Os06g0204400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Aminoalcoholphosphotransferase.
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Os06g0204400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Aminoalcoholphosphotransferase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.44 | 0.432 | 11.6 | -1.95 | 0.793 | -0.939 | 2.11 | 2.63 | -0.258 | 4.57 | 7.81 | 1412 | -- | -- |
| 94.45 | 0.453 | 11.6 | -1.68 | 0.786 | -0.813 | 2.15 | -- | -0.188 | 5.01 | 20 | 1351 | -- | -- |
| 95.44 | 0.455 | 11.6 | -2 | 0.838 | -0.968 | -- | 2.94 | -0.285 | 4.27 | 7.689 | 1450 | -- | -- |
| 104.11 | 0.475 | 11.6 | -1.7 | 0.903 | -0.998 | -- | -- | -0.213 | 6.13 | 29.9 | 1229 | -- | -- |
| 130.29 | 0.532 | 11.6 | -1.95 | -- | -1.06 | -- | 2.4 | -0.255 | -- | 7.634 | 1399 | -- | -- |
| 115.9 | 0.505 | 11.5 | -1.56 | 0.815 | -- | 2.14 | -- | 0.00129 | 4.44 | -- | -- | -- | -- |
| 128.29 | 0.53 | 11.5 | -1.57 | 0.831 | -- | -- | -- | -0.0101 | 4.54 | -- | -- | -- | -- |
| 137.98 | 0.547 | 11.6 | -1.67 | -- | -0.907 | -- | -- | -0.239 | -- | 20 | 1370 | -- | -- |
| 181.14 | 0.627 | 11.6 | -- | 0.864 | -0.879 | -- | -- | -0.195 | 6.03 | 20 | 1250 | -- | -- |
| 165.12 | 0.6 | 11.6 | -1.54 | -- | -- | -- | -- | 0.0118 | -- | -- | -- | -- | -- |
| 193.52 | 0.651 | 11.5 | -- | 0.801 | -- | -- | -- | 0.165 | 4.59 | -- | -- | -- | -- |
| 205.83 | 0.668 | 11.5 | -- | -- | -0.714 | -- | -- | -0.0575 | -- | 10 | 1387 | -- | -- |
| 227.76 | 0.704 | 11.5 | -- | -- | -- | -- | -- | 0.183 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.59 | humidity | 70 | 1440 | > th | dose dependent | rect. | 8 | 6 |
| 5 | 83.57 | humidity | 70 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 6 | 83.78 | humidity | 90 | 1440 | < th | dose dependent | rect. | 1 | 13 |
| 17 | 84.11 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 23 | 84.32 | humidity | 90 | 1440 | < th | dose dependent | sin | 4 | NA |
| 30 | 84.46 | humidity | 60 | 1440 | > th | dose dependent | rect. | 5 | 9 |
| 36 | 84.58 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 22 |
| 50 | 84.69 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 9 |
| 57 | 84.76 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 72 | 84.86 | radiation | 10 | 1440 | < th | dose dependent | sin | 22 | NA |
| 86 | 85.01 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 103 | 85.10 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 17 |
| 104 | 85.10 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 19 |
| 121 | 85.17 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 15 |
| 131 | 85.26 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 133 | 85.29 | humidity | 80 | 1440 | > th | dose independent | sin | 4 | NA |
| 162 | 85.43 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 195 | 85.64 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 205 | 85.68 | humidity | 50 | 1440 | > th | dose dependent | sin | 3 | NA |
| 252 | 85.99 | humidity | 80 | 1440 | < th | dose independent | sin | 4 | NA |
| 295 | 86.27 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 296 | 86.28 | radiation | 10 | 1440 | < th | dose dependent | rect. | 22 | 19 |
| 297 | 86.29 | radiation | 10 | 1440 | < th | dose dependent | rect. | 24 | 17 |
| 310 | 86.33 | radiation | 10 | 1440 | < th | dose dependent | rect. | 2 | 15 |
| 316 | 86.36 | humidity | 80 | 720 | > th | dose dependent | sin | 22 | NA |
| 357 | 86.50 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 22 |
| 378 | 86.55 | radiation | 10 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 382 | 86.56 | radiation | 10 | 1440 | < th | dose dependent | no | NA | NA |
| 476 | 86.96 | radiation | 10 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 506 | 87.10 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 510 | 87.11 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 19 |
| 555 | 87.28 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 767 | 88.04 | humidity | 80 | 720 | > th | dose independent | rect. | 5 | 19 |
| 784 | 88.12 | humidity | 80 | 720 | > th | dose independent | rect. | 5 | 17 |
| 788 | 88.14 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 812 | 88.28 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 839 | 88.37 | radiation | 10 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 845 | 88.41 | radiation | 10 | 1440 | > th | dose independent | rect. | 6 | 11 |
| 861 | 88.43 | radiation | 10 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 917 | 88.70 | radiation | 10 | 1440 | > th | dose independent | sin | 1 | NA |
| 967 | 88.81 | radiation | 10 | 1440 | < th | dose dependent | sin | 14 | NA |