BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0168300 Os02g0168300|AK103301
         (389 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0168300  Hypothetical protein                                808   0.0  
Os06g0670100  Hypothetical protein                                181   8e-46
Os03g0777100  Conserved hypothetical protein                      108   5e-24

>Os02g0168300 Hypothetical protein
          Length = 389

 Score =  808 bits (2088), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/389 (100%), Positives = 389/389 (100%)

Query: 1   MGCFLSCFRGAGSDPAGSLRDPLVRESRIGEAFLDDETKVEASGTLDGDRGNGGSVDEEL 60
           MGCFLSCFRGAGSDPAGSLRDPLVRESRIGEAFLDDETKVEASGTLDGDRGNGGSVDEEL
Sbjct: 1   MGCFLSCFRGAGSDPAGSLRDPLVRESRIGEAFLDDETKVEASGTLDGDRGNGGSVDEEL 60

Query: 61  WREANYLKSCGAIGETPPEMLKGSNQITEEETNGELKGAAVSEENLSEGFNCDEHSALKH 120
           WREANYLKSCGAIGETPPEMLKGSNQITEEETNGELKGAAVSEENLSEGFNCDEHSALKH
Sbjct: 61  WREANYLKSCGAIGETPPEMLKGSNQITEEETNGELKGAAVSEENLSEGFNCDEHSALKH 120

Query: 121 EQSDSPHPTPLVLRGDMQTPGTLNTAYKESLRSGKRARTNKQFIYPVLRPIENKLQWMEL 180
           EQSDSPHPTPLVLRGDMQTPGTLNTAYKESLRSGKRARTNKQFIYPVLRPIENKLQWMEL
Sbjct: 121 EQSDSPHPTPLVLRGDMQTPGTLNTAYKESLRSGKRARTNKQFIYPVLRPIENKLQWMEL 180

Query: 181 RDDSSPILSFNPPKRRYLSTDCSAKPQESITNSMATQTARITPASFSFHDITAGQDQGVI 240
           RDDSSPILSFNPPKRRYLSTDCSAKPQESITNSMATQTARITPASFSFHDITAGQDQGVI
Sbjct: 181 RDDSSPILSFNPPKRRYLSTDCSAKPQESITNSMATQTARITPASFSFHDITAGQDQGVI 240

Query: 241 SPEEHKSENDSRKLLDDADQLKYNADSERKGVASLSCWLKPPSSAGGSQSDTEGKVVKQR 300
           SPEEHKSENDSRKLLDDADQLKYNADSERKGVASLSCWLKPPSSAGGSQSDTEGKVVKQR
Sbjct: 241 SPEEHKSENDSRKLLDDADQLKYNADSERKGVASLSCWLKPPSSAGGSQSDTEGKVVKQR 300

Query: 301 CYENSVFTDLPIFTASGLNWDNDKPTPVLPKVWDGNGIPNTTTKYKEDQKVSWHATPFEE 360
           CYENSVFTDLPIFTASGLNWDNDKPTPVLPKVWDGNGIPNTTTKYKEDQKVSWHATPFEE
Sbjct: 301 CYENSVFTDLPIFTASGLNWDNDKPTPVLPKVWDGNGIPNTTTKYKEDQKVSWHATPFEE 360

Query: 361 RLMKVLSDEKPHHQRKISGKLIQLDEETN 389
           RLMKVLSDEKPHHQRKISGKLIQLDEETN
Sbjct: 361 RLMKVLSDEKPHHQRKISGKLIQLDEETN 389



>Os06g0670100 Hypothetical protein
          Length = 413

 Score =  181 bits (459), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 154/440 (35%), Positives = 197/440 (44%), Gaps = 99/440 (22%)

Query: 1   MGCFLSCF------RGAGSDPAGSLRDPLVRESRIGEAFLDD-ETKVEASGTLDGDRGNG 53
           +G FLS F      R     P    RD L  + R+GE   DD E  +   G    D  + 
Sbjct: 21  VGFFLSFFGPHPRDRDRDDSPGSGRRDSLAHKDRLGELLSDDDELGLGGRGGSHEDLADD 80

Query: 54  GSVDEELWREANYLKSCGAIGETPPEMLKGSNQITEEE--------TNG-ELKGAAVSEE 104
              DEEL  EAN+LK CG + ETP E+   S QI  E         TN   ++     E 
Sbjct: 81  CGSDEELRSEANFLKLCGTLFETPAELHNISYQINMESYIEHDKIPTNVLAVEATPAFES 140

Query: 105 NLSEGFNCDEHSALKHE-----------------------------------QSDSPHPT 129
             S GF   E   L  +                                    SDSP  T
Sbjct: 141 KSSGGFEYGEDHILTPQLNTEDTEHLPLVKSVYQSAIRGNSPFQNIKSINDGSSDSPFHT 200

Query: 130 PLVLRGDMQTPGTLNTAYKESLRSGKRARTNKQFIYPVLRPIENKLQWMELRDDSSPILS 189
           PLVLR DMQTP T+ T++K S  SGKR RT KQF YP+ RP ENKLQ M+L D       
Sbjct: 201 PLVLRDDMQTPRTVYTSHKGS--SGKRVRTRKQFAYPIFRPTENKLQKMQLSD------- 251

Query: 190 FNPPKRRYLSTDCSAKPQESITNSMATQTARITPASFSFHDITAGQDQGVISPEEHKSEN 249
                        SAK  + I++    +   +  + F                E  K + 
Sbjct: 252 -------------SAKMTQQISSDSVVKGESLNSSHFPL--------------EVSKYQL 284

Query: 250 DSRKLLDDADQLKYNADSERKGVASLSCWLKPPSSAGGSQSDTEGKVVKQRCYENSVFTD 309
           D ++LLD  ++ K N+D E   V SLS WLK  SS  G+          Q   EN++  +
Sbjct: 285 DRQRLLDAGERSKSNSD-ENIEVCSLSRWLK--SSPAGN--------TNQMYDENNLIEE 333

Query: 310 LPIFTASGLNWDNDKPTPVLPKVWDGNGIPNTTTKYKEDQKVSWHATPFEERLMKVLSDE 369
              F  S  N D D  TP L K  D + IPNT+ KY EDQ VSWH+TPFEERL+KVLSDE
Sbjct: 334 GHAFMTSEDNVDVDNHTPRLSKARDCHCIPNTSRKYGEDQHVSWHSTPFEERLIKVLSDE 393

Query: 370 K-PHHQRKISGKLIQLDEET 388
           + P  ++ + G+L+ L+E  
Sbjct: 394 EVPPTRKLVPGRLLYLEERV 413



>Os03g0777100 Conserved hypothetical protein
          Length = 347

 Score =  108 bits (271), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 130/291 (44%), Gaps = 36/291 (12%)

Query: 107 SEGFNCDEHSALKHEQSDSPHPTPLVLRGDMQTPGTLNTAYKESLRSGKRARTNKQFIYP 166
           S  F C +   L   +S  P  TP     ++QTP T +   +E LR+    RT  +  Y 
Sbjct: 56  SPSFTCRDDINLVESKS-LPISTPSEATAEIQTPATTHAPDQEELRNENNTRTCSEHTYE 114

Query: 167 VLRPIENKLQWMELRDDSS-PILSFNPPKRRYLSTDCSAKPQESITNSMATQTARITPAS 225
            +  +E      +LR +S  P +S      +Y   D     + SI+N  +          
Sbjct: 115 AVSSVEASGSCEKLRLESCQPNIS--DEDFKYAKNDSLVSVELSISNECSL--------- 163

Query: 226 FSFHDITAGQDQGVISPEEHKSENDSRKLLDDADQLKYNADSERKGVA----------SL 275
             F        +G +S    + EN S + ++   + +    S RK V           SL
Sbjct: 164 --FQ-----SSEGSVSSCNKRRENSSTESVEKCLKSEPLVHSSRKKVLKGNDSEVEFPSL 216

Query: 276 SCWLKPPSSAGGSQSDTEGKVVKQRCYE-NSVFTDLPIFTASGLNWDNDKPTPVLPKVWD 334
           S WLKPP      +   +  +   R +   S   D PI      +W + +P    PK WD
Sbjct: 217 SQWLKPP----NPKVFRDEPLTSDRSHSAKSSEEDRPIIGLVAAHWRDTEPDTFTPKWWD 272

Query: 335 GNGIPNTTTKYKEDQKVSWHATPFEERLMKVLSDEKPHHQRKI-SGKLIQL 384
           GNGIPN+T KYKEDQKVSWHATPFEERL K LSDEK   QRK  SG   QL
Sbjct: 273 GNGIPNSTNKYKEDQKVSWHATPFEERLEKALSDEKLLSQRKCSSGNTSQL 323



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.310    0.129    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,829,317
Number of extensions: 743994
Number of successful extensions: 1559
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1554
Number of HSP's successfully gapped: 3
Length of query: 389
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 286
Effective length of database: 11,657,759
Effective search space: 3334119074
Effective search space used: 3334119074
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 157 (65.1 bits)