW+FR FYEKALLEYEK+K+ TG+ QV  S L +   +  ++
Sbjct: 218 LWRQVGESFKPPKTCTTVSWTFRNFYEKALLEYEKHKIETGEFQVAASNLTERITSESQV 277

Query: 308 GMNQXXXXXXXXXXXXXXMQGWHAHRLLTNGIYGDQMLKE--------KDSVPSSSRGVL 359
           G++               MQGWH+ RLL NG   D ++K+        KD  P SS G  
Sbjct: 278 GIHASGSGRARRESATRAMQGWHSQRLLGNGEIADPIIKDKGTVSVLKKDKTPKSS-GSA 336

Query: 360 KRKKASSPECAIKVSRTKINKSQDDSMVTDVGEPAEWVKINVRQTKDCFEIYALVPGLLR 419
           KRK+  + E   ++   K +K Q+DSMV D+G PA+WVKINVR+TKDC+E+YALVPGLLR
Sbjct: 337 KRKRTPTLEDD-RIVPYKPDKLQNDSMVLDLGPPADWVKINVRRTKDCYEVYALVPGLLR 395

Query: 420 EEVHVQSDPAGRLVITGDPEQPDNPWGITPFKKVVNLPLRIDPHQTSAVVTLHGQLFVRA 479
           EEVHVQSDPAGRL++TG+PEQ DNPWG+TPFKKV++LP RIDPHQTSAVVTLHGQLFVRA
Sbjct: 396 EEVHVQSDPAGRLIVTGEPEQLDNPWGVTPFKKVISLPSRIDPHQTSAVVTLHGQLFVRA 455

Query: 480 PF 481
           PF
Sbjct: 456 PF 457



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.315    0.133    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,613,074
Number of extensions: 575159
Number of successful extensions: 1062
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1059
Number of HSP's successfully gapped: 2
Length of query: 486
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 381
Effective length of database: 11,553,331
Effective search space: 4401819111
Effective search space used: 4401819111
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 158 (65.5 bits)