BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0133900 Os02g0133900|AK107180
         (380 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0133900  Protein of unknown function DUF829, eukaryotic...   689   0.0  
Os06g0730300  Protein of unknown function DUF829, eukaryotic...   271   6e-73

>Os02g0133900 Protein of unknown function DUF829, eukaryotic family protein
          Length = 380

 Score =  689 bits (1777), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/362 (96%), Positives = 349/362 (96%)

Query: 19  TTFRHAPTVSSSLSFPPNPHHRPSLRGRAGIXXXXXXXXXXXXXPHGASAPFNLFPPDSD 78
           TTFRHAPTVSSSLSFPPNPHHRPSLRGRAGI             PHGASAPFNLFPPDSD
Sbjct: 19  TTFRHAPTVSSSLSFPPNPHHRPSLRGRAGISFSSTSISLPSGSPHGASAPFNLFPPDSD 78

Query: 79  PFIQWDPPPPDAASPLGAGAAGREAPGDLTLVVLLGWLGARQKHLRRYADLYRDRGVGSV 138
           PFIQWDPPPPDAASPLGAGAAGREAPGDLTLVVLLGWLGARQKHLRRYADLYRDRGVGSV
Sbjct: 79  PFIQWDPPPPDAASPLGAGAAGREAPGDLTLVVLLGWLGARQKHLRRYADLYRDRGVGSV 138

Query: 139 RFVVPVRELLGLDLGRRVERRVADLAAEIAAWCDADHRRTLLFHTFSNTGWLAYGAILEN 198
           RFVVPVRELLGLDLGRRVERRVADLAAEIAAWCDADHRRTLLFHTFSNTGWLAYGAILEN
Sbjct: 139 RFVVPVRELLGLDLGRRVERRVADLAAEIAAWCDADHRRTLLFHTFSNTGWLAYGAILEN 198

Query: 199 LQSRADIIERIRGCIVDSAPVLEIRPEVWAAGFSAAMLKKSSSMTGPSVESPDGYTSNGT 258
           LQSRADIIERIRGCIVDSAPVLEIRPEVWAAGFSAAMLKKSSSMTGPSVESPDGYTSNGT
Sbjct: 199 LQSRADIIERIRGCIVDSAPVLEIRPEVWAAGFSAAMLKKSSSMTGPSVESPDGYTSNGT 258

Query: 259 LNNLSSDVTRPTWGENILLSTLQKFFEIVLHLPDVNKRLEKVHSVLSEKQPTCPQFYLYS 318
           LNNLSSDVTRPTWGENILLSTLQKFFEIVLHLPDVNKRLEKVHSVLSEKQPTCPQFYLYS
Sbjct: 259 LNNLSSDVTRPTWGENILLSTLQKFFEIVLHLPDVNKRLEKVHSVLSEKQPTCPQFYLYS 318

Query: 319 SADRVIPAECVERFIDMQKSLGQSVFAHNFVSSPHVDHYRSFPHVYAAKIDEFLKICSIA 378
           SADRVIPAECVERFIDMQKSLGQSVFAHNFVSSPHVDHYRSFPHVYAAKIDEFLKICSIA
Sbjct: 319 SADRVIPAECVERFIDMQKSLGQSVFAHNFVSSPHVDHYRSFPHVYAAKIDEFLKICSIA 378

Query: 379 RV 380
           RV
Sbjct: 379 RV 380



>Os06g0730300 Protein of unknown function DUF829, eukaryotic family protein
          Length = 423

 Score =  271 bits (693), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 133/274 (48%), Positives = 189/274 (68%), Gaps = 5/274 (1%)

Query: 108 TLVVLLGWLGARQKHLRRYADLYRDRGVGSVRFVVPVRELLGLDLGRRVERRVADLAAEI 167
           T+VVLLGWLG+RQKHL+RYAD Y  RG  +V F +P+ +++  ++G + E+ V  L+  +
Sbjct: 141 TVVVLLGWLGSRQKHLKRYADWYTSRGYHAVTFTLPMSDIVSYNVGGKAEKNVEMLSEHL 200

Query: 168 AAWCDADHRRTLLFHTFSNTGWLAYGAILENLQSRAD--IIERIRGCIVDSAPVLEIRPE 225
           A W   +  + ++FHTFSNTGWL YG ILENLQ R D   +++I+GC+VDSAPV     +
Sbjct: 201 ADWVSEEDGKKIVFHTFSNTGWLCYGVILENLQ-RQDPSAMDKIKGCVVDSAPVAVPDSQ 259

Query: 226 VWAAGFSAAMLKKSSSMTGPSVESPDGYTSNGTLNNLSSDVTRPTWGENILLSTLQKFFE 285
           VWA+GFSAA++KK S +    V+ P+    +  +   + D  +P   E ILLS L+K F+
Sbjct: 260 VWASGFSAAIMKKHS-VAAKGVK-PNDARPDVLVVESNKDHPKPAVSEAILLSALEKLFD 317

Query: 286 IVLHLPDVNKRLEKVHSVLSEKQPTCPQFYLYSSADRVIPAECVERFIDMQKSLGQSVFA 345
           +VL+ P +N++L  V  +LS KQP CPQ Y+YSSADRVIPA+ VE F++ Q+  G  V A
Sbjct: 318 VVLNYPAINRKLSGVMELLSSKQPKCPQLYIYSSADRVIPAKSVESFVESQRRAGHEVRA 377

Query: 346 HNFVSSPHVDHYRSFPHVYAAKIDEFLKICSIAR 379
            +FVSSPHVDHYRS P +Y +++ EF++ C +AR
Sbjct: 378 CDFVSSPHVDHYRSNPELYTSQLTEFMEDCVLAR 411



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.321    0.137    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,674,226
Number of extensions: 623834
Number of successful extensions: 2579
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2577
Number of HSP's successfully gapped: 2
Length of query: 380
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 277
Effective length of database: 11,657,759
Effective search space: 3229199243
Effective search space used: 3229199243
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)