Os06g0622300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : AT-rich interaction region domain containing protein.
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Os06g0622300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : AT-rich interaction region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.94 | 0.188 | 12.1 | 1 | 0.0683 | 0.482 | 0.348 | 0.137 | 0.303 | 20.3 | 68.93 | 1440 | -- | -- |
| 15.96 | 0.186 | 12.1 | 1.01 | 0.0691 | 0.487 | 0.354 | -- | 0.306 | 20.3 | 68.99 | 1442 | -- | -- |
| 16.31 | 0.188 | 12.1 | 0.993 | 0.0652 | 0.475 | -- | 0.148 | 0.302 | 20.7 | 68.18 | 1438 | -- | -- |
| 16.34 | 0.188 | 12.1 | 1.01 | 0.0679 | 0.483 | -- | -- | 0.305 | 20.4 | 68.07 | 1443 | -- | -- |
| 16.57 | 0.19 | 12.1 | 0.991 | -- | 0.477 | -- | 0.14 | 0.301 | -- | 68.19 | 1440 | -- | -- |
| 19.74 | 0.208 | 12.1 | 1.02 | 0.0758 | -- | 0.346 | -- | 0.251 | 19.9 | -- | -- | -- | -- |
| 20.09 | 0.21 | 12.1 | 1.01 | 0.0754 | -- | -- | -- | 0.251 | 20.2 | -- | -- | -- | -- |
| 16.59 | 0.19 | 12.1 | 1.01 | -- | 0.482 | -- | -- | 0.304 | -- | 68 | 1440 | -- | -- |
| 41.14 | 0.299 | 12.1 | -- | 0.118 | 0.568 | -- | -- | 0.329 | 21.5 | 81 | 6866 | -- | -- |
| 20.4 | 0.211 | 12.1 | 1.01 | -- | -- | -- | -- | 0.25 | -- | -- | -- | -- | -- |
| 47.05 | 0.321 | 12.1 | -- | 0.0727 | -- | -- | -- | 0.138 | 21.2 | -- | -- | -- | -- |
| 32.88 | 0.267 | 12.1 | -- | -- | 1.07 | -- | -- | 0.223 | -- | -8.833 | 47520 | -- | -- |
| 47.35 | 0.321 | 12.1 | -- | -- | -- | -- | -- | 0.138 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.94 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 2 | 15.14 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 2 | 4 |
| 6 | 15.24 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 9 | 15.30 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 10 | 15.30 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 11 | 15.30 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 13 | 15.33 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 14 | 15.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 28 | 15.43 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 34 | 15.45 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 4 | 14 |
| 36 | 15.46 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 18 | 16 |
| 42 | 15.47 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 57 | 15.48 | radiation | 20.0 | 4320 | < th | dose independent | sin | 11 | NA |
| 71 | 15.48 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 77 | 15.48 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 4 | 14 |
| 85 | 15.49 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 5 |
| 98 | 15.51 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 16 |
| 102 | 15.52 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 110 | 15.53 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 115 | 15.54 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 144 | 15.56 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 168 | 15.58 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 7 | 11 |
| 183 | 15.58 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 7 | 11 |
| 224 | 15.62 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 254 | 15.63 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 15 | 19 |
| 255 | 15.64 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 268 | 15.65 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 274 | 15.65 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 7 |
| 283 | 15.65 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 321 | 15.67 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 17 | 17 |
| 340 | 15.69 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 341 | 15.69 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 6 | 3 |
| 360 | 15.69 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 12 | NA |
| 364 | 15.69 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 4 | 6 |
| 381 | 15.69 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 17 | 17 |
| 389 | 15.70 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 391 | 15.70 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 396 | 15.70 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 423 | 15.71 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 424 | 15.71 | radiation | 20.0 | 4320 | > th | dose dependent | sin | 12 | NA |
| 426 | 15.71 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 429 | 15.71 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 6 | 4 |
| 491 | 15.74 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 498 | 15.74 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 15 | 19 |
| 530 | 15.77 | radiation | 20.0 | 4320 | > th | dose independent | sin | 12 | NA |
| 611 | 15.79 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 11 | 7 |
| 612 | 15.79 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 11 | 7 |
| 624 | 15.79 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 11 | 7 |
| 625 | 15.79 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 17 | 14 |
| 664 | 15.81 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 707 | 15.82 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 13 | 5 |
| 739 | 15.82 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 21 | NA |
| 743 | 15.82 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 13 | 5 |
| 769 | 15.82 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 20 | 22 |
| 773 | 15.83 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 851 | 15.85 | precipitation | 0.1 | 10 | > th | dose independent | sin | 21 | NA |
| 852 | 15.85 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 861 | 15.85 | radiation | 40.0 | 4320 | < th | dose dependent | sin | 11 | NA |
| 876 | 15.86 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 1 |
| 912 | 15.86 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 0 | NA |
| 913 | 15.86 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 976 | 15.87 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 17 |
| 986 | 15.87 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 997 | 15.87 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 17 |
| 998 | 15.87 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 18 |