Os02g0119800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Aminoalcoholphosphotransferase.
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Os02g0119800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Aminoalcoholphosphotransferase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.45 | 0.34 | 10.8 | -1.09 | 1.04 | -0.0496 | -0.506 | 4.3 | -0.0277 | 8.11 | 30 | 2665 | -- | -- |
| 53.66 | 0.341 | 10.9 | -1.93 | 1.05 | 0.527 | -0.642 | -- | -0.0818 | 8.03 | 32.89 | 4098 | -- | -- |
| 52.69 | 0.338 | 10.8 | -1.13 | 1.05 | -0.0824 | -- | 4.68 | -0.0502 | 8.13 | 31.46 | 2629 | -- | -- |
| 54.25 | 0.343 | 10.9 | -1.93 | 1.05 | 0.544 | -- | -- | -0.0608 | 8.09 | 32.6 | 4092 | -- | -- |
| 112.12 | 0.493 | 10.8 | -0.915 | -- | -0.274 | -- | 6.04 | -0.0443 | -- | 31.14 | 2753 | -- | -- |
| 62.38 | 0.37 | 10.9 | -1.78 | 1.05 | -- | -0.528 | -- | -0.138 | 7.94 | -- | -- | -- | -- |
| 63.19 | 0.372 | 10.9 | -1.79 | 1.05 | -- | -- | -- | -0.137 | 7.9 | -- | -- | -- | -- |
| 112.19 | 0.493 | 11 | -1.91 | -- | 0.45 | -- | -- | -0.0979 | -- | 32 | 5781 | -- | -- |
| 146.67 | 0.564 | 10.9 | -- | 1.03 | 0.191 | -- | -- | 0.101 | 8.09 | 32.7 | 4026 | -- | -- |
| 122.77 | 0.518 | 11 | -1.78 | -- | -- | -- | -- | -0.123 | -- | -- | -- | -- | -- |
| 147.76 | 0.569 | 10.9 | -- | 1.03 | -- | -- | -- | 0.0621 | 8.02 | -- | -- | -- | -- |
| 160.87 | 0.591 | 10.8 | -- | -- | -0.98 | -- | -- | 0.461 | -- | 26.22 | 47520 | -- | -- |
| 206.33 | 0.67 | 10.9 | -- | -- | -- | -- | -- | 0.0741 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.92 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 15 | 52.09 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 17 | 52.14 | temperature | 30 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 33 | 52.25 | humidity | 50 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 36 | 52.31 | humidity | 50 | 14400 | < th | dose dependent | rect. | 17 | 17 |
| 38 | 52.38 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 40 | 52.43 | temperature | 30 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 48 | 52.44 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 57 | 52.47 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 18 |
| 59 | 52.48 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 61 | 52.49 | temperature | 30 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 66 | 52.49 | temperature | 30 | 4320 | < th | dose independent | rect. | 17 | 6 |
| 77 | 52.49 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 16 |
| 81 | 52.50 | temperature | 30 | 1440 | > th | dose independent | sin | 8 | NA |
| 107 | 52.53 | temperature | 30 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 115 | 52.55 | temperature | 30 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 127 | 52.59 | temperature | 30 | 4320 | < th | dose independent | rect. | 17 | 10 |
| 132 | 52.60 | temperature | 30 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 141 | 52.62 | temperature | 30 | 1440 | < th | dose independent | sin | 8 | NA |
| 150 | 52.64 | temperature | 30 | 4320 | > th | dose dependent | sin | 13 | NA |
| 211 | 52.69 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 213 | 52.69 | temperature | 25 | 1440 | > th | dose dependent | rect. | 2 | 6 |
| 217 | 52.70 | temperature | 30 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 220 | 52.70 | temperature | 30 | 4320 | > th | dose dependent | rect. | 13 | 6 |
| 322 | 52.75 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 340 | 52.76 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 18 |
| 369 | 52.79 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 394 | 52.80 | temperature | 30 | 1440 | > th | dose dependent | rect. | 8 | 6 |
| 413 | 52.81 | temperature | 30 | 4320 | > th | dose dependent | no | NA | NA |
| 551 | 52.85 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 633 | 52.92 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 9 |
| 656 | 52.93 | temperature | 30 | 1440 | > th | dose dependent | sin | 6 | NA |
| 660 | 52.94 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 675 | 52.96 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 676 | 52.96 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 697 | 52.98 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 768 | 53.01 | wind | 7 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 772 | 53.02 | temperature | 30 | 4320 | < th | dose independent | sin | 11 | NA |
| 831 | 53.06 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 837 | 53.06 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 872 | 53.09 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 876 | 53.09 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 894 | 53.11 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 9 |
| 898 | 53.12 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 9 |
| 900 | 53.12 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 13 |
| 904 | 53.12 | temperature | 25 | 4320 | > th | dose dependent | rect. | 20 | 1 |