BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0169800 Os02g0169800|AK065409
         (314 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0169800  Armadillo-like helical domain containing protein    542   e-154
Os02g0167700  Armadillo-like helical domain containing protein    496   e-141

>Os02g0169800 Armadillo-like helical domain containing protein
          Length = 314

 Score =  542 bits (1396), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 272/314 (86%), Positives = 272/314 (86%)

Query: 1   RLNKEGFKADQDIEPKLTTTVLQQLEDTSGEVSGLAVKCLAPLVKKVGEDSVVEMTNILC 60
           RLNKEGFKADQDIEPKLTTTVLQQLEDTSGEVSGLAVKCLAPLVKKVGEDSVVEMTNILC
Sbjct: 1   RLNKEGFKADQDIEPKLTTTVLQQLEDTSGEVSGLAVKCLAPLVKKVGEDSVVEMTNILC 60

Query: 61  DKLLNGKDQHRDTASIALKTIIAEVTTTTLAEKILVSLAPQLIKGATAGKSAEVKCECLD 120
           DKLLNGKDQHRDTASIALKTIIAEVTTTTLAEKILVSLAPQLIKGATAGKSAEVKCECLD
Sbjct: 61  DKLLNGKDQHRDTASIALKTIIAEVTTTTLAEKILVSLAPQLIKGATAGKSAEVKCECLD 120

Query: 121 ILGDVLHRFGNLITKDHDCMXXXXXXXXXXXXXXVRKKSISCIXXXXXXXXXXXXXKATF 180
           ILGDVLHRFGNLITKDHDCM              VRKKSISCI             KATF
Sbjct: 121 ILGDVLHRFGNLITKDHDCMLTALLSQLSSNQASVRKKSISCIASLAACLSDDLLAKATF 180

Query: 181 EVVQLLKNRSAKSEIARTNIQMIGALSRSVGYRFGPHLAEVVPLLINYCTSASENDEELC 240
           EVVQLLKNRSAKSEIARTNIQMIGALSRSVGYRFGPHLAEVVPLLINYCTSASENDEELC
Sbjct: 181 EVVQLLKNRSAKSEIARTNIQMIGALSRSVGYRFGPHLAEVVPLLINYCTSASENDEELC 240

Query: 241 EYSLQALESFMLRCPRDISPYCESILNLALEYISYDPNFTDSMXXXXXXXXXXXXXXXYL 300
           EYSLQALESFMLRCPRDISPYCESILNLALEYISYDPNFTDSM               YL
Sbjct: 241 EYSLQALESFMLRCPRDISPYCESILNLALEYISYDPNFTDSMEEDTDDEAQDEEDDEYL 300

Query: 301 IDALTVIDKCYLFT 314
           IDALTVIDKCYLFT
Sbjct: 301 IDALTVIDKCYLFT 314



>Os02g0167700 Armadillo-like helical domain containing protein
          Length = 1218

 Score =  496 bits (1278), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 246/282 (87%), Positives = 248/282 (87%)

Query: 2   LNKEGFKADQDIEPKLTTTVLQQLEDTSGEVSGLAVKCLAPLVKKVGEDSVVEMTNILCD 61
           LNKEGFKADQDIEPKLTTTVLQQLED SG+VSGLAVKCLAPLVKKVGED VVEMTNILCD
Sbjct: 32  LNKEGFKADQDIEPKLTTTVLQQLEDASGDVSGLAVKCLAPLVKKVGEDRVVEMTNILCD 91

Query: 62  KLLNGKDQHRDTASIALKTIIAEVTTTTLAEKILVSLAPQLIKGATAGKSAEVKCECLDI 121
           KLLNGKDQHRDTASIALKTII EVTTT+LAEKILVSLAPQLIKGATAGKSAEVKCECLDI
Sbjct: 92  KLLNGKDQHRDTASIALKTIIVEVTTTSLAEKILVSLAPQLIKGATAGKSAEVKCECLDI 151

Query: 122 LGDVLHRFGNLITKDHDCMXXXXXXXXXXXXXXVRKKSISCIXXXXXXXXXXXXXKATFE 181
           LGDVLHRFGNLITKDHD M              VRKKSISCI             KATFE
Sbjct: 152 LGDVLHRFGNLITKDHDSMLTALLSQLSSNQASVRKKSISCIASLAACLSDDLLAKATFE 211

Query: 182 VVQLLKNRSAKSEIARTNIQMIGALSRSVGYRFGPHLAEVVPLLINYCTSASENDEELCE 241
           VVQLLKNRSAKSEIARTNIQMIGALSRSVGYRFGPHLAE VPLLINYCTSASENDEEL E
Sbjct: 212 VVQLLKNRSAKSEIARTNIQMIGALSRSVGYRFGPHLAEAVPLLINYCTSASENDEELRE 271

Query: 242 YSLQALESFMLRCPRDISPYCESILNLALEYISYDPNFTDSM 283
           YSLQALESFMLRCPRDISPYCE ILNLALEYISYDPNFTDSM
Sbjct: 272 YSLQALESFMLRCPRDISPYCEGILNLALEYISYDPNFTDSM 313



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.134    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,723,272
Number of extensions: 255041
Number of successful extensions: 617
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 617
Number of HSP's successfully gapped: 2
Length of query: 314
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 213
Effective length of database: 11,762,187
Effective search space: 2505345831
Effective search space used: 2505345831
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)