Os12g0138800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Elicitor-inducible cytochrome P450.
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Os12g0138800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Elicitor-inducible cytochrome P450.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 283.63 | 0.791 | 6.79 | -4.51 | 0.615 | 4.15 | -1.78 | -4.79 | -0.748 | 12.3 | 23.77 | 1256 | 12.6 | -- |
| 298.07 | 0.804 | 6.63 | -3.18 | 0.657 | 3.93 | -1.5 | -- | -0.335 | 12.6 | 23.53 | 1231 | 12.5 | -- |
| 296.55 | 0.802 | 6.78 | -4.5 | 0.639 | 4.14 | -- | -4.38 | -0.745 | 12 | 23.81 | 1251 | 12.8 | -- |
| 303.89 | 0.812 | 6.65 | -3.28 | 0.686 | 3.77 | -- | -- | -0.439 | 11.9 | 23.47 | 1234 | 13 | -- |
| 311.99 | 0.823 | 6.8 | -4.48 | -- | 3.9 | -- | -4.23 | -0.719 | -- | 23.99 | 1338 | 12.9 | -- |
| 785.93 | 1.31 | 6.52 | -2.04 | 0.342 | -- | 2.35 | -- | 0.154 | 3.04 | -- | -- | -- | -- |
| 798.25 | 1.32 | 6.52 | -2.09 | 0.503 | -- | -- | -- | 0.137 | 5.73 | -- | -- | -- | -- |
| 319.71 | 0.833 | 6.66 | -3.29 | -- | 3.55 | -- | -- | -0.432 | -- | 23.71 | 1335 | 12 | -- |
| 565.68 | 1.11 | 6.51 | -- | 0.627 | 3.04 | -- | -- | 0.186 | 11.3 | 24.86 | 1184 | 11.6 | -- |
| 811.35 | 1.33 | 6.53 | -2.08 | -- | -- | -- | -- | 0.149 | -- | -- | -- | -- | -- |
| 913.87 | 1.41 | 6.47 | -- | 0.47 | -- | -- | -- | 0.37 | 5.93 | -- | -- | -- | -- |
| 577.26 | 1.12 | 6.5 | -- | -- | 2.91 | -- | -- | 0.244 | -- | 25.3 | 1282 | 9.48 | -- |
| 925.33 | 1.42 | 6.47 | -- | -- | -- | -- | -- | 0.379 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 302.97 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 13 |
| 20 | 303.95 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 35 | 304.96 | temperature | 25 | 1440 | > th | dose dependent | sin | 17 | NA |
| 146 | 315.13 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 152 | 315.31 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 20 |
| 170 | 315.48 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 178 | 315.55 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 204 | 316.30 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 810 | 351.27 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 18 |
| 817 | 351.38 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 819 | 351.41 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 12 |
| 822 | 351.44 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 6 |
| 827 | 351.51 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 9 |
| 896 | 353.54 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 5 |
| 973 | 355.42 | temperature | 30 | 1440 | < th | dose independent | sin | 18 | NA |
| 991 | 355.85 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 6 |