BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0511600 Os02g0511600|AK111241
         (132 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0511600  Glycosyl transferase, family 31 protein             223   3e-59
Os12g0138800  Similar to Elicitor-inducible cytochrome P450        82   1e-16
Os11g0523200                                                       79   1e-15
Os06g0620500                                                       69   1e-12

>Os02g0511600 Glycosyl transferase, family 31 protein
          Length = 132

 Score =  223 bits (568), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 113/123 (91%), Positives = 113/123 (91%)

Query: 10  FVFVSLALLCDASQGEGXXXXXXXXXXDLVVRQRATGRVVEGKPEYAVEVANRCRCAQSR 69
           FVFVSLALLCDASQGEG          DLVVRQRATGRVVEGKPEYAVEVANRCRCAQSR
Sbjct: 10  FVFVSLALLCDASQGEGAAAAAACRAADLVVRQRATGRVVEGKPEYAVEVANRCRCAQSR 69

Query: 70  VVLRCYGLSSVESVDPRAIRPVDDERCVLRGGRVIRRGAPPVRFTYAWMTPFDFPLVSSQ 129
           VVLRCYGLSSVESVDPRAIRPVDDERCVLRGGRVIRRGAPPVRFTYAWMTPFDFPLVSSQ
Sbjct: 70  VVLRCYGLSSVESVDPRAIRPVDDERCVLRGGRVIRRGAPPVRFTYAWMTPFDFPLVSSQ 129

Query: 130 VHC 132
           VHC
Sbjct: 130 VHC 132



>Os12g0138800 Similar to Elicitor-inducible cytochrome P450
          Length = 295

 Score = 81.6 bits (200), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/62 (70%), Positives = 46/62 (74%), Gaps = 1/62 (1%)

Query: 10 FVFVSLALLCDAS-QGEGXXXXXXXXXXDLVVRQRATGRVVEGKPEYAVEVANRCRCAQS 68
          FVFVSL LLC+AS QGEG          DLVVRQRATGRVVEGKPEYAVEVANRCR    
Sbjct: 38 FVFVSLTLLCNASSQGEGAAAAAACRAADLVVRQRATGRVVEGKPEYAVEVANRCRWVTL 97

Query: 69 RV 70
          R+
Sbjct: 98 RL 99



>Os11g0523200 
          Length = 125

 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 2/97 (2%)

Query: 37  DLVVRQRATGRVVEGKPEYAVEVANRCRCAQSRVVLRCYGLSSVESVDPRAIRP-VDDER 95
           ++VV+Q ATG    G+PEYAV V+N C C QS V + C G  +  +VDP  +RP      
Sbjct: 30  NIVVKQTATGGWAHGQPEYAVTVSNMCGCPQSGVQVACDGFDTTLAVDPAKLRPAAGGNL 89

Query: 96  CVLRGGRVIRRGAPPVRFTYAWMTPFDFPLVSSQVHC 132
           C++  G  + +G   + F+YAW + F F  VSS V C
Sbjct: 90  CLVNSGDPVVQGH-DITFSYAWSSQFKFTPVSSTVKC 125



>Os06g0620500 
          Length = 141

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 6/101 (5%)

Query: 37  DLVVRQRATGRVVEGKPEYAVEVANRCRCAQSRVVLRC-----YGLSSVESVDPRAIRPV 91
           D+ V    TG+VVEG+PEY V V+N C C Q+ V + C      G+ SVE VD   IR  
Sbjct: 41  DITVTAARTGKVVEGQPEYEVAVSNGCACPQNGVRVSCPGGGGGGVPSVEPVDESKIRAD 100

Query: 92  DDERCVLRGGRVIRRGAPPVRFTYAWMTPFDFPLVSSQVHC 132
           +   C++  G  + +G+ PV F YAW  P +F    +   C
Sbjct: 101 EAGLCLVNDGMPVAKGS-PVTFVYAWKQPLEFAAAQATPRC 140



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.327    0.140    0.443 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,986,967
Number of extensions: 142345
Number of successful extensions: 396
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 400
Number of HSP's successfully gapped: 4
Length of query: 132
Length of database: 17,035,801
Length adjustment: 90
Effective length of query: 42
Effective length of database: 12,336,541
Effective search space: 518134722
Effective search space used: 518134722
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 150 (62.4 bits)