BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0119800 Os02g0119800|AK068133
(389 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0119800 Similar to Aminoalcoholphosphotransferase 797 0.0
Os06g0204400 Similar to Aminoalcoholphosphotransferase 518 e-147
>Os02g0119800 Similar to Aminoalcoholphosphotransferase
Length = 389
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/389 (100%), Positives = 389/389 (100%)
Query: 1 MGYVGQHGVATLRRYKYSGVDHSLVAKYILQPFWSRFVNLFPLWFPPNMITLTGFMFLLT 60
MGYVGQHGVATLRRYKYSGVDHSLVAKYILQPFWSRFVNLFPLWFPPNMITLTGFMFLLT
Sbjct: 1 MGYVGQHGVATLRRYKYSGVDHSLVAKYILQPFWSRFVNLFPLWFPPNMITLTGFMFLLT 60
Query: 61 SAFLGFFYSPHLDTAPPRWVHLAHGMLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCD 120
SAFLGFFYSPHLDTAPPRWVHLAHGMLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCD
Sbjct: 61 SAFLGFFYSPHLDTAPPRWVHLAHGMLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCD 120
Query: 121 ALACAFEALAFGSTAMCGKATFWYWFIAAVPFYCATWEHFFTNTLILPIVNGPTEGLMLI 180
ALACAFEALAFGSTAMCGKATFWYWFIAAVPFYCATWEHFFTNTLILPIVNGPTEGLMLI
Sbjct: 121 ALACAFEALAFGSTAMCGKATFWYWFIAAVPFYCATWEHFFTNTLILPIVNGPTEGLMLI 180
Query: 181 YLCHFFTFFTGAEWWAQDFRKSIPLLNWVPLVPEVPVYGIALFLMIAFAVIPTIGSNIHN 240
YLCHFFTFFTGAEWWAQDFRKSIPLLNWVPLVPEVPVYGIALFLMIAFAVIPTIGSNIHN
Sbjct: 181 YLCHFFTFFTGAEWWAQDFRKSIPLLNWVPLVPEVPVYGIALFLMIAFAVIPTIGSNIHN 240
Query: 241 VYKVVEARKGSMLLALAMLFPFGLLLAGVLVWSYLSPSDIMRNQPHLLVIGTGFAFGFLV 300
VYKVVEARKGSMLLALAMLFPFGLLLAGVLVWSYLSPSDIMRNQPHLLVIGTGFAFGFLV
Sbjct: 241 VYKVVEARKGSMLLALAMLFPFGLLLAGVLVWSYLSPSDIMRNQPHLLVIGTGFAFGFLV 300
Query: 301 GRMILAHLCDEPKGLKTGMCMSLAYFPFAIANALTARLDDGNPLVDEQLVLLMYCLFTVA 360
GRMILAHLCDEPKGLKTGMCMSLAYFPFAIANALTARLDDGNPLVDEQLVLLMYCLFTVA
Sbjct: 301 GRMILAHLCDEPKGLKTGMCMSLAYFPFAIANALTARLDDGNPLVDEQLVLLMYCLFTVA 360
Query: 361 LYMHFATSVIHEITNALGIHCFRITRKKA 389
LYMHFATSVIHEITNALGIHCFRITRKKA
Sbjct: 361 LYMHFATSVIHEITNALGIHCFRITRKKA 389
>Os06g0204400 Similar to Aminoalcoholphosphotransferase
Length = 305
Score = 518 bits (1334), Expect = e-147, Method: Compositional matrix adjust.
Identities = 249/302 (82%), Positives = 271/302 (89%), Gaps = 2/302 (0%)
Query: 1 MGYVGQHGVATLRRYKYSGVDHSLVAKYILQPFWSRFVNLFPLWFPPNMITLTGFMFLLT 60
MGY+G HGV TL+RY+YSG DHS+VAKY+LQPFWSR V LFPLW PPNMITLTGFMFL+
Sbjct: 1 MGYIGAHGVETLKRYRYSGQDHSVVAKYVLQPFWSRCVTLFPLWMPPNMITLTGFMFLVV 60
Query: 61 SAFLGFFYSPHLDTAPPRWVHLAHGMLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCD 120
SA LG+ YSPHLDTAPPRWVHLAHG+LLFLYQTFDAVDGKQARRT+SSSPLGELFDHGCD
Sbjct: 61 SALLGYIYSPHLDTAPPRWVHLAHGLLLFLYQTFDAVDGKQARRTSSSSPLGELFDHGCD 120
Query: 121 ALACAFEALAFGSTAMCGKATFWYWFIAAVPFYCATWEHFFTNTLILPIVNGPTEGLMLI 180
ALACAFEALA GST MCG+ TF +W IAAVPFY ATWEHFFTNTLILP++NGPTEGLMLI
Sbjct: 121 ALACAFEALALGSTLMCGRFTFCFWVIAAVPFYLATWEHFFTNTLILPLINGPTEGLMLI 180
Query: 181 YLCHFFTFFTGAEWWAQDFRKSIPLLNWVPL--VPEVPVYGIALFLMIAFAVIPTIGSNI 238
YL H FTF TGAEWWAQDFRKSIPLL+WVPL +P++P+Y I + LMI FAVIPTIGSN+
Sbjct: 181 YLSHSFTFLTGAEWWAQDFRKSIPLLSWVPLPFIPDIPLYIIVMILMILFAVIPTIGSNV 240
Query: 239 HNVYKVVEARKGSMLLALAMLFPFGLLLAGVLVWSYLSPSDIMRNQPHLLVIGTGFAFGF 298
NV KVVEARKGSM+LALAML PF LL GV VWSYLSPSDIMRNQPHLLVIGTGFAFG+
Sbjct: 241 SNVQKVVEARKGSMVLALAMLLPFIALLTGVAVWSYLSPSDIMRNQPHLLVIGTGFAFGY 300
Query: 299 LV 300
LV
Sbjct: 301 LV 302
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.331 0.144 0.479
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,574,726
Number of extensions: 572349
Number of successful extensions: 1176
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1175
Number of HSP's successfully gapped: 2
Length of query: 389
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 286
Effective length of database: 11,657,759
Effective search space: 3334119074
Effective search space used: 3334119074
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 157 (65.1 bits)