Os06g0563300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ser/Thr specific protein phosphatase 2A B regulatory subunit alpha isoform.
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Os06g0563300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ser/Thr specific protein phosphatase 2A B regulatory subunit alpha isoform.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.75 | 0.219 | 11.2 | -0.344 | 0.459 | -0.501 | -0.0995 | 1.84 | 0.023 | 3.93 | 29.9 | 277 | -- | -- |
| 21.98 | 0.218 | 11.2 | -0.185 | 0.48 | -0.318 | -0.0402 | -- | 0.00555 | 3.94 | 29.5 | 310 | -- | -- |
| 21.78 | 0.217 | 11.2 | -0.343 | 0.458 | -0.505 | -- | 1.82 | 0.0235 | 3.93 | 29.9 | 276 | -- | -- |
| 21.97 | 0.218 | 11.1 | -0.174 | 0.421 | -0.352 | -- | -- | 0.0494 | 4.11 | 30.57 | 560 | -- | -- |
| 29.39 | 0.252 | 11.2 | -0.344 | -- | -0.304 | -- | 1.06 | 0.0765 | -- | 30.7 | 2660 | -- | -- |
| 24.25 | 0.231 | 11.2 | -0.132 | 0.345 | -- | -0.14 | -- | 0.0286 | 3.56 | -- | -- | -- | -- |
| 24.31 | 0.231 | 11.2 | -0.13 | 0.344 | -- | -- | -- | 0.0295 | 3.53 | -- | -- | -- | -- |
| 29.1 | 0.251 | 11.1 | -0.172 | -- | -0.228 | -- | -- | 0.0774 | -- | 30.9 | 4003 | -- | -- |
| 22.73 | 0.222 | 11.1 | -- | 0.412 | -0.325 | -- | -- | 0.0737 | 4.09 | 30.5 | 560 | -- | -- |
| 30.91 | 0.26 | 11.2 | -0.116 | -- | -- | -- | -- | 0.0386 | -- | -- | -- | -- | -- |
| 24.76 | 0.233 | 11.2 | -- | 0.341 | -- | -- | -- | 0.044 | 3.53 | -- | -- | -- | -- |
| 29.82 | 0.254 | 11.1 | -- | -- | -0.205 | -- | -- | 0.0927 | -- | 30.4 | 3967 | -- | -- |
| 31.26 | 0.261 | 11.2 | -- | -- | -- | -- | -- | 0.0514 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.13 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 9 | 2 |
| 9 | 21.15 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 16 | 21.16 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 20 | 21.17 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 21 | 21.17 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 28 | 21.17 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 18 | 14 |
| 29 | 21.18 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 51 | 21.19 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 12 | 23 |
| 173 | 21.32 | atmosphere | 1000.0 | 14400 | < th | dose dependent | sin | 3 | NA |
| 205 | 21.35 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 15 | 12 |
| 206 | 21.35 | temperature | 30.0 | 270 | < th | dose independent | rect. | 13 | 23 |
| 243 | 21.39 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 277 | 21.42 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 295 | 21.43 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 12 |
| 309 | 21.44 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 355 | 21.47 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 12 | 10 |
| 438 | 21.52 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 440 | 21.52 | temperature | 30.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 470 | 21.53 | atmosphere | 1000.0 | 14400 | < th | dose independent | sin | 3 | NA |
| 479 | 21.53 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 15 | 6 |
| 503 | 21.54 | atmosphere | 1000.0 | 14400 | < th | dose dependent | no | NA | NA |
| 508 | 21.55 | atmosphere | 1000.0 | 14400 | > th | dose independent | sin | 3 | NA |
| 535 | 21.55 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 13 | 23 |
| 605 | 21.59 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 23 |
| 608 | 21.59 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 18 | 10 |
| 674 | 21.62 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 18 | 8 |
| 782 | 21.65 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 799 | 21.66 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 808 | 21.66 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 15 | 13 |
| 834 | 21.68 | wind | 9.0 | 4320 | < th | dose independent | rect. | 16 | 11 |
| 854 | 21.69 | temperature | 30.0 | 270 | > th | dose independent | sin | 18 | NA |
| 860 | 21.69 | wind | 9.0 | 4320 | < th | dose independent | rect. | 16 | 9 |
| 947 | 21.71 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 14 | 18 |
| 972 | 21.72 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 16 | 16 |