BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0477700 Os02g0477700|AK067614
         (171 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0477700  Similar to Type II inositol-1,4,5-trisphosphat...   324   2e-89
Os08g0524100  Similar to Type II inositol-1,4,5-trisphosphat...   171   2e-43
Os09g0500300  Similar to Type II inositol-1,4,5-trisphosphat...   154   3e-38

>Os02g0477700 Similar to Type II inositol-1,4,5-trisphosphate 5-phosphatase 12
           (EC 3.1.3.36) (At5PTase12) (FRAGILE FIBER3 protein)
          Length = 171

 Score =  324 bits (831), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 159/171 (92%), Positives = 159/171 (92%)

Query: 1   SPGPIDNIMRSTLIEAEPLYKQFEYMKVLVGSWNVGQEKASYESLRAWLKLPTPXXXXXX 60
           SPGPIDNIMRSTLIEAEPLYKQFEYMKVLVGSWNVGQEKASYESLRAWLKLPTP      
Sbjct: 1   SPGPIDNIMRSTLIEAEPLYKQFEYMKVLVGSWNVGQEKASYESLRAWLKLPTPEVGLVV 60

Query: 61  XXXXXXDMGAGFLAMSAAKETVGLEGSPNGDWWLDAIGQQLKGYSFERVGSRQMAGLLIC 120
                 DMGAGFLAMSAAKETVGLEGSPNGDWWLDAIGQQLKGYSFERVGSRQMAGLLIC
Sbjct: 61  VGLQEVDMGAGFLAMSAAKETVGLEGSPNGDWWLDAIGQQLKGYSFERVGSRQMAGLLIC 120

Query: 121 VWVRTHLKQFIGDIDNAAVACGLGRAIGNKVLLLSYCPTLSWRKMSLKCCL 171
           VWVRTHLKQFIGDIDNAAVACGLGRAIGNKVLLLSYCPTLSWRKMSLKCCL
Sbjct: 121 VWVRTHLKQFIGDIDNAAVACGLGRAIGNKVLLLSYCPTLSWRKMSLKCCL 171



>Os08g0524100 Similar to Type II inositol-1,4,5-trisphosphate 5-phosphatase 12
           (EC 3.1.3.36) (At5PTase12) (FRAGILE FIBER3 protein)
          Length = 1107

 Score =  171 bits (434), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 87/151 (57%), Positives = 106/151 (70%), Gaps = 1/151 (0%)

Query: 1   SPGPIDNIMRSTLIEAEPLYKQFEYMKVLVGSWNVGQEKASYESLRAWLKLPTPXXXXXX 60
           SPGP+D+I+R+ L   E  Y++   +K+LVG+WNVGQEKASYESL +WL           
Sbjct: 512 SPGPLDDILRTELSNRELSYRRLVNIKMLVGTWNVGQEKASYESLMSWLGRAFFDVDLVV 571

Query: 61  XXXXXXDMGAGFLAMSAAKETVGLEGSPNGDWWLDAIGQQL-KGYSFERVGSRQMAGLLI 119
                 +MGAG LAM+AAKE+VGLEGS NG WW+D IG+ L +G SF RVGSRQ+AGLLI
Sbjct: 572 VGLQEVEMGAGVLAMAAAKESVGLEGSANGQWWIDNIGRTLDEGISFHRVGSRQLAGLLI 631

Query: 120 CVWVRTHLKQFIGDIDNAAVACGLGRAIGNK 150
             W R  LK  +GD+D AAV CG GRAIGNK
Sbjct: 632 AAWARKDLKPHVGDVDAAAVPCGFGRAIGNK 662



>Os09g0500300 Similar to Type II inositol-1,4,5-trisphosphate 5-phosphatase 12
           (EC 3.1.3.36) (At5PTase12) (FRAGILE FIBER3 protein)
          Length = 1001

 Score =  154 bits (389), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 84/151 (55%), Positives = 105/151 (69%), Gaps = 1/151 (0%)

Query: 1   SPGPIDNIMRSTLIEAEPLYKQFEYMKVLVGSWNVGQEKASYESLRAWLKLPTPXXXXXX 60
           SPGP+D+I+R+ L   E  Y + E + ++VGSWNV Q KAS ESL++WL   +       
Sbjct: 394 SPGPLDDILRTELTNKELSYTRMEKINIMVGSWNVAQGKASAESLKSWLGSVSSDVGLVV 453

Query: 61  XXXXXXDMGAGFLAMSAAKETVGLEGSPNGDWWLDAIGQQL-KGYSFERVGSRQMAGLLI 119
                 +MGAGFLA+SAAKETVGLEGS NG WW+D IG+ L +G SF RVGSRQ+A LLI
Sbjct: 454 VGLQEVEMGAGFLAISAAKETVGLEGSANGQWWIDNIGKALDEGTSFHRVGSRQLAALLI 513

Query: 120 CVWVRTHLKQFIGDIDNAAVACGLGRAIGNK 150
             W R  LK ++GD++ AAV CG GRAIGNK
Sbjct: 514 AAWARKSLKPYVGDVEAAAVPCGFGRAIGNK 544



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.321    0.137    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,645,312
Number of extensions: 203517
Number of successful extensions: 401
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 397
Number of HSP's successfully gapped: 3
Length of query: 171
Length of database: 17,035,801
Length adjustment: 94
Effective length of query: 77
Effective length of database: 12,127,685
Effective search space: 933831745
Effective search space used: 933831745
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 152 (63.2 bits)