Os02g0169900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Inositol monophosphatase family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0169900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Inositol monophosphatase family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.62 | 0.341 | 11.7 | -2.48 | 1.08 | 1.16 | 0.253 | -0.552 | -0.94 | 19 | 24.86 | 12 | -- | -- |
| 52.74 | 0.338 | 11.7 | -2.41 | 1.08 | 1.11 | 0.232 | -- | -0.928 | 19 | 24.72 | 12 | -- | -- |
| 52.78 | 0.338 | 11.7 | -2.48 | 1.07 | 1.17 | -- | -0.495 | -0.94 | 19 | 24.84 | 13 | -- | -- |
| 52.88 | 0.339 | 11.7 | -2.42 | 1.07 | 1.12 | -- | -- | -0.93 | 19 | 24.71 | 12 | -- | -- |
| 84.13 | 0.427 | 11.7 | -2.62 | -- | 1.72 | -- | -0.663 | -1.04 | -- | 24.2 | 323 | -- | -- |
| 71.21 | 0.396 | 11.7 | -2.24 | 1.35 | -- | 0.658 | -- | -0.823 | 17.8 | -- | -- | -- | -- |
| 72.27 | 0.398 | 11.7 | -2.24 | 1.35 | -- | -- | -- | -0.82 | 17.9 | -- | -- | -- | -- |
| 84.96 | 0.429 | 11.7 | -2.56 | -- | 1.69 | -- | -- | -1.02 | -- | 24.3 | 318 | -- | -- |
| 200.64 | 0.663 | 11.7 | -- | 1.25 | 0.523 | -- | -- | -0.597 | 18.2 | 25.3 | 11 | -- | -- |
| 166.65 | 0.603 | 11.7 | -2.28 | -- | -- | -- | -- | -0.852 | -- | -- | -- | -- | -- |
| 204.95 | 0.67 | 11.6 | -- | 1.38 | -- | -- | -- | -0.57 | 17.8 | -- | -- | -- | -- |
| 253.24 | 0.741 | 11.6 | -- | -- | 1.32 | -- | -- | -0.681 | -- | 24.69 | 305 | -- | -- |
| 304.34 | 0.814 | 11.6 | -- | -- | -- | -- | -- | -0.598 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.69 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 2 |
| 3 | 48.11 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 5 | 48.62 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 12 |
| 17 | 49.27 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 19 | 49.30 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 16 |
| 20 | 49.39 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 2 |
| 22 | 49.59 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 17 |
| 28 | 49.83 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 18 |
| 61 | 50.51 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 21 |
| 63 | 50.61 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 20 |
| 96 | 51.12 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 97 | 51.14 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 10 |
| 239 | 52.43 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 255 | 52.54 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 256 | 52.55 | temperature | 25 | 90 | > th | dose independent | rect. | 7 | 13 |
| 258 | 52.55 | temperature | 25 | 90 | > th | dose dependent | rect. | 16 | 23 |
| 262 | 52.60 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 23 |
| 273 | 52.65 | temperature | 30 | 10 | < th | dose dependent | sin | 22 | NA |
| 277 | 52.65 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 278 | 52.66 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 287 | 52.68 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 296 | 52.72 | temperature | 25 | 270 | > th | dose dependent | sin | 9 | NA |
| 307 | 52.77 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 309 | 52.78 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 2 |
| 312 | 52.79 | temperature | 10 | 720 | > th | dose dependent | sin | 3 | NA |
| 320 | 52.83 | temperature | 15 | 10 | > th | dose dependent | sin | 23 | NA |
| 331 | 52.86 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 333 | 52.87 | temperature | 25 | 90 | > th | dose dependent | sin | 3 | NA |
| 335 | 52.88 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 4 |
| 372 | 52.98 | temperature | 25 | 10 | > th | dose dependent | rect. | 16 | 23 |
| 384 | 53.03 | temperature | 25 | 270 | < th | dose independent | rect. | 2 | 18 |
| 388 | 53.04 | temperature | 30 | 720 | < th | dose dependent | sin | 3 | NA |
| 423 | 53.13 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 10 |
| 464 | 53.25 | temperature | 25 | 270 | > th | dose dependent | rect. | 16 | 21 |
| 479 | 53.30 | temperature | 25 | 720 | < th | dose independent | rect. | 4 | 8 |
| 489 | 53.32 | temperature | 25 | 720 | < th | dose independent | rect. | 6 | 6 |
| 501 | 53.35 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 504 | 53.36 | temperature | 25 | 10 | > th | dose dependent | sin | 1 | NA |
| 615 | 53.62 | temperature | 25 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 704 | 53.86 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 18 |
| 898 | 54.39 | temperature | 30 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 925 | 54.44 | temperature | 30 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 937 | 54.47 | temperature | 30 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 954 | 54.52 | temperature | 30 | 14400 | < th | dose independent | rect. | 20 | 13 |