Os03g0587000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to L-galactose-1-phosphate phosphatase.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0587000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to L-galactose-1-phosphate phosphatase.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.52 | 0.427 | 10 | -2.7 | 0.29 | -0.536 | 0.451 | 2.63 | -1.09 | 3.6 | 9.999 | 1441 | -- | -- |
| 94.27 | 0.452 | 10 | -2.68 | 0.259 | -0.495 | 0.404 | -- | -1.08 | 3.83 | 9.953 | 1454 | -- | -- |
| 82.71 | 0.424 | 10 | -2.7 | 0.292 | -0.537 | -- | 2.66 | -1.09 | 2.65 | 9.999 | 1429 | -- | -- |
| 94.4 | 0.453 | 10 | -2.67 | 0.262 | -0.475 | -- | -- | -1.07 | 2.7 | 9.96 | 1473 | -- | -- |
| 87.52 | 0.436 | 10 | -2.7 | -- | -0.537 | -- | 2.66 | -1.09 | -- | 9.987 | 1428 | -- | -- |
| 101.52 | 0.472 | 10 | -2.7 | 0.259 | -- | 0.706 | -- | -0.999 | 4.33 | -- | -- | -- | -- |
| 102.18 | 0.473 | 10 | -2.7 | 0.277 | -- | -- | -- | -1 | 2.8 | -- | -- | -- | -- |
| 98.27 | 0.462 | 10 | -2.68 | -- | -0.506 | -- | -- | -1.08 | -- | 9.941 | 1426 | -- | -- |
| 259.08 | 0.75 | 10.1 | -- | 0.431 | -0.855 | -- | -- | -1.03 | 1.32 | 9.482 | 14333 | -- | -- |
| 106.63 | 0.483 | 10 | -2.69 | -- | -- | -- | -- | -0.996 | -- | -- | -- | -- | -- |
| 294.97 | 0.803 | 9.96 | -- | 0.224 | -- | -- | -- | -0.702 | 2.69 | -- | -- | -- | -- |
| 155.66 | 0.581 | 9.94 | -- | -- | -2.18 | -- | -- | -0.588 | -- | 9.79 | 47520 | -- | -- |
| 297.9 | 0.806 | 9.96 | -- | -- | -- | -- | -- | -0.697 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.75 | radiation | 40 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 5 | 73.24 | radiation | 40 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 6 | 73.25 | radiation | 40 | 14400 | < th | dose independent | rect. | 23 | 9 |
| 7 | 73.26 | radiation | 40 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 10 | 73.32 | radiation | 40 | 14400 | < th | dose independent | rect. | 21 | 11 |
| 16 | 74.23 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 18 | 75.87 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 21 | 76.42 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 23 | 76.82 | temperature | 15 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 30 | 77.02 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 14 |
| 31 | 77.05 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 37 | 77.18 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 40 | 77.26 | radiation | 20 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 75 | 77.44 | temperature | 20 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 76 | 77.45 | humidity | 60 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 78 | 77.48 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 81 | 77.52 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 14 | 7 |
| 84 | 77.56 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 92 | 77.61 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 12 | 10 |
| 95 | 77.63 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 98 | 77.63 | radiation | 30 | 14400 | > th | dose dependent | rect. | 16 | 16 |
| 100 | 77.65 | temperature | 15 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 101 | 77.65 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 14 | 6 |
| 109 | 77.73 | humidity | 60 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 111 | 77.76 | radiation | 30 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 140 | 77.90 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 146 | 77.95 | temperature | 15 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 147 | 77.95 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 12 | 6 |
| 156 | 78.00 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 201 | 78.10 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 203 | 78.10 | temperature | 15 | 43200 | < th | dose independent | rect. | 24 | 7 |
| 250 | 78.28 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 266 | 78.33 | wind | 1 | 43200 | < th | dose independent | rect. | 20 | 6 |
| 281 | 78.36 | wind | 1 | 43200 | > th | dose independent | rect. | 20 | 6 |
| 290 | 78.39 | temperature | 15 | 43200 | > th | dose independent | rect. | 24 | 7 |
| 291 | 78.39 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 293 | 78.40 | temperature | 15 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 324 | 78.46 | radiation | 40 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 327 | 78.47 | temperature | 15 | 43200 | < th | dose dependent | sin | 7 | NA |
| 343 | 78.48 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 345 | 78.48 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 4 |
| 356 | 78.50 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 4 |
| 396 | 78.55 | humidity | 50 | 43200 | > th | dose independent | rect. | 20 | 14 |
| 408 | 78.57 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 421 | 78.59 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 5 |
| 428 | 78.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 450 | 78.63 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 486 | 78.69 | radiation | 40 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 488 | 78.70 | radiation | 10 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 531 | 78.73 | radiation | 40 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 535 | 78.74 | temperature | 15 | 43200 | < th | dose independent | sin | 7 | NA |
| 552 | 78.75 | radiation | 40 | 43200 | < th | dose dependent | rect. | 21 | 11 |
| 571 | 78.78 | radiation | 1 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 579 | 78.78 | radiation | 1 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 602 | 78.82 | radiation | 10 | 1440 | < th | dose independent | sin | 15 | NA |
| 662 | 78.86 | atmosphere | 1015 | 43200 | > th | dose dependent | sin | 17 | NA |
| 669 | 78.87 | temperature | 15 | 43200 | > th | dose independent | sin | 7 | NA |
| 722 | 78.93 | radiation | 10 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 843 | 79.06 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 873 | 79.09 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 875 | 79.10 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 2 |
| 888 | 79.11 | radiation | 10 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 942 | 79.16 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 990 | 79.19 | radiation | 10 | 1440 | < th | dose independent | rect. | 14 | 16 |