BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0169900 Os02g0169900|AK070107
(364 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0169900 Inositol monophosphatase family protein 701 0.0
Os03g0587000 Similar to L-galactose-1-phosphate phosphatase 151 9e-37
Os07g0191000 Inositol monophosphatase family protein 78 9e-15
>Os02g0169900 Inositol monophosphatase family protein
Length = 364
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/364 (94%), Positives = 344/364 (94%)
Query: 1 MARYLLRPPTXXXXXXXXXSSHRRNGTTSPRGPVLGLRALASRAGKARPVMAVASEQPAA 60
MARYLLRPPT SSHRRNGTTSPRGPVLGLRALASRAGKARPVMAVASEQPAA
Sbjct: 1 MARYLLRPPTAAAAAAAAASSHRRNGTTSPRGPVLGLRALASRAGKARPVMAVASEQPAA 60
Query: 61 RGKCPKVAAPTTGPIPAAELLGVIQDAARAGAEVIMEAVNKPRNIHYKGVADLVTDTDKL 120
RGKCPKVAAPTTGPIPAAELLGVIQDAARAGAEVIMEAVNKPRNIHYKGVADLVTDTDKL
Sbjct: 61 RGKCPKVAAPTTGPIPAAELLGVIQDAARAGAEVIMEAVNKPRNIHYKGVADLVTDTDKL 120
Query: 121 SESVILEVVRKTFPDHXXXXXXXXXXXDALSEYLWCIDPLDGTTNFAHGYPSFSVSIGVL 180
SESVILEVVRKTFPDH DALSEYLWCIDPLDGTTNFAHGYPSFSVSIGVL
Sbjct: 121 SESVILEVVRKTFPDHLILGEEGGLIGDALSEYLWCIDPLDGTTNFAHGYPSFSVSIGVL 180
Query: 181 FRGKPAASTVVEFCGGPMCWSTRTVSASSGGGAYCNGQKIHVSKTDKVEQSLLVTGFGYE 240
FRGKPAASTVVEFCGGPMCWSTRTVSASSGGGAYCNGQKIHVSKTDKVEQSLLVTGFGYE
Sbjct: 181 FRGKPAASTVVEFCGGPMCWSTRTVSASSGGGAYCNGQKIHVSKTDKVEQSLLVTGFGYE 240
Query: 241 HDDAWVTNINLFKEYTDISRGVRRLGSAAADMSHVALGITEAYWEYRLKPWDMAAGVLIV 300
HDDAWVTNINLFKEYTDISRGVRRLGSAAADMSHVALGITEAYWEYRLKPWDMAAGVLIV
Sbjct: 241 HDDAWVTNINLFKEYTDISRGVRRLGSAAADMSHVALGITEAYWEYRLKPWDMAAGVLIV 300
Query: 301 EEAGGMVSRMDGGEFTVFDRSVLVSNGVVHDQLLDRIGPATEDLKKKGIDFSLWFKPDKY 360
EEAGGMVSRMDGGEFTVFDRSVLVSNGVVHDQLLDRIGPATEDLKKKGIDFSLWFKPDKY
Sbjct: 301 EEAGGMVSRMDGGEFTVFDRSVLVSNGVVHDQLLDRIGPATEDLKKKGIDFSLWFKPDKY 360
Query: 361 PTDF 364
PTDF
Sbjct: 361 PTDF 364
>Os03g0587000 Similar to L-galactose-1-phosphate phosphatase
Length = 267
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 134/266 (50%), Gaps = 12/266 (4%)
Query: 79 ELLGVIQDAARAGAEVIMEAVNKPRNIHYKGVADLVTDTDKLSESVILEVVRKTFPDHXX 138
+ L V DAA+ E+I + + +N+ +KG DLVT+TDK E +I +RK +PDH
Sbjct: 5 QFLAVAVDAAKNAGEIIRKGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLRKHYPDHKF 64
Query: 139 XXXXXXXXXDALSEY----LWCIDPLDGTTNFAHGYPSFSVSIGVLFRGKPAASTVVEFC 194
A ++ W +DPLDGTTNF HG+P VSIG+ P V
Sbjct: 65 IGEETSAALGATADLTDDPTWIVDPLDGTTNFVHGFPFVCVSIGLTVGKIPTVGVVYN-- 122
Query: 195 GGPMCWSTRTVSASSGGGAYCNGQKIHVSKTDKVEQSLLVTGFGYEHDDAWVTN-INLFK 253
P+ +A G GA+ NG I S +++ ++LLVT G + D A + + N
Sbjct: 123 --PI--MNELFTAVRGKGAFLNGSPIKTSSQNELVKALLVTEVGTKRDKATLDDTTNRIN 178
Query: 254 EYTDISRGVRRLGSAAADMSHVALGITEAYWEYRL-KPWDMAAGVLIVEEAGGMVSRMDG 312
+ R +R GS A +M VA G + +E PWD+AAG LI+ EAGG V G
Sbjct: 179 KLLFKIRSIRMCGSLALNMCGVACGRLDLCYEIGFGGPWDVAAGALILREAGGFVFDPSG 238
Query: 313 GEFTVFDRSVLVSNGVVHDQLLDRIG 338
GEF + R + SN + DQ + +G
Sbjct: 239 GEFDLMARRMAGSNSYLKDQFIKELG 264
>Os07g0191000 Inositol monophosphatase family protein
Length = 340
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 19/241 (7%)
Query: 80 LLGVIQDAARAGAEVIMEAVNKPRNIHYKGVADLVTDTDKLSESVILEVVRKTFPDHXXX 139
L+ V Q AA A EV+ + + I K VT D+ +E ++ V+ K+FP H
Sbjct: 80 LVEVAQRAADAAGEVLRKYFRQRVEIIDKEDQSPVTIADREAEEAMVSVILKSFPSHAVF 139
Query: 140 XXXXX-XXXDALSEYLWCIDPLDGTTNFAHGYPSFSVSIGVLFRGKPAASTVVEFCGGPM 198
+ ++Y+W +DP+DGT +F G P F I +L++GKP V+ P+
Sbjct: 140 GEENGWRCVEKSADYVWVLDPIDGTKSFITGKPLFGTLISLLYKGKP----VIGIIDQPI 195
Query: 199 CWSTRTVSASSGGGAYCNGQKIHVSKTDKVEQSLLVTG----FGYEHDDAWVTNINLFKE 254
R V G NGQ+I V + + Q+ L T F E +DA++ + K
Sbjct: 196 L-RERWVGV-DGMKTTLNGQEISVRPCNVLAQAYLYTTSPHLFAGEAEDAFIRVRDKVK- 252
Query: 255 YTDISRGVRRLGSAAADMSHVALGITEAYWEYRLKPWDMAAGVLIVEEAGGMVSRMDGGE 314
V G + +A G + E LKP+D + V ++E AGG ++ G +
Sbjct: 253 -------VPLYGCDCYAYALLASGFVDLVVESGLKPYDFLSLVPVIEGAGGSITDWKGNK 305
Query: 315 F 315
Sbjct: 306 L 306
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,735,464
Number of extensions: 537798
Number of successful extensions: 1599
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1596
Number of HSP's successfully gapped: 3
Length of query: 364
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 262
Effective length of database: 11,709,973
Effective search space: 3068012926
Effective search space used: 3068012926
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)