BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0191700 Os02g0191700|009-138-C10
         (136 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0191700  Calcium-binding EF-hand domain containing protein   279   4e-76
Os10g0476600  Similar to Protein phosphatase 2A 62 kDa B\'\'...   248   7e-67

>Os02g0191700 Calcium-binding EF-hand domain containing protein
          Length = 136

 Score =  279 bits (714), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   DVDGNGILTHNELQFFFEEQLHRMECMAQEPVLFEDILCQLIDMIGPENETFFTLKDFRR 60
           DVDGNGILTHNELQFFFEEQLHRMECMAQEPVLFEDILCQLIDMIGPENETFFTLKDFRR
Sbjct: 1   DVDGNGILTHNELQFFFEEQLHRMECMAQEPVLFEDILCQLIDMIGPENETFFTLKDFRR 60

Query: 61  CKLSGHFFNILFNLNKFMAFEARDPFLIRQMREEPSLTDWDRFARREYIRLAMEEDGEDA 120
           CKLSGHFFNILFNLNKFMAFEARDPFLIRQMREEPSLTDWDRFARREYIRLAMEEDGEDA
Sbjct: 61  CKLSGHFFNILFNLNKFMAFEARDPFLIRQMREEPSLTDWDRFARREYIRLAMEEDGEDA 120

Query: 121 SNASGDVWDESLESPF 136
           SNASGDVWDESLESPF
Sbjct: 121 SNASGDVWDESLESPF 136



>Os10g0476600 Similar to Protein phosphatase 2A 62 kDa B\'\' regulatory subunit
           (Protein phosphatase 2A 62 kDa B regulatory subunit)
           (Protein phosphatase 2A alpha)
          Length = 541

 Score =  248 bits (634), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 114/136 (83%), Positives = 126/136 (92%)

Query: 1   DVDGNGILTHNELQFFFEEQLHRMECMAQEPVLFEDILCQLIDMIGPENETFFTLKDFRR 60
           D+DGNGILT  E+QFF+EEQLHRMECMAQEPVLFEDILCQ+IDMIGPENE +FTL+D +R
Sbjct: 406 DLDGNGILTTTEMQFFYEEQLHRMECMAQEPVLFEDILCQMIDMIGPENECYFTLRDLKR 465

Query: 61  CKLSGHFFNILFNLNKFMAFEARDPFLIRQMREEPSLTDWDRFARREYIRLAMEEDGEDA 120
           CKLSG+ FNILFNLNKFMAFE RDPFLIRQ RE P+LT+WDRFA REYIRL+MEEDGEDA
Sbjct: 466 CKLSGNIFNILFNLNKFMAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDGEDA 525

Query: 121 SNASGDVWDESLESPF 136
           SN SGDVWDESLE+PF
Sbjct: 526 SNGSGDVWDESLEAPF 541



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.325    0.141    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,736,781
Number of extensions: 179640
Number of successful extensions: 457
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 457
Number of HSP's successfully gapped: 2
Length of query: 136
Length of database: 17,035,801
Length adjustment: 90
Effective length of query: 46
Effective length of database: 12,336,541
Effective search space: 567480886
Effective search space used: 567480886
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 150 (62.4 bits)