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Os02g0477700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Type II inositol-1,4,5-trisphosphate 5-phosphatase 12 (EC 3.1.3.36) (At5PTase12) (FRAGILE FIBER3 protein).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.31 (0.0132) R2 : 0.627
β1 : 1.15 (0.0484) R2dD : 0.478 R2D : 0.251
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.523 (0.0282) R2dN8 : 0.376 R2N8 : 0.149
σ : 0.248
deviance : 28.23
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
17.81 0.198 8.34 0.924 0.0376 0.614 0.564 0.27 0.358 18 21.3 2582 -- --
17.92 0.197 8.35 0.881 0.0293 0.57 0.531 -- 0.347 17.7 21.5 2518 -- --
18.55 0.201 8.34 0.93 0.0335 0.607 -- 0.25 0.362 18.2 21.47 2426 -- --
18.66 0.201 8.35 0.867 0.0306 0.574 -- -- 0.344 18.1 21.5 2420 -- --
18.59 0.201 8.34 0.934 -- 0.601 -- 0.247 0.359 -- 21.5 2390 -- --
27.29 0.245 8.31 1.16 0.0258 -- 0.607 -- 0.521 18.1 -- -- -- --
28.04 0.248 8.31 1.15 0.0565 -- -- -- 0.523 22.1 -- -- -- --
18.71 0.201 8.35 0.868 -- 0.574 -- -- 0.344 -- 21.53 2397 -- --
22.68 0.222 8.39 -- 0.0481 1.06 -- -- 0.165 21.2 17.84 47520 -- --
28.23 0.248 8.31 1.15 -- -- -- -- 0.523 -- -- -- -- --
62.85 0.371 8.34 -- 0.0652 -- -- -- 0.395 23.4 -- -- -- --
22.81 0.222 8.39 -- -- 1.03 -- -- 0.17 -- 17.9 47258 -- --
63.12 0.371 8.34 -- -- -- -- -- 0.395 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.99 temperature 25 1440 < th dose dependent rect. 17 19
15 18.05 temperature 25 1440 < th dose dependent rect. 17 13
22 18.06 temperature 25 1440 < th dose dependent rect. 17 11
29 18.07 temperature 25 1440 < th dose dependent sin 13 NA
31 18.07 temperature 25 1440 < th dose dependent rect. 17 9
40 18.07 temperature 25 1440 < th dose dependent rect. 9 21
78 18.10 temperature 25 1440 < th dose dependent rect. 24 23
79 18.11 temperature 25 1440 < th dose dependent no NA NA
118 18.13 temperature 25 1440 < th dose dependent rect. 3 23
178 18.19 temperature 25 1440 < th dose dependent rect. 21 1
191 18.21 temperature 25 1440 < th dose dependent rect. 24 12
327 18.45 temperature 25 1440 < th dose dependent rect. 24 1
340 18.48 temperature 30 1440 < th dose dependent rect. 5 1
365 18.55 temperature 10 1440 > th dose dependent rect. 5 1
371 18.56 temperature 25 1440 < th dose dependent rect. 3 5
374 18.56 temperature 10 1440 > th dose dependent rect. 24 7
409 18.62 temperature 10 1440 > th dose dependent rect. 24 1
445 18.67 temperature 10 1440 > th dose dependent rect. 3 3
459 18.68 temperature 20 4320 < th dose independent rect. 17 7
467 18.69 temperature 20 4320 > th dose independent rect. 17 7
519 18.74 temperature 20 4320 > th dose independent sin 17 NA
523 18.74 temperature 20 4320 < th dose independent rect. 12 12
573 18.79 temperature 20 4320 < th dose independent sin 17 NA
777 18.96 temperature 20 4320 < th dose independent rect. 9 18
807 18.98 temperature 10 1440 > th dose dependent sin 10 NA
876 19.02 temperature 20 1440 > th dose independent rect. 3 20
945 19.06 temperature 20 1440 < th dose independent rect. 3 10
947 19.06 temperature 20 1440 < th dose independent rect. 3 20
958 19.07 temperature 20 1440 > th dose independent rect. 3 10
960 19.07 temperature 20 1440 > th dose independent rect. 20 19