BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0224200 Os02g0224200|AK101100
(525 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0224200 Similar to Ser/Thr specific protein phosphatas... 988 0.0
Os06g0563300 Similar to Ser/Thr specific protein phosphatas... 887 0.0
>Os02g0224200 Similar to Ser/Thr specific protein phosphatase 2A B regulatory
subunit beta isoform
Length = 525
Score = 988 bits (2555), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/494 (96%), Positives = 475/494 (96%)
Query: 32 WRFAQVFGERAAGEDVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDSRDSASRSEL 91
WRFAQVFGERAAGEDVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDSRDSASRSEL
Sbjct: 32 WRFAQVFGERAAGEDVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDSRDSASRSEL 91
Query: 92 ERQDYPIARHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIKWCQTANNALFLLSTNDKT 151
ERQDYPIARHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIKWCQTANNALFLLSTNDKT
Sbjct: 92 ERQDYPIARHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIKWCQTANNALFLLSTNDKT 151
Query: 152 IKYWKVQERKVKRISVMNLXXXXXXXXXXXXXXXXXXXRAILPNGGCSEKLYNFPNNDLL 211
IKYWKVQERKVKRISVMNL RAILPNGGCSEKLYNFPNNDLL
Sbjct: 152 IKYWKVQERKVKRISVMNLNTSQSSGNGTTSSSSSSSSRAILPNGGCSEKLYNFPNNDLL 211
Query: 212 FPPGGCTSLRLPVVVTGQDLNLVPRCRRVYSHAHDYHINSISNNSDGETYISADDLRINL 271
FPPGGCTSLRLPVVVTGQDLNLVPRCRRVYSHAHDYHINSISNNSDGETYISADDLRINL
Sbjct: 212 FPPGGCTSLRLPVVVTGQDLNLVPRCRRVYSHAHDYHINSISNNSDGETYISADDLRINL 271
Query: 272 WNLEISNQSFNIVDVKPANMEDLTEVITCAEFHPTHCNTLAYSSSKGSIRLIDLRQSALC 331
WNLEISNQSFNIVDVKPANMEDLTEVITCAEFHPTHCNTLAYSSSKGSIRLIDLRQSALC
Sbjct: 272 WNLEISNQSFNIVDVKPANMEDLTEVITCAEFHPTHCNTLAYSSSKGSIRLIDLRQSALC 331
Query: 332 DNHAKLFEEHEAPGSRSFFTEIIASVSDIKFARDGRHILSRDYMTLKLWDINMDSGPVAT 391
DNHAKLFEEHEAPGSRSFFTEIIASVSDIKFARDGRHILSRDYMTLKLWDINMDSGPVAT
Sbjct: 332 DNHAKLFEEHEAPGSRSFFTEIIASVSDIKFARDGRHILSRDYMTLKLWDINMDSGPVAT 391
Query: 392 FQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRVFGCTPGSAEATTLE 451
FQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRVFGCTPGSAEATTLE
Sbjct: 392 FQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRVFGCTPGSAEATTLE 451
Query: 452 ASRNPMRRQVANPTRPARTLTSLTRAVRRGGENPGVDANGNSYDLSTKLLHLAWHPTENS 511
ASRNPMRRQVANPTRPARTLTSLTRAVRRGGENPGVDANGNSYDLSTKLLHLAWHPTENS
Sbjct: 452 ASRNPMRRQVANPTRPARTLTSLTRAVRRGGENPGVDANGNSYDLSTKLLHLAWHPTENS 511
Query: 512 IACAAANSLYMYYA 525
IACAAANSLYMYYA
Sbjct: 512 IACAAANSLYMYYA 525
>Os06g0563300 Similar to Ser/Thr specific protein phosphatase 2A B regulatory
subunit alpha isoform
Length = 598
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/494 (85%), Positives = 450/494 (91%), Gaps = 2/494 (0%)
Query: 32 WRFAQVFGERAAGEDVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDSRDSASRSEL 91
WRFAQVFGERAAGEDVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTD+RD+ASR E+
Sbjct: 107 WRFAQVFGERAAGEDVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDARDNASRREM 166
Query: 92 ERQDYPIARHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIKWCQTANNALFLLSTNDKT 151
ERQD PI RHPEFRYK+EFQSHEPEFDYLKSLEIEEKINKI+WCQTANN+L LLSTNDKT
Sbjct: 167 ERQDAPITRHPEFRYKSEFQSHEPEFDYLKSLEIEEKINKIRWCQTANNSLSLLSTNDKT 226
Query: 152 IKYWKVQERKVKRISVMNLXXXXXXXXXXXXXXXXXXXRAILPNGGCSEKLYNFPNNDLL 211
IKYWKVQE+KVK++SVMNL +LPNGGCS+K +F N+D+L
Sbjct: 227 IKYWKVQEKKVKQVSVMNLDSRSVGTGTSSSASTSSSR-GLLPNGGCSDK-SSFLNSDIL 284
Query: 212 FPPGGCTSLRLPVVVTGQDLNLVPRCRRVYSHAHDYHINSISNNSDGETYISADDLRINL 271
FPPGG SLRLPVVV QD+NLV RCRRVY+HAHDYHINSIS NSDGETYISADDLRINL
Sbjct: 285 FPPGGYPSLRLPVVVASQDVNLVARCRRVYAHAHDYHINSISTNSDGETYISADDLRINL 344
Query: 272 WNLEISNQSFNIVDVKPANMEDLTEVITCAEFHPTHCNTLAYSSSKGSIRLIDLRQSALC 331
WNLEI+NQSFNIVDVKP NMEDLTEVITCAEFHPTHCNTLAYSSSKGSIRLIDLRQSALC
Sbjct: 345 WNLEINNQSFNIVDVKPPNMEDLTEVITCAEFHPTHCNTLAYSSSKGSIRLIDLRQSALC 404
Query: 332 DNHAKLFEEHEAPGSRSFFTEIIASVSDIKFARDGRHILSRDYMTLKLWDINMDSGPVAT 391
DNH+K+FEEHEAPGSRSFFTEIIAS+SDIKF+RDGR+ILSRDYMTLKLWD+NMDSGPV+T
Sbjct: 405 DNHSKIFEEHEAPGSRSFFTEIIASISDIKFSRDGRYILSRDYMTLKLWDLNMDSGPVST 464
Query: 392 FQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRVFGCTPGSAEATTLE 451
FQVHE+LRPKLCDLYENDSIFDKFECCLSGDGL VATGSY NLFRVFGCTPGS EATTLE
Sbjct: 465 FQVHEHLRPKLCDLYENDSIFDKFECCLSGDGLHVATGSYGNLFRVFGCTPGSTEATTLE 524
Query: 452 ASRNPMRRQVANPTRPARTLTSLTRAVRRGGENPGVDANGNSYDLSTKLLHLAWHPTENS 511
ASRNPMRRQ+ NPTRP RTLTSL R VRRGGEN GVDANGNS+D STKLLHLAWHPTENS
Sbjct: 525 ASRNPMRRQIVNPTRPTRTLTSLARGVRRGGENQGVDANGNSFDFSTKLLHLAWHPTENS 584
Query: 512 IACAAANSLYMYYA 525
IACAAANSLYMYYA
Sbjct: 585 IACAAANSLYMYYA 598
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.134 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,792,629
Number of extensions: 691355
Number of successful extensions: 1681
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1674
Number of HSP's successfully gapped: 2
Length of query: 525
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 420
Effective length of database: 11,553,331
Effective search space: 4852399020
Effective search space used: 4852399020
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)