Os03g0777100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0777100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 170.27 | 0.613 | 8.5 | 1.23 | 2.97 | 1.35 | 0.599 | 0.726 | 0.52 | 21.8 | 82 | 713 | -- | -- |
| 171.24 | 0.609 | 8.5 | 1.27 | 2.97 | 1.36 | 0.312 | -- | 0.527 | 21.8 | 82.52 | 712 | -- | -- |
| 171.31 | 0.61 | 8.5 | 1.24 | 2.96 | 1.35 | -- | 0.352 | 0.523 | 21.8 | 82 | 712 | -- | -- |
| 171.6 | 0.61 | 8.5 | 1.26 | 2.97 | 1.36 | -- | -- | 0.526 | 21.8 | 82.46 | 712 | -- | -- |
| 399.77 | 0.936 | 8.43 | 1.28 | -- | 1.02 | -- | 0.476 | 0.474 | -- | 82 | 712 | -- | -- |
| 212.82 | 0.684 | 8.48 | 1.29 | 2.24 | -- | 0.293 | -- | 0.475 | 22.3 | -- | -- | -- | -- |
| 213.17 | 0.684 | 8.49 | 1.28 | 2.24 | -- | -- | -- | 0.474 | 22.3 | -- | -- | -- | -- |
| 401.31 | 0.937 | 8.43 | 1.29 | -- | 1.02 | -- | -- | 0.475 | -- | 82 | 712 | -- | -- |
| 212.47 | 0.679 | 8.52 | -- | 2.96 | 1.34 | -- | -- | 0.43 | 22 | 84 | 734 | -- | -- |
| 519.23 | 1.06 | 8.43 | 1.31 | -- | -- | -- | -- | 0.481 | -- | -- | -- | -- | -- |
| 256.14 | 0.749 | 8.52 | -- | 2.25 | -- | -- | -- | 0.332 | 22.4 | -- | -- | -- | -- |
| 445.48 | 0.986 | 8.46 | -- | -- | 1.03 | -- | -- | 0.331 | -- | 82 | 712 | -- | -- |
| 564.65 | 1.11 | 8.46 | -- | -- | -- | -- | -- | 0.335 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 167.31 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 19 | 1 |
| 2 | 168.38 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 6 | 168.97 | humidity | 80.0 | 720 | > th | dose independent | rect. | 1 | 21 |
| 12 | 169.87 | humidity | 80.0 | 720 | < th | dose independent | rect. | 13 | 9 |
| 17 | 170.14 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 19 | 170.15 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 1 | 21 |
| 20 | 170.16 | humidity | 80.0 | 720 | > th | dose independent | rect. | 10 | 12 |
| 28 | 170.43 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 9 | 20 |
| 33 | 170.54 | humidity | 80.0 | 720 | < th | dose independent | rect. | 11 | 21 |
| 34 | 170.54 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 10 | 11 |
| 48 | 170.76 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 9 | 13 |
| 51 | 170.83 | humidity | 80.0 | 720 | < th | dose independent | rect. | 13 | 19 |
| 66 | 171.01 | humidity | 80.0 | 720 | < th | dose independent | sin | 18 | NA |
| 67 | 171.02 | humidity | 80.0 | 720 | > th | dose independent | rect. | 7 | 15 |
| 69 | 171.03 | humidity | 90.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 75 | 171.09 | humidity | 70.0 | 720 | > th | dose dependent | sin | 19 | NA |
| 91 | 171.32 | humidity | 80.0 | 720 | > th | dose independent | rect. | 17 | 4 |
| 101 | 171.44 | humidity | 80.0 | 720 | > th | dose independent | rect. | 10 | 22 |
| 112 | 171.58 | humidity | 80.0 | 720 | > th | dose independent | rect. | 10 | 19 |
| 120 | 171.65 | humidity | 80.0 | 720 | > th | dose independent | rect. | 15 | 6 |
| 131 | 171.78 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 13 |
| 142 | 171.92 | humidity | 80.0 | 720 | > th | dose independent | sin | 19 | NA |
| 143 | 171.93 | humidity | 80.0 | 720 | > th | dose independent | rect. | 7 | 22 |
| 182 | 172.26 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 199 | 172.39 | humidity | 70.0 | 720 | > th | dose dependent | no | NA | NA |
| 217 | 172.48 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 5 | 17 |
| 226 | 172.55 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 233 | 172.62 | humidity | 80.0 | 720 | > th | dose independent | rect. | 13 | 9 |
| 235 | 172.62 | humidity | 80.0 | 720 | > th | dose independent | rect. | 15 | 23 |
| 236 | 172.63 | humidity | 80.0 | 720 | > th | dose independent | rect. | 13 | 23 |
| 243 | 172.70 | humidity | 80.0 | 720 | > th | dose independent | no | NA | NA |
| 246 | 172.70 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 272 | 172.92 | humidity | 80.0 | 720 | < th | dose independent | rect. | 3 | 19 |
| 287 | 173.02 | humidity | 80.0 | 720 | > th | dose independent | rect. | 19 | 1 |
| 292 | 173.05 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 20 |
| 598 | 174.72 | humidity | 80.0 | 720 | > th | dose independent | rect. | 13 | 16 |
| 644 | 174.89 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 677 | 175.09 | humidity | 80.0 | 720 | < th | dose independent | no | NA | NA |
| 734 | 175.36 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 837 | 175.92 | humidity | 80.0 | 720 | < th | dose independent | rect. | 17 | 23 |
| 854 | 176.04 | humidity | 80.0 | 720 | < th | dose independent | rect. | 19 | 23 |
| 933 | 176.62 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |