Os02g0168300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0168300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 211.85 | 0.684 | 3.41 | -0.439 | 0.996 | -3.21 | -0.527 | -11.8 | 0.161 | 23 | 18.14 | 4445 | -- | -- |
| 222.02 | 0.694 | 3.59 | -0.506 | 1.09 | 2.83 | -1.59 | -- | 0.0834 | 24 | 15.53 | 3907 | -- | -- |
| 212.96 | 0.68 | 3.42 | -0.431 | 0.998 | -3.13 | -- | -11.6 | 0.158 | 23 | 18.02 | 4370 | -- | -- |
| 216.58 | 0.685 | 3.63 | -0.252 | 1.04 | 3.03 | -- | -- | 0.148 | 23.1 | 15.54 | 3754 | -- | -- |
| 275.12 | 0.773 | 3.39 | -0.398 | -- | -3.12 | -- | -11.5 | 0.17 | -- | 18.14 | 4446 | -- | -- |
| 256.99 | 0.752 | 3.67 | -0.904 | 0.988 | -- | -0.506 | -- | -0.0229 | 22.9 | -- | -- | -- | -- |
| 258.07 | 0.752 | 3.67 | -0.883 | 0.991 | -- | -- | -- | -0.0212 | 22.9 | -- | -- | -- | -- |
| 282.01 | 0.782 | 3.61 | -0.221 | -- | 2.53 | -- | -- | 0.162 | -- | 16.14 | 4139 | -- | -- |
| 217.66 | 0.687 | 3.62 | -- | 1.03 | 3.17 | -- | -- | 0.183 | 23 | 15.75 | 3897 | -- | -- |
| 319.09 | 0.835 | 3.64 | -0.862 | -- | -- | -- | -- | -0.0142 | -- | -- | -- | -- | -- |
| 278.64 | 0.781 | 3.65 | -- | 0.984 | -- | -- | -- | 0.0772 | 22.9 | -- | -- | -- | -- |
| 282.96 | 0.783 | 3.6 | -- | -- | 2.69 | -- | -- | 0.187 | -- | 16.24 | 4185 | -- | -- |
| 338.68 | 0.859 | 3.62 | -- | -- | -- | -- | -- | 0.0814 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 206.78 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 12 | 6 |
| 3 | 206.90 | temperature | 20.0 | 270 | < th | dose independent | sin | 22 | NA |
| 4 | 207.21 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 16 |
| 5 | 207.38 | temperature | 20.0 | 270 | < th | dose independent | rect. | 12 | 6 |
| 13 | 208.90 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 11 | 9 |
| 18 | 209.46 | temperature | 25.0 | 720 | < th | dose dependent | sin | 22 | NA |
| 24 | 210.03 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 10 | 3 |
| 25 | 210.09 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 9 | 4 |
| 28 | 210.16 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 11 | 9 |
| 29 | 210.19 | temperature | 20.0 | 720 | < th | dose independent | rect. | 6 | 15 |
| 31 | 210.21 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 33 | 210.25 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 13 | 3 |
| 47 | 210.55 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 55 | 210.70 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 56 | 210.70 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 9 | 8 |
| 62 | 210.78 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 82 | 210.92 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 15 |
| 84 | 210.99 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 7 | 6 |
| 97 | 211.15 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 7 | 10 |
| 104 | 211.17 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 9 | 8 |
| 106 | 211.21 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 115 | 211.26 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 5 | 11 |
| 116 | 211.31 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 13 | 3 |
| 127 | 211.44 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 129 | 211.47 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 169 | 211.84 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 11 | 6 |
| 174 | 211.91 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 14 |
| 179 | 211.97 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 180 | 211.97 | temperature | 20.0 | 4320 | < th | dose dependent | sin | 1 | NA |
| 181 | 211.97 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 8 | 2 |
| 195 | 212.16 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 15 | 2 |
| 202 | 212.20 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 13 | 6 |
| 209 | 212.25 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 8 | 2 |
| 273 | 212.49 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 295 | 212.65 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 296 | 212.65 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 301 | 212.74 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 302 | 212.74 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 22 |
| 314 | 212.82 | temperature | 20.0 | 720 | > th | dose independent | rect. | 8 | 9 |
| 332 | 212.92 | humidity | 90.0 | 90 | > th | dose independent | rect. | 11 | 8 |
| 404 | 213.35 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 470 | 213.52 | temperature | 20.0 | 720 | < th | dose independent | rect. | 7 | 10 |
| 474 | 213.53 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 510 | 213.80 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 513 | 213.80 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 538 | 213.94 | temperature | 15.0 | 4320 | < th | dose independent | sin | 0 | NA |
| 553 | 214.01 | temperature | 15.0 | 4320 | > th | dose independent | sin | 0 | NA |
| 566 | 214.07 | temperature | 20.0 | 270 | < th | dose independent | rect. | 1 | 22 |
| 612 | 214.32 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 633 | 214.42 | wind | 9.0 | 43200 | > th | dose dependent | sin | 11 | NA |
| 656 | 214.52 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 660 | 214.55 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 2 | 15 |
| 671 | 214.57 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 16 |
| 702 | 214.69 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 8 | 20 |
| 714 | 214.73 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 6 | 20 |
| 727 | 214.76 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 735 | 214.76 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 9 | 7 |
| 742 | 214.78 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 10 | 22 |
| 753 | 214.81 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 2 | 15 |
| 755 | 214.82 | temperature | 20.0 | 270 | < th | dose independent | rect. | 4 | 22 |
| 793 | 214.88 | temperature | 15.0 | 14400 | < th | dose independent | sin | 18 | NA |
| 805 | 214.90 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 5 | 22 |
| 886 | 215.07 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 15 | 10 |
| 892 | 215.08 | temperature | 20.0 | 4320 | < th | dose dependent | no | NA | NA |
| 913 | 215.12 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 922 | 215.14 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 12 | 14 |
| 955 | 215.19 | temperature | 25.0 | 10 | < th | dose dependent | sin | 19 | NA |
| 993 | 215.24 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 11 | 23 |