BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0556900 Os02g0556900|AK067393
         (617 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0556900  DDT domain containing protein                      1209   0.0  
Os04g0439400  DDT domain containing protein                       306   4e-83

>Os02g0556900 DDT domain containing protein
          Length = 617

 Score = 1209 bits (3128), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 591/617 (95%), Positives = 591/617 (95%)

Query: 1   MPLFKRKPFSLLEPPKDLDSKEKVFQIRFTREIFRDYQDYINRLNLYRQRVWSCKISGKS 60
           MPLFKRKPFSLLEPPKDLDSKEKVFQIRFTREIFRDYQDYINRLNLYRQRVWSCKISGKS
Sbjct: 1   MPLFKRKPFSLLEPPKDLDSKEKVFQIRFTREIFRDYQDYINRLNLYRQRVWSCKISGKS 60

Query: 61  NLTFEEALVSEHHAVSKAQKLPTELMAPVLRMIQYSTLGLYELVEKIYASLQEAVFEGLE 120
           NLTFEEALVSEHHAVSKAQKLPTELMAPVLRMIQYSTLGLYELVEKIYASLQEAVFEGLE
Sbjct: 61  NLTFEEALVSEHHAVSKAQKLPTELMAPVLRMIQYSTLGLYELVEKIYASLQEAVFEGLE 120

Query: 121 LYAKQDGLEAACRILKILGSDGTKMYEVGWLLRDKTIISTSVIKGEDLIHRRPPVSRNTL 180
           LYAKQDGLEAACRILKILGSDGTKMYEVGWLLRDKTIISTSVIKGEDLIHRRPPVSRNTL
Sbjct: 121 LYAKQDGLEAACRILKILGSDGTKMYEVGWLLRDKTIISTSVIKGEDLIHRRPPVSRNTL 180

Query: 181 KIFIRDATSQNAPWVIHENLAKRYGIPIEPPNDMMFGEGLQKKGRKRREDGPMGDPKKKM 240
           KIFIRDATSQNAPWVIHENLAKRYGIPIEPPNDMMFGEGLQKKGRKRREDGPMGDPKKKM
Sbjct: 181 KIFIRDATSQNAPWVIHENLAKRYGIPIEPPNDMMFGEGLQKKGRKRREDGPMGDPKKKM 240

Query: 241 KNDEEHINVPIKYPIDDLLVQPSADDHALLKRPPLATDFRVPKYSVGDLLMVWDFCLSFG 300
           KNDEEHINVPIKYPIDDLLVQPSADDHALLKRPPLATDFRVPKYSVGDLLMVWDFCLSFG
Sbjct: 241 KNDEEHINVPIKYPIDDLLVQPSADDHALLKRPPLATDFRVPKYSVGDLLMVWDFCLSFG 300

Query: 301 RVLNLSPFSLVDLENAICHKESNALLVEIHTAIFHLLIKDEGDYFTIXXXXXXXXXXXXX 360
           RVLNLSPFSLVDLENAICHKESNALLVEIHTAIFHLLIKDEGDYFTI             
Sbjct: 301 RVLNLSPFSLVDLENAICHKESNALLVEIHTAIFHLLIKDEGDYFTILRTKKRKLKVTLV 360

Query: 361 XWAEYLCDFLEMTKTEELTRNIATVRKGYYSLIDTDIKLKILRELVEEAITTSPVREKLS 420
            WAEYLCDFLEMTKTEELTRNIATVRKGYYSLIDTDIKLKILRELVEEAITTSPVREKLS
Sbjct: 361 TWAEYLCDFLEMTKTEELTRNIATVRKGYYSLIDTDIKLKILRELVEEAITTSPVREKLS 420

Query: 421 ERVDQRQALAATKRESTRKAKDEQNSSIDGLQDDNESVXXXXXXXXXXXXNNISRSKTEG 480
           ERVDQRQALAATKRESTRKAKDEQNSSIDGLQDDNESV            NNISRSKTEG
Sbjct: 421 ERVDQRQALAATKRESTRKAKDEQNSSIDGLQDDNESVDEQGKGKEEKDKNNISRSKTEG 480

Query: 481 KRHGVQHLETEIEKLSIRSSPLGKDRHYNRYWFFRREGRLFVESADSKEWGYYSTKEELD 540
           KRHGVQHLETEIEKLSIRSSPLGKDRHYNRYWFFRREGRLFVESADSKEWGYYSTKEELD
Sbjct: 481 KRHGVQHLETEIEKLSIRSSPLGKDRHYNRYWFFRREGRLFVESADSKEWGYYSTKEELD 540

Query: 541 VLMSSLNVKGLRERALKRQLDKLYSKISNALEKRSKEITHKLLLEEAVLRRSTRVRAQPR 600
           VLMSSLNVKGLRERALKRQLDKLYSKISNALEKRSKEITHKLLLEEAVLRRSTRVRAQPR
Sbjct: 541 VLMSSLNVKGLRERALKRQLDKLYSKISNALEKRSKEITHKLLLEEAVLRRSTRVRAQPR 600

Query: 601 DNPSMSFLKYVNKWKDN 617
           DNPSMSFLKYVNKWKDN
Sbjct: 601 DNPSMSFLKYVNKWKDN 617



>Os04g0439400 DDT domain containing protein
          Length = 287

 Score =  306 bits (783), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 154/265 (58%), Positives = 192/265 (72%), Gaps = 13/265 (4%)

Query: 111 LQEAVFEGLELYAKQDGLEAACRILK-ILGSDGTKMYEVGWLLRDKTIISTSVIKGEDLI 169
           LQE  FEGLEL  ++DG  +AC+ILK I+GS  TKMYEVGW+ +D    +TSV++ +DL+
Sbjct: 33  LQEDFFEGLELNGRKDGSVSACKILKVIIGSGNTKMYEVGWIGQDNAETNTSVLQADDLV 92

Query: 170 HRRPP-VSRNTLKIFIRDATSQNAPWVIHENLAKRYGIPIEPPNDMMFGEGLQKKGRKRR 228
            R+    SR+ LKI+IR++TSQN+PW+IH NLAK+YGIP EPP D++ G+GL K  R+  
Sbjct: 93  IRKKARASRSMLKIYIRESTSQNSPWIIHANLAKKYGIPTEPPKDLLNGQGLPKL-RRGL 151

Query: 229 EDGPMGDPKKKMKNDEEHINVPIKYPIDDLLVQPSADDHALLKRPPLATDFRVPKYSVGD 288
           E+G   D +KK+K  E         PIDDLL++P+ADD +L KR PL+TDFRVP  SVGD
Sbjct: 152 ENGTTDDVRKKLKKGE---------PIDDLLLRPTADDPSLSKRRPLSTDFRVPVDSVGD 202

Query: 289 LLMVWDFCLSFGRVLNLSPFSLVDLENAICHKESN-ALLVEIHTAIFHLLIKDEGDYFTI 347
           LLMVWDFC+++GR+L LSPFSL DLENAICHKESN  LLVE+H A+FHLLIKD G YF  
Sbjct: 203 LLMVWDFCMTYGRILCLSPFSLSDLENAICHKESNLVLLVELHAALFHLLIKDGGGYFMF 262

Query: 348 XXXXXXXXXXXXXXWAEYLCDFLEM 372
                         WAEYLCDFLEM
Sbjct: 263 LQNKRRKLKVTLVTWAEYLCDFLEM 287



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.318    0.135    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 19,554,174
Number of extensions: 800695
Number of successful extensions: 2132
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2129
Number of HSP's successfully gapped: 2
Length of query: 617
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 510
Effective length of database: 11,448,903
Effective search space: 5838940530
Effective search space used: 5838940530
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 159 (65.9 bits)