Os02g0511600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 31 protein.
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Os02g0511600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 31 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 390.14 | 0.928 | 3.39 | -0.138 | 0.326 | 1.15 | -0.022 | 3.29 | -0.195 | 6.63 | 1015 | 3768 | -- | -- |
| 402.42 | 0.934 | 3.37 | 0.129 | 0.31 | 0.721 | -0.243 | -- | -0.144 | 6.41 | 1013 | 3403 | -- | -- |
| 388.76 | 0.918 | 3.4 | -0.0591 | 0.359 | 2.62 | -- | 6.14 | -0.171 | 6.46 | 1016 | 3618 | -- | -- |
| 402.55 | 0.934 | 3.37 | 0.125 | 0.308 | 0.724 | -- | -- | -0.144 | 6.66 | 1013 | 3400 | -- | -- |
| 394.18 | 0.925 | 3.4 | -0.0553 | -- | 3.13 | -- | 7.23 | -0.158 | -- | 1016 | 3606 | -- | -- |
| 410.48 | 0.95 | 3.38 | 0.0705 | 0.293 | -- | -0.25 | -- | -0.211 | 6.57 | -- | -- | -- | -- |
| 410.61 | 0.949 | 3.38 | 0.0675 | 0.292 | -- | -- | -- | -0.209 | 6.82 | -- | -- | -- | -- |
| 407.51 | 0.94 | 3.37 | 0.13 | -- | 0.707 | -- | -- | -0.139 | -- | 1013 | 3400 | -- | -- |
| 402.95 | 0.935 | 3.37 | -- | 0.309 | 0.713 | -- | -- | -0.159 | 6.63 | 1013 | 3401 | -- | -- |
| 415.09 | 0.952 | 3.39 | 0.0739 | -- | -- | -- | -- | -0.204 | -- | -- | -- | -- | -- |
| 410.73 | 0.948 | 3.39 | -- | 0.293 | -- | -- | -- | -0.217 | 6.8 | -- | -- | -- | -- |
| 407.93 | 0.941 | 3.38 | -- | -- | 0.689 | -- | -- | -0.157 | -- | 1013 | 3401 | -- | -- |
| 415.23 | 0.951 | 3.39 | -- | -- | -- | -- | -- | -0.212 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 382.70 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 2 | 383.56 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 3 | 386.56 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 18 | 6 |
| 4 | 386.56 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 18 | 6 |
| 9 | 387.42 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 10 | 387.42 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 13 | 387.64 | wind | 7.0 | 1440 | > th | dose independent | rect. | 21 | 12 |
| 14 | 387.79 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 19 | 6 |
| 15 | 387.82 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 19 | 3 |
| 16 | 387.91 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 19 | 3 |
| 21 | 388.13 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 19 | 6 |
| 30 | 388.36 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 9 |
| 37 | 388.54 | wind | 7.0 | 1440 | < th | dose independent | rect. | 21 | 12 |
| 56 | 389.31 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 6 | 3 |
| 63 | 389.62 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 2 | 10 |
| 64 | 389.64 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 21 | 12 |
| 65 | 389.70 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 4 | 8 |
| 74 | 389.82 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 4 | 8 |
| 80 | 389.90 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 2 | 10 |
| 86 | 389.99 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 21 | 3 |
| 88 | 389.99 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 21 | 3 |
| 92 | 390.02 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 103 | 390.15 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 107 | 390.19 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 111 | 390.26 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 125 | 390.41 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 132 | 390.47 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 21 | 4 |
| 133 | 390.47 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 21 | 4 |
| 134 | 390.48 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 136 | 390.50 | wind | 3.0 | 1440 | < th | dose independent | rect. | 18 | 11 |
| 157 | 390.68 | wind | 3.0 | 1440 | > th | dose independent | rect. | 18 | 11 |
| 170 | 390.78 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 21 | 9 |
| 184 | 390.91 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 23 | 6 |
| 199 | 390.98 | wind | 7.0 | 1440 | < th | dose independent | rect. | 24 | 9 |
| 223 | 391.10 | wind | 3.0 | 1440 | < th | dose independent | rect. | 20 | 9 |
| 236 | 391.15 | wind | 3.0 | 1440 | > th | dose independent | rect. | 20 | 9 |
| 301 | 391.37 | wind | 3.0 | 90 | > th | dose dependent | rect. | 1 | 8 |
| 302 | 391.38 | temperature | 20.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 305 | 391.38 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 16 | 14 |
| 327 | 391.43 | wind | 3.0 | 1440 | < th | dose independent | rect. | 18 | 17 |
| 328 | 391.43 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 332 | 391.44 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 18 | 9 |
| 351 | 391.49 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 21 | 15 |
| 357 | 391.50 | wind | 3.0 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 367 | 391.52 | wind | 3.0 | 1440 | > th | dose independent | rect. | 18 | 17 |
| 391 | 391.57 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 397 | 391.57 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 417 | 391.63 | wind | 3.0 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 419 | 391.64 | atmosphere | 1015.0 | 4320 | > th | dose independent | sin | 13 | NA |
| 426 | 391.65 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 16 | 14 |
| 427 | 391.66 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 17 | 12 |
| 479 | 391.75 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 22 | 5 |
| 553 | 391.93 | wind | 3.0 | 1440 | > th | dose independent | sin | 10 | NA |
| 554 | 391.93 | atmosphere | 1015.0 | 4320 | < th | dose independent | sin | 12 | NA |
| 585 | 391.99 | wind | 7.0 | 90 | < th | dose dependent | rect. | 21 | 14 |
| 590 | 392.01 | wind | 3.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 597 | 392.03 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 21 | 8 |
| 616 | 392.08 | wind | 3.0 | 1440 | > th | dose independent | rect. | 20 | 15 |
| 668 | 392.20 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 21 | 8 |
| 683 | 392.24 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 22 | 5 |
| 687 | 392.26 | wind | 5.0 | 720 | < th | dose independent | rect. | 23 | 2 |
| 698 | 392.27 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 799 | 392.48 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 8 |
| 803 | 392.49 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 821 | 392.53 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 827 | 392.54 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 851 | 392.59 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 868 | 392.61 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 872 | 392.61 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 21 | 3 |
| 889 | 392.63 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 896 | 392.64 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 23 | 11 |
| 970 | 392.77 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 992 | 392.81 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 995 | 392.82 | wind | 5.0 | 90 | > th | dose independent | rect. | 1 | 8 |