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Os04g0439400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : DDT domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.23 (0.0348) R2 : 0.666
β1 : 0.0568 (0.135) R2dD : -9.24e-05 R2D : -0.00913
β2 : 2.32 (0.0854) R2dC : 0.545 R2C : 0.583
β3 : 0.236 (0.243) R2dE : 0.000379 R2E : 0.00394
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 15.8 (1.78) R2dD*E : 0.0776 R2D*E : 0.117
γ1 : -0.0422 (0.0738) R2dN8 : 0.000537 R2N8 : -0.00791
σ : 0.644
deviance : 191.17
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_____
C
peak time of C : 9.31
E
wheather : wind
threshold : 0.99
memory length : 74
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 0.9
open length of G : 4.07

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
187.92 0.644 7.24 0.019 2.29 0.321 -1.06 13.2 -0.0591 9.32 0.9874 88 0.916 4.03
205.88 0.668 7.29 -0.166 2.09 0.9 -0.871 -- -0.106 9.75 3.106 207 2.25 3.24
191.17 0.644 7.23 0.0568 2.32 0.236 -- 15.8 -0.0422 9.31 0.99 74 0.9 4.07
207.99 0.672 7.32 -0.511 2.12 1.12 -- -- -0.198 10.1 3.1 209 1.84 3.85
494.47 1.04 7.29 0.0203 -- 0.643 -- 17 -0.0359 -- 0.9971 80 0.9 4.03
228.77 0.709 7.29 -0.375 2.41 -- -0.82 -- -0.125 9.06 -- -- -- --
231.08 0.712 7.29 -0.404 2.42 -- -- -- -0.126 9.03 -- -- -- --
226.99 0.702 7.32 -0.589 -- 1.96 -- -- -0.168 -- 6 781 0.55 4.37
212.61 0.679 7.3 -- 2.11 1.09 -- -- -0.111 9.99 3.498 205 2.11 3.47
566.84 1.11 7.35 -0.408 -- -- -- -- -0.112 -- -- -- -- --
235.39 0.718 7.28 -- 2.42 -- -- -- -0.0814 9.04 -- -- -- --
227.77 0.703 7.35 -- -- 1.97 -- -- -0.0942 -- 6.2 763 0.483 5.02
571.23 1.12 7.34 -- -- -- -- -- -0.0664 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 190.24 wind 1.0 90 < th dose independent rect. 1 4
2 192.72 wind 1.0 90 < th dose independent rect. 3 2
5 194.69 humidity 80.0 720 < th dose dependent rect. 19 2
6 194.79 wind 1.0 270 < th dose dependent rect. 4 1
7 194.79 temperature 30.0 720 > th dose dependent rect. 18 1
38 195.63 humidity 80.0 720 < th dose dependent rect. 18 4
41 195.80 humidity 50.0 1440 > th dose independent rect. 16 1
43 196.24 radiation 1.0 1440 < th dose independent rect. 11 1
44 196.24 radiation 1.0 1440 < th dose dependent rect. 11 1
56 197.33 temperature 25.0 720 > th dose dependent rect. 20 1
57 197.60 wind 3.0 10 < th dose dependent rect. 4 3
62 197.76 humidity 50.0 1440 < th dose independent rect. 16 1
63 197.92 humidity 50.0 1440 < th dose dependent rect. 16 1
64 198.02 temperature 20.0 90 > th dose independent rect. 3 3
67 198.37 humidity 70.0 720 < th dose independent rect. 19 13
72 198.48 temperature 25.0 720 > th dose dependent rect. 20 3
75 198.69 temperature 20.0 90 > th dose dependent rect. 3 3
77 198.80 wind 1.0 90 < th dose dependent rect. 4 13
82 198.87 wind 1.0 90 < th dose dependent rect. 4 9
101 199.41 radiation 1.0 1440 < th dose dependent rect. 8 8
102 199.42 humidity 80.0 720 < th dose dependent rect. 18 14
106 199.50 temperature 20.0 90 > th dose independent rect. 4 1
112 199.70 radiation 1.0 1440 < th dose dependent rect. 13 3
118 199.76 temperature 30.0 720 > th dose independent rect. 18 1
135 199.79 temperature 20.0 10 > th dose dependent rect. 3 3
139 199.91 wind 1.0 90 < th dose independent rect. 4 9
143 199.97 humidity 70.0 720 < th dose independent rect. 18 2
