BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0580100 Os02g0580100|AK072442
         (523 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0580100  Protein of unknown function DUF580 family protein   795   0.0  
Os07g0656100  Protein of unknown function DUF580 family protein    86   7e-17

>Os02g0580100 Protein of unknown function DUF580 family protein
          Length = 523

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/523 (77%), Positives = 404/523 (77%)

Query: 1   MSSSEGESANPSPCXXXXXXXXXXXXXXXXXXXXXXWPRRRCRDVFWXXXXXXXXXXXXX 60
           MSSSEGESANPSPC                      WPRRRCRDVFW             
Sbjct: 1   MSSSEGESANPSPCPAGPAAAAAVAGAAGVGVGAAAWPRRRCRDVFWLVVFLLHLLVFGG 60

Query: 61  XXXXTGLNRFGQADRFNIDRFTNLTAAPRFAGSXXXXXXXXXXXXXXXXXVTPKSELTES 120
               TGLNRFGQADRFNIDRFTNLTAAPRFAGS                 VTPKSELTES
Sbjct: 61  ALALTGLNRFGQADRFNIDRFTNLTAAPRFAGSPEPAREAPPPPSLEAEEVTPKSELTES 120

Query: 121 YWPYYXXXXXXXXXXXXXXXXXXXXXXXXXRVVMRAAVHSLTAYLAVVSVLCFWGKHFFW 180
           YWPYY                         RVVMRAAVHSLTAYLAVVSVLCFWGKHFFW
Sbjct: 121 YWPYYGAAGAVGTALAWAWLAAAAGKKDGGRVVMRAAVHSLTAYLAVVSVLCFWGKHFFW 180

Query: 181 GVAFAVGGALHFLYVMSVLDRFPFTMLVLQKAVRMVWELPDVMRIAYAFVLVMLCWMALW 240
           GVAFAVGGALHFLYVMSVLDRFPFTMLVLQKAVRMVWELPDVMRIAYAFVLVMLCWMALW
Sbjct: 181 GVAFAVGGALHFLYVMSVLDRFPFTMLVLQKAVRMVWELPDVMRIAYAFVLVMLCWMALW 240

Query: 241 SFGVSGILAFHIPNGGQWWALLIFSVSLFWTGAVLSNTVHVIVSGMVFLVLIHGGQAAAS 300
           SFGVSGILAFHIPNGGQWWALLIFSVSLFWTGAVLSNTVHVIVSGMVFLVLIHGGQAAAS
Sbjct: 241 SFGVSGILAFHIPNGGQWWALLIFSVSLFWTGAVLSNTVHVIVSGMVFLVLIHGGQAAAS 300

Query: 301 MPPKPLLKSLQYAVTTSFGSICYGSLFTAAIRTLRWEIRGIRSKIGNNECLLCCVDFLFH 360
           MPPKPLLKSLQYAVTTSFGSICYGSLFTAAIRTLRWEIRGIRSKIGNNECLLCCVDFLFH
Sbjct: 301 MPPKPLLKSLQYAVTTSFGSICYGSLFTAAIRTLRWEIRGIRSKIGNNECLLCCVDFLFH 360

Query: 361 IVETLVRFFNKYAYVQIAINGQSFNRSARDAWELFQSTGVEALVAYDCSGAVXXXXXXXX 420
           IVETLVRFFNKYAYVQIAINGQSFNRSARDAWELFQSTGVEALVAYDCSGAV        
Sbjct: 361 IVETLVRFFNKYAYVQIAINGQSFNRSARDAWELFQSTGVEALVAYDCSGAVLLMSTILG 420

Query: 421 XXXXXXXXXVWTYFKQSDKAIMVGSTSMXXXXXXXXXXXXXXXXXXXXXYICYAEDPRLI 480
                    VWTYFKQSDKAIMVGSTSM                     YICYAEDPRLI
Sbjct: 421 GLITGTCTGVWTYFKQSDKAIMVGSTSMLMGMILVGVTVVVVESAVTSIYICYAEDPRLI 480

Query: 481 QRWDPDFFDQMSEALHQRLQYRSARAHQILNSRLDQLPNTSSI 523
           QRWDPDFFDQMSEALHQRLQYRSARAHQILNSRLDQLPNTSSI
Sbjct: 481 QRWDPDFFDQMSEALHQRLQYRSARAHQILNSRLDQLPNTSSI 523



>Os07g0656100 Protein of unknown function DUF580 family protein
          Length = 550

 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 110/262 (41%), Gaps = 45/262 (17%)

Query: 182 VAFAVGGALHFLYVMSVLDRFPFTMLVLQKAVRMVWELPDVMRIAYAFVLVMLCWMALWS 241
           V F++G  L   Y   V  R  FT  V ++AV+ V +   +   AY  V     W+++W 
Sbjct: 218 VMFSIGTGL---YACWVTRRVGFTARVFERAVQPVDKFRGLNGPAYLMVAAGFVWISVWC 274

Query: 242 FGVSGILAFHIPNGGQWWALLIFSVSLFWTGAVLSNTVHVIVSGMVFLVLIHGGQAAASM 301
             V G   +  P       +L   +SL WT  V+ N  ++  S ++ L  + G Q++   
Sbjct: 275 VAVIGAANYRFPG----LTILGLVLSLMWTAEVMRNVANLTASRVIALYYLRGMQSSVQF 330

Query: 302 PPKPLLKSLQYAVTTSFGSICYGSLFTAAIRTLRWEIRGIRSKIGNNECLLCCVDFLFHI 361
                  S Q A++ + GS C GSLF   I  LR   RG+    G +E +  C     H+
Sbjct: 331 -------SFQRALSYNLGSACLGSLFVPTIEALRIVARGLNLLEGEDEFMFSCAHCCLHV 383

Query: 362 VETLVRFFNKYAYV------------------------------QIAINGQSFNRSARDA 391
           +  +  F N +A+V                              QIA  G+ F +++R  
Sbjct: 384 MNAIFEFGNSWAFVHVSFDGHTFFVLVAPWFKFVVTMADGWWCLQIAAYGRGFVQASRST 443

Query: 392 WELFQS-TGVEALVAYDCSGAV 412
           WE F+   G+ ALV  D + +V
Sbjct: 444 WEQFERLQGMPALVDSDITSSV 465



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.328    0.138    0.453 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,015,183
Number of extensions: 423519
Number of successful extensions: 1237
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1230
Number of HSP's successfully gapped: 3
Length of query: 523
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 418
Effective length of database: 11,553,331
Effective search space: 4829292358
Effective search space used: 4829292358
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 158 (65.5 bits)