BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0134000 Os02g0134000|Os02g0134000
         (218 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0134000  Dephospho-CoA kinase family protein                 442   e-124
Os07g0179400  Cytidyltransferase-related domain containing p...   186   8e-48

>Os02g0134000 Dephospho-CoA kinase family protein
          Length = 218

 Score =  442 bits (1137), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 218/218 (100%), Positives = 218/218 (100%)

Query: 1   MVVLVEASPRGGAGDHPASCELDAGGDVGSGGRQYAAVVVGGTFDRLHQGHHLFLKAAAE 60
           MVVLVEASPRGGAGDHPASCELDAGGDVGSGGRQYAAVVVGGTFDRLHQGHHLFLKAAAE
Sbjct: 1   MVVLVEASPRGGAGDHPASCELDAGGDVGSGGRQYAAVVVGGTFDRLHQGHHLFLKAAAE 60

Query: 61  FARERIVIGICDGPMLAKKQASRMYAYLIQPIEKRMENVKEYIKAMIASYHFQSIKPDLE 120
           FARERIVIGICDGPMLAKKQASRMYAYLIQPIEKRMENVKEYIKAMIASYHFQSIKPDLE
Sbjct: 61  FARERIVIGICDGPMLAKKQASRMYAYLIQPIEKRMENVKEYIKAMIASYHFQSIKPDLE 120

Query: 121 VHVEPIVDPFGPSIVDEALEAIIVSSKETLPGGLAVNRKRAERGLAQLEIEVVELVPEKS 180
           VHVEPIVDPFGPSIVDEALEAIIVSSKETLPGGLAVNRKRAERGLAQLEIEVVELVPEKS
Sbjct: 121 VHVEPIVDPFGPSIVDEALEAIIVSSKETLPGGLAVNRKRAERGLAQLEIEVVELVPEKS 180

Query: 181 TGNKISSTAFRKKEAERELHKQQQEAPHEQAVELECRI 218
           TGNKISSTAFRKKEAERELHKQQQEAPHEQAVELECRI
Sbjct: 181 TGNKISSTAFRKKEAERELHKQQQEAPHEQAVELECRI 218



>Os07g0179400 Cytidyltransferase-related domain containing protein
          Length = 187

 Score =  186 bits (473), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 100/178 (56%), Positives = 129/178 (72%), Gaps = 17/178 (9%)

Query: 35  YAAVVVGGTFDRLHQGHHLFLKAAAEFARERIVIGICDGPMLAKKQASRMYAYLIQPIEK 94
           Y +VV+GGTFDRLH GH   LKA+A+ AR+RIV+G+C GPMLAKK+    YA LI+P+EK
Sbjct: 27  YGSVVLGGTFDRLHDGHRRLLKASADLARDRIVVGVCTGPMLAKKE----YAELIEPVEK 82

Query: 95  RMENVKEYIKAMIASYHFQSIKPDLEVHVEPIVDPFGPSIVDEALEAIIVSSKETLPGGL 154
           RM+ V++YIK         S+KP+L V VEPI DP+GPSI+D+ L+AIIV SKETL GG 
Sbjct: 83  RMKAVEDYIK---------SVKPELVVQVEPIEDPYGPSIIDDKLDAIIV-SKETLNGGF 132

Query: 155 AVNRKRAERGLAQLEIEVVELVPEKSTGNKISSTAFRKKEAERELHKQQQEAPHEQAV 212
           AVNRKR E+GL  L++EVV+L+   + G K+SS+A RK EAE+     QQE    + V
Sbjct: 133 AVNRKREEKGLPLLKVEVVDLLSGGAEGEKLSSSALRKLEAEK---ANQQEGAASKGV 187



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.317    0.134    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,935,386
Number of extensions: 362505
Number of successful extensions: 1306
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1303
Number of HSP's successfully gapped: 2
Length of query: 218
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 121
Effective length of database: 11,971,043
Effective search space: 1448496203
Effective search space used: 1448496203
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 154 (63.9 bits)