160 200.07 temperature 20.0 10 > th dose independent rect. 3 3
161 200.11 precipitation 0.1 270 > th dose independent rect. 2 2
162 200.12 precipitation 0.1 270 > th dose dependent rect. 2 2
163 200.14 wind 1.0 90 < th dose dependent rect. 1 4
168 200.27 humidity 60.0 14400 > th dose independent rect. 4 4
181 200.62 humidity 50.0 720 > th dose dependent rect. 17 9
182 200.63 humidity 90.0 90 > th dose dependent rect. 4 1
187 200.77 radiation 1.0 1440 < th dose independent rect. 11 5
202 200.84 radiation 1.0 1440 < th dose independent rect. 9 7
215 200.95 radiation 1.0 90 < th dose dependent rect. 5 22
216 200.96 radiation 1.0 90 < th dose independent rect. 5 22
227 201.09 temperature 20.0 270 > th dose independent rect. 1 4
235 201.15 radiation 1.0 1440 > th dose independent rect. 11 5
257 201.35 radiation 1.0 1440 < th dose independent rect. 9 3
258 201.35 radiation 1.0 1440 < th dose dependent rect. 9 3
260 201.36 wind 1.0 90 < th dose independent rect. 4 13
279 201.48 humidity 90.0 90 > th dose independent rect. 4 1
293 201.63 radiation 1.0 1440 < th dose independent rect. 13 2
309 201.78 radiation 1.0 1440 > th dose independent rect. 13 2
336 201.91 humidity 60.0 14400 > th dose independent rect. 1 7
370 202.27 humidity 70.0 720 > th dose independent rect. 17 9
413 202.81 temperature 25.0 90 < th dose independent rect. 4 1
479 203.32 radiation 1.0 1440 > th dose independent rect. 11 1
489 203.43 wind 1.0 90 < th dose independent rect. 1 11
506 203.57 humidity 70.0 720 > th dose independent rect. 17 16
540 203.77 temperature 30.0 1440 < th dose independent rect. 18 3
591 204.06 temperature 30.0 1440 < th dose independent rect. 18 8
621 204.26 wind 3.0 30 < th dose dependent sin 5 NA
647 204.45 humidity 70.0 1440 > th dose independent rect. 19 13
670 204.52 radiation 20.0 1440 < th dose dependent rect. 11 17
676 204.54 radiation 20.0 1440 < th dose dependent rect. 11 14
678 204.55 radiation 20.0 1440 < th dose dependent rect. 11 7
691 204.59 radiation 20.0 1440 < th dose dependent rect. 11 11
693 204.59 radiation 10.0 1440 < th dose dependent rect. 9 19
698 204.62 radiation 10.0 1440 < th dose dependent rect. 9 16
706 204.66 humidity 90.0 270 > th dose dependent rect. 2 3
715 204.68 radiation 10.0 1440 < th dose dependent rect. 9 13
744 204.83 temperature 25.0 270 < th dose independent rect. 1 4
748 204.84 temperature 25.0 90 < th dose independent rect. 3 4
769 204.92 humidity 70.0 90 > th dose dependent rect. 3 4
785 205.02 wind 7.0 4320 > th dose independent rect. 17 1
800 205.10 radiation 20.0 1440 < th dose dependent sin 18 NA
830 205.13 humidity 70.0 720 > th dose independent sin 12 NA
837 205.14 wind 5.0 90 < th dose dependent rect. 23 8
867 205.25 atmosphere 1015.0 90 < th dose dependent rect. 4 1
871 205.27 humidity 70.0 720 > th dose dependent rect. 19 4
889 205.34 humidity 70.0 1440 > th dose independent rect. 19 5
897 205.37 humidity 70.0 1440 > th dose independent rect. 19 3
913 205.40 humidity 90.0 270 > th dose independent rect. 1 4
918 205.41 temperature 30.0 1440 < th dose independent rect. 18 14
925 205.43 radiation 10.0 90 < th dose dependent rect. 14 13
947 205.50 atmosphere 1005.0 90 > th dose independent rect. 3 4
955 205.52 wind 1.0 270 > th dose independent rect. 4 22
967 205.56 humidity 90.0 90 > th dose independent rect. 3 